RNA–Protein interactions for RNA: ENST00000414712.2

PEX13-203, Transcript of peroxisomal biogenesis factor 13, humanhuman

TSL 1 (best) BASIC

Gene PEX13, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX13-203ENST00000414712 NISCHQ9Y2I1 1504 aa35.55■■■■□ 3.28
PEX13-203ENST00000414712 ABCC9O60706 1549 aa32.36■■■□□ 2.77
PEX13-203ENST00000414712 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
PEX13-203ENST00000414712 RB1CC1Q8TDY2 1594 aa30.72■■■□□ 2.51
PEX13-203ENST00000414712 DNAJC5BQ9UF47 199 aa30.71■■■□□ 2.51
PEX13-203ENST00000414712 NACADO15069 1562 aa30.45■■■□□ 2.47
PEX13-203ENST00000414712 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.4
PEX13-203ENST00000414712 DCAF8L2P0C7V8 631 aa30.01■■■□□ 2.39
PEX13-203ENST00000414712 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
PEX13-203ENST00000414712 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
PEX13-203ENST00000414712 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
PEX13-203ENST00000414712 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.31
PEX13-203ENST00000414712 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
PEX13-203ENST00000414712 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
PEX13-203ENST00000414712 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
PEX13-203ENST00000414712 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
PEX13-203ENST00000414712 CECR2Q9BXF3 1484 aa29.24■■■□□ 2.27
PEX13-203ENST00000414712 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
PEX13-203ENST00000414712 SCRIBQ14160 1630 aa29.1■■■□□ 2.25
PEX13-203ENST00000414712 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
PEX13-203ENST00000414712 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
PEX13-203ENST00000414712 CUX2O14529 1486 aa28.16■■■□□ 2.1
PEX13-203ENST00000414712 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
PEX13-203ENST00000414712 ERCC6Q03468 1493 aa27.99■■■□□ 2.07
PEX13-203ENST00000414712 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
PEX13-203ENST00000414712 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
PEX13-203ENST00000414712 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
PEX13-203ENST00000414712 SMARCA4P51532 1647 aa27.79■■■□□ 2.04
PEX13-203ENST00000414712 NESP48681 1621 aa27.68■■■□□ 2.02
PEX13-203ENST00000414712 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
PEX13-203ENST00000414712 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
PEX13-203ENST00000414712 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
PEX13-203ENST00000414712 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
PEX13-203ENST00000414712 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
PEX13-203ENST00000414712 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
PEX13-203ENST00000414712 KIF21AQ7Z4S6 1674 aa27.34■■□□□ 1.97
PEX13-203ENST00000414712 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
PEX13-203ENST00000414712 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
PEX13-203ENST00000414712 MRC2Q9UBG0 1479 aa27.14■■□□□ 1.94
PEX13-203ENST00000414712 WDR62O43379 1518 aa27.11■■□□□ 1.93
PEX13-203ENST00000414712 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
PEX13-203ENST00000414712 WIZO95785 1651 aa26.97■■□□□ 1.91
PEX13-203ENST00000414712 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
PEX13-203ENST00000414712 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
PEX13-203ENST00000414712 CFTRP13569 1480 aa26.84■■□□□ 1.89
PEX13-203ENST00000414712 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
PEX13-203ENST00000414712 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
PEX13-203ENST00000414712 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
PEX13-203ENST00000414712 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
PEX13-203ENST00000414712 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
PEX13-203ENST00000414712 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
PEX13-203ENST00000414712 RIMBP3CA6NJZ7 1639 aa26.44■■□□□ 1.82
PEX13-203ENST00000414712 RIMBP3BA6NNM3 1639 aa26.44■■□□□ 1.82
PEX13-203ENST00000414712 RIMBP3Q9UFD9 1639 aa26.44■■□□□ 1.82
PEX13-203ENST00000414712 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
PEX13-203ENST00000414712 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
PEX13-203ENST00000414712 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
PEX13-203ENST00000414712 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
PEX13-203ENST00000414712 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
PEX13-203ENST00000414712 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
PEX13-203ENST00000414712 DNMBPQ6XZF7 1577 aa26.21■■□□□ 1.79
PEX13-203ENST00000414712 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.77
PEX13-203ENST00000414712 CYB5RLQ6IPT4 315 aa26.11■■□□□ 1.77
PEX13-203ENST00000414712 CHD1O14646 1710 aa26.1■■□□□ 1.77
PEX13-203ENST00000414712 AQRO60306 1485 aaKnown RBP eCLIP26.09■■□□□ 1.77
PEX13-203ENST00000414712 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
PEX13-203ENST00000414712 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
PEX13-203ENST00000414712 FBLN2P98095 1184 aa25.95■■□□□ 1.74
PEX13-203ENST00000414712 WDR97A6NE52 1622 aa25.93■■□□□ 1.74
PEX13-203ENST00000414712 TRHP20396 242 aaPredicted RBP25.92■■□□□ 1.74
PEX13-203ENST00000414712 SOGA1O94964 1423 aa25.9■■□□□ 1.74
PEX13-203ENST00000414712 RAD54L2Q9Y4B4 1467 aa25.9■■□□□ 1.74
PEX13-203ENST00000414712 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
PEX13-203ENST00000414712 CLASP1Q7Z460 1538 aa25.84■■□□□ 1.73
PEX13-203ENST00000414712 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
PEX13-203ENST00000414712 MAGI1Q96QZ7 1491 aaPredicted RBP25.81■■□□□ 1.72
PEX13-203ENST00000414712 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
PEX13-203ENST00000414712 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
PEX13-203ENST00000414712 CHMP7Q8WUX9 453 aaPredicted RBP25.76■■□□□ 1.71
PEX13-203ENST00000414712 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
PEX13-203ENST00000414712 CUX1P39880 1505 aa25.72■■□□□ 1.71
PEX13-203ENST00000414712 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
PEX13-203ENST00000414712 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
PEX13-203ENST00000414712 PBRM1Q86U86 1689 aa25.58■■□□□ 1.69
PEX13-203ENST00000414712 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
PEX13-203ENST00000414712 ABCA5Q8WWZ7 1642 aa25.51■■□□□ 1.67
PEX13-203ENST00000414712 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
PEX13-203ENST00000414712 NUP160Q12769 1436 aa25.37■■□□□ 1.65
PEX13-203ENST00000414712 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
PEX13-203ENST00000414712 ERCC6L2Q5T890 1561 aa25.34■■□□□ 1.65
PEX13-203ENST00000414712 ADAMTS12P58397 1594 aa25.33■■□□□ 1.65
PEX13-203ENST00000414712 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
PEX13-203ENST00000414712 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
PEX13-203ENST00000414712 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
PEX13-203ENST00000414712 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
PEX13-203ENST00000414712 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
PEX13-203ENST00000414712 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
PEX13-203ENST00000414712 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
PEX13-203ENST00000414712 KIF13AQ9H1H9 1805 aa25.14■■□□□ 1.61
PEX13-203ENST00000414712 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms