RNA–Protein interactions for RNA: ENST00000329623.11

C2CD2-201, Transcript of C2 calcium dependent domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene C2CD2, Length 5,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2-201ENST00000329623 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
C2CD2-201ENST00000329623 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
C2CD2-201ENST00000329623 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
C2CD2-201ENST00000329623 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
C2CD2-201ENST00000329623 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
C2CD2-201ENST00000329623 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
C2CD2-201ENST00000329623 PCGF6Q9BYE7 350 aa17.85■□□□□ 0.45
C2CD2-201ENST00000329623 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
C2CD2-201ENST00000329623 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
C2CD2-201ENST00000329623 TTBK1Q5TCY1 1321 aaPredicted RBP17.69■□□□□ 0.42
C2CD2-201ENST00000329623 APLP2Q06481 763 aa17.64■□□□□ 0.41
C2CD2-201ENST00000329623 MYT1Q01538 1121 aa17.57■□□□□ 0.4
C2CD2-201ENST00000329623 FAM9AQ8IZU1 332 aaPredicted RBP17.57■□□□□ 0.4
C2CD2-201ENST00000329623 CCER1Q8TC90 406 aaPredicted RBP17.52■□□□□ 0.39
C2CD2-201ENST00000329623 ZEB1P37275 1124 aaPredicted RBP17.47■□□□□ 0.39
C2CD2-201ENST00000329623 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
C2CD2-201ENST00000329623 NEFLP07196 543 aa17.23■□□□□ 0.35
C2CD2-201ENST00000329623 RANGAP1P46060 587 aaPredicted RBP17.22■□□□□ 0.35
C2CD2-201ENST00000329623 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
C2CD2-201ENST00000329623 HRCP23327 699 aa17■□□□□ 0.31
C2CD2-201ENST00000329623 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
C2CD2-201ENST00000329623 ATP1B4Q9UN42 357 aaPredicted RBP16.97■□□□□ 0.31
C2CD2-201ENST00000329623 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
C2CD2-201ENST00000329623 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
C2CD2-201ENST00000329623 DAXXQ9UER7 740 aaPredicted RBP16.79■□□□□ 0.28
C2CD2-201ENST00000329623 POLR3GLQ9BT43 218 aa16.59■□□□□ 0.25
C2CD2-201ENST00000329623 RTL5Q5HYW3 569 aaPredicted RBP16.57■□□□□ 0.24
C2CD2-201ENST00000329623 LOC105371045A0A1W2PR82 267 aa16.56■□□□□ 0.24
C2CD2-201ENST00000329623 ITGAEP38570 1179 aa16.56■□□□□ 0.24
C2CD2-201ENST00000329623 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
C2CD2-201ENST00000329623 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
C2CD2-201ENST00000329623 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
C2CD2-201ENST00000329623 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
C2CD2-201ENST00000329623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
C2CD2-201ENST00000329623 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.22
C2CD2-201ENST00000329623 BCANQ96GW7 911 aa16.42■□□□□ 0.22
C2CD2-201ENST00000329623 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
C2CD2-201ENST00000329623 CLSPNQ9HAW4 1339 aa16.31■□□□□ 0.2
C2CD2-201ENST00000329623 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
C2CD2-201ENST00000329623 MYT1LQ9UL68 1186 aa16.15■□□□□ 0.18
C2CD2-201ENST00000329623 ACIN1Q9UKV3 1341 aaKnown RBP16.14■□□□□ 0.17
C2CD2-201ENST00000329623 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
C2CD2-201ENST00000329623 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
C2CD2-201ENST00000329623 ANP32CO43423 234 aa16.02■□□□□ 0.16
C2CD2-201ENST00000329623 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
C2CD2-201ENST00000329623 EIF5BO60841 1220 aaKnown RBP15.98■□□□□ 0.15
C2CD2-201ENST00000329623 TRIM52Q96A61 297 aa15.94■□□□□ 0.14
C2CD2-201ENST00000329623 ANP32AP39687 249 aaKnown RBP15.93■□□□□ 0.14
C2CD2-201ENST00000329623 NPM2Q86SE8 214 aaKnown RBP15.92■□□□□ 0.14
C2CD2-201ENST00000329623 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
C2CD2-201ENST00000329623 BCL11AQ9H165 835 aa15.85■□□□□ 0.13
C2CD2-201ENST00000329623 FKBP8Q14318 412 aa15.83■□□□□ 0.12
C2CD2-201ENST00000329623 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
C2CD2-201ENST00000329623 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
C2CD2-201ENST00000329623 NBR1Q14596 966 aa15.74■□□□□ 0.11
C2CD2-201ENST00000329623 SCAF1Q9H7N4 1312 aaKnown RBP15.74■□□□□ 0.11
C2CD2-201ENST00000329623 GLIPR1L2Q4G1C9 344 aa15.69■□□□□ 0.1
C2CD2-201ENST00000329623 ANP32BQ92688 251 aaKnown RBP15.64■□□□□ 0.09
C2CD2-201ENST00000329623 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
C2CD2-201ENST00000329623 ARXQ96QS3 562 aa15.59■□□□□ 0.09
C2CD2-201ENST00000329623 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.09
C2CD2-201ENST00000329623 ABCC9O60706 1549 aa15.58■□□□□ 0.08
C2CD2-201ENST00000329623 HSP90AA1P07900 732 aaKnown RBP15.55■□□□□ 0.08
C2CD2-201ENST00000329623 FAM9BQ8IZU0 186 aa15.53■□□□□ 0.08
C2CD2-201ENST00000329623 DDX10Q13206 875 aaKnown RBP15.51■□□□□ 0.07
C2CD2-201ENST00000329623 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
C2CD2-201ENST00000329623 UPF2Q9HAU5 1272 aaKnown RBP15.48■□□□□ 0.07
C2CD2-201ENST00000329623 CCDC136Q96JN2 1154 aa15.47■□□□□ 0.07
C2CD2-201ENST00000329623 NEFMP07197 916 aa15.47■□□□□ 0.07
C2CD2-201ENST00000329623 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
C2CD2-201ENST00000329623 MIER1Q8N108 512 aa15.44■□□□□ 0.06
C2CD2-201ENST00000329623 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
C2CD2-201ENST00000329623 ANP32EQ9BTT0 268 aa15.42■□□□□ 0.06
C2CD2-201ENST00000329623 ARID3CA6NKF2 412 aa15.41■□□□□ 0.06
C2CD2-201ENST00000329623 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
C2CD2-201ENST00000329623 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
C2CD2-201ENST00000329623 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
C2CD2-201ENST00000329623 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
C2CD2-201ENST00000329623 ZNF777Q9ULD5 760 aaPredicted RBP15.31■□□□□ 0.04
C2CD2-201ENST00000329623 RTN4Q9NQC3 1192 aaKnown RBP15.3■□□□□ 0.04
C2CD2-201ENST00000329623 TMC1Q8TDI8 760 aa15.28■□□□□ 0.04
C2CD2-201ENST00000329623 MRS2Q9HD23 443 aa15.28■□□□□ 0.04
C2CD2-201ENST00000329623 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.27■□□□□ 0.03
C2CD2-201ENST00000329623 HIRIP3Q9BW71 556 aaPredicted RBP15.26■□□□□ 0.03
C2CD2-201ENST00000329623 FBLN2P98095 1184 aa15.24■□□□□ 0.03
C2CD2-201ENST00000329623 DDRGK1Q96HY6 314 aa15.23■□□□□ 0.03
C2CD2-201ENST00000329623 TRIM44Q96DX7 344 aaPredicted RBP15.22■□□□□ 0.03
C2CD2-201ENST00000329623 CCDC180Q9P1Z9 1646 aa15.22■□□□□ 0.03
C2CD2-201ENST00000329623 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
C2CD2-201ENST00000329623 BECN1Q14457 450 aa15.16■□□□□ 0.02
C2CD2-201ENST00000329623 LAS1LQ9Y4W2 734 aaKnown RBP15.16■□□□□ 0.02
C2CD2-201ENST00000329623 NAP1L5Q96NT1 182 aaPredicted RBP15.15■□□□□ 0.02
C2CD2-201ENST00000329623 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
C2CD2-201ENST00000329623 SENP3-EIF4A1A0A087X0R7 540 aa15.13■□□□□ 0.01
C2CD2-201ENST00000329623 CHIC2Q9UKJ5 165 aa15.13■□□□□ 0.01
C2CD2-201ENST00000329623 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
C2CD2-201ENST00000329623 SUPT16HQ9Y5B9 1047 aaKnown RBP15.12■□□□□ 0.01
C2CD2-201ENST00000329623 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
C2CD2-201ENST00000329623 TNNT2P45379 298 aaPredicted RBP15.11■□□□□ 0.01
C2CD2-201ENST00000329623 NCLP19338 710 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms