RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
CPEB1-216ENST00000618449 CCDC180Q9P1Z9 1646 aa21.96■■□□□ 1.11
CPEB1-216ENST00000618449 ZCCHC6Q5VYS8 1495 aaKnown RBP21.24■□□□□ 0.99
CPEB1-216ENST00000618449 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
CPEB1-216ENST00000618449 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
CPEB1-216ENST00000618449 ABCC9O60706 1549 aa20.79■□□□□ 0.92
CPEB1-216ENST00000618449 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
CPEB1-216ENST00000618449 MYO15BQ96JP2 1530 aa20.57■□□□□ 0.88
CPEB1-216ENST00000618449 NACADO15069 1562 aa20.45■□□□□ 0.86
CPEB1-216ENST00000618449 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
CPEB1-216ENST00000618449 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
CPEB1-216ENST00000618449 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
CPEB1-216ENST00000618449 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
CPEB1-216ENST00000618449 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
CPEB1-216ENST00000618449 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
CPEB1-216ENST00000618449 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
CPEB1-216ENST00000618449 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
CPEB1-216ENST00000618449 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
CPEB1-216ENST00000618449 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
CPEB1-216ENST00000618449 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
CPEB1-216ENST00000618449 WIZO95785 1651 aa19.39■□□□□ 0.7
CPEB1-216ENST00000618449 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
CPEB1-216ENST00000618449 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
CPEB1-216ENST00000618449 CHIC1Q5VXU3 224 aa19.14■□□□□ 0.66
CPEB1-216ENST00000618449 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
CPEB1-216ENST00000618449 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
CPEB1-216ENST00000618449 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
CPEB1-216ENST00000618449 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
CPEB1-216ENST00000618449 BAZ1BQ9UIG0 1483 aaKnown RBP18.98■□□□□ 0.63
CPEB1-216ENST00000618449 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
CPEB1-216ENST00000618449 HMGXB3Q12766 1538 aa18.86■□□□□ 0.61
CPEB1-216ENST00000618449 CC2D2AQ9P2K1 1620 aa18.79■□□□□ 0.6
CPEB1-216ENST00000618449 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
CPEB1-216ENST00000618449 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
CPEB1-216ENST00000618449 CFTRP13569 1480 aa18.51■□□□□ 0.55
CPEB1-216ENST00000618449 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
CPEB1-216ENST00000618449 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
CPEB1-216ENST00000618449 LOC105371045A0A1W2PR82 267 aa18.45■□□□□ 0.54
CPEB1-216ENST00000618449 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
CPEB1-216ENST00000618449 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
CPEB1-216ENST00000618449 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
CPEB1-216ENST00000618449 PRDM2Q13029 1718 aa18.36■□□□□ 0.53
CPEB1-216ENST00000618449 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
CPEB1-216ENST00000618449 SOGA1O94964 1423 aa18.31■□□□□ 0.52
CPEB1-216ENST00000618449 NESP48681 1621 aa18.29■□□□□ 0.52
CPEB1-216ENST00000618449 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
CPEB1-216ENST00000618449 CUX1P39880 1505 aa18.27■□□□□ 0.52
CPEB1-216ENST00000618449 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
CPEB1-216ENST00000618449 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
CPEB1-216ENST00000618449 FANCD2Q9BXW9 1451 aa18.23■□□□□ 0.51
CPEB1-216ENST00000618449 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
CPEB1-216ENST00000618449 EEA1Q15075 1411 aa18.22■□□□□ 0.51
CPEB1-216ENST00000618449 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
CPEB1-216ENST00000618449 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
CPEB1-216ENST00000618449 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
CPEB1-216ENST00000618449 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
CPEB1-216ENST00000618449 DNMBPQ6XZF7 1577 aa18.06■□□□□ 0.48
CPEB1-216ENST00000618449 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
CPEB1-216ENST00000618449 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
CPEB1-216ENST00000618449 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
CPEB1-216ENST00000618449 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
CPEB1-216ENST00000618449 GOLGA3Q08378 1498 aa18■□□□□ 0.47
CPEB1-216ENST00000618449 KIF21BO75037 1637 aa17.99■□□□□ 0.47
CPEB1-216ENST00000618449 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
CPEB1-216ENST00000618449 TNIKQ9UKE5 1360 aa17.96■□□□□ 0.47
CPEB1-216ENST00000618449 CUX2O14529 1486 aa17.96■□□□□ 0.47
CPEB1-216ENST00000618449 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
CPEB1-216ENST00000618449 RAD54L2Q9Y4B4 1467 aa17.93■□□□□ 0.46
CPEB1-216ENST00000618449 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
CPEB1-216ENST00000618449 PRXQ9BXM0 1461 aa17.91■□□□□ 0.46
CPEB1-216ENST00000618449 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
CPEB1-216ENST00000618449 CEP162Q5TB80 1403 aa17.88■□□□□ 0.45
CPEB1-216ENST00000618449 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
CPEB1-216ENST00000618449 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
CPEB1-216ENST00000618449 IGF1RP08069 1367 aa17.86■□□□□ 0.45
CPEB1-216ENST00000618449 ERICH3Q5RHP9 1530 aa17.86■□□□□ 0.45
CPEB1-216ENST00000618449 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
CPEB1-216ENST00000618449 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
CPEB1-216ENST00000618449 HRCP23327 699 aa17.79■□□□□ 0.44
CPEB1-216ENST00000618449 WDR62O43379 1518 aa17.77■□□□□ 0.43
CPEB1-216ENST00000618449 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.43
CPEB1-216ENST00000618449 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
CPEB1-216ENST00000618449 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
CPEB1-216ENST00000618449 CLIP1P30622 1438 aa17.73■□□□□ 0.43
CPEB1-216ENST00000618449 ABCA5Q8WWZ7 1642 aa17.73■□□□□ 0.43
CPEB1-216ENST00000618449 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
CPEB1-216ENST00000618449 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.42
CPEB1-216ENST00000618449 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
CPEB1-216ENST00000618449 RANGAP1P46060 587 aaPredicted RBP17.7■□□□□ 0.42
CPEB1-216ENST00000618449 CUL7Q14999 1698 aa17.67■□□□□ 0.42
CPEB1-216ENST00000618449 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
CPEB1-216ENST00000618449 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■■□ 20
CPEB1-216ENST00000618449 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
CPEB1-216ENST00000618449 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
CPEB1-216ENST00000618449 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
CPEB1-216ENST00000618449 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.4
CPEB1-216ENST00000618449 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
CPEB1-216ENST00000618449 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
CPEB1-216ENST00000618449 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
CPEB1-216ENST00000618449 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms