RNA–Protein interactions for RNA: ENST00000563079.1

LINC02533-201, Transcript of long intergenic non-protein coding RNA 2533, humanhuman

TSL 4 BASIC

Gene LINC02533, Length 2,272 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02533-201ENST00000563079 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
LINC02533-201ENST00000563079 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
LINC02533-201ENST00000563079 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
LINC02533-201ENST00000563079 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
LINC02533-201ENST00000563079 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
LINC02533-201ENST00000563079 FOXD1Q16676 465 aa19.31■□□□□ 0.68
LINC02533-201ENST00000563079 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
LINC02533-201ENST00000563079 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
LINC02533-201ENST00000563079 ADRA2BP18089 450 aa18.75■□□□□ 0.59
LINC02533-201ENST00000563079 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
LINC02533-201ENST00000563079 MSH5O43196 834 aa17.66■□□□□ 0.42
LINC02533-201ENST00000563079 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
LINC02533-201ENST00000563079 KCNA4P22459 653 aa17.32■□□□□ 0.36
LINC02533-201ENST00000563079 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
LINC02533-201ENST00000563079 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
LINC02533-201ENST00000563079 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
LINC02533-201ENST00000563079 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
LINC02533-201ENST00000563079 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
LINC02533-201ENST00000563079 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
LINC02533-201ENST00000563079 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
LINC02533-201ENST00000563079 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
LINC02533-201ENST00000563079 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
LINC02533-201ENST00000563079 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
LINC02533-201ENST00000563079 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
LINC02533-201ENST00000563079 DNAJC5BQ9UF47 199 aa16.28■□□□□ 0.2
LINC02533-201ENST00000563079 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
LINC02533-201ENST00000563079 ABCC9O60706 1549 aa16.03■□□□□ 0.16
LINC02533-201ENST00000563079 ZBTB22O15209 634 aa15.97■□□□□ 0.15
LINC02533-201ENST00000563079 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
LINC02533-201ENST00000563079 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
LINC02533-201ENST00000563079 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
LINC02533-201ENST00000563079 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
LINC02533-201ENST00000563079 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
LINC02533-201ENST00000563079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC02533-201ENST00000563079 DCAF1Q9Y4B6 1507 aa15.54■□□□□ 0.08
LINC02533-201ENST00000563079 DCAF8L2P0C7V8 631 aa15.51■□□□□ 0.07
LINC02533-201ENST00000563079 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
LINC02533-201ENST00000563079 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
LINC02533-201ENST00000563079 MYO15BQ96JP2 1530 aa15.44■□□□□ 0.06
LINC02533-201ENST00000563079 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
LINC02533-201ENST00000563079 NACADO15069 1562 aa15.38■□□□□ 0.05
LINC02533-201ENST00000563079 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
LINC02533-201ENST00000563079 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
LINC02533-201ENST00000563079 ATXN8OSP0DMR3 200 aa15.25■□□□□ 0.03
LINC02533-201ENST00000563079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
LINC02533-201ENST00000563079 MYT1Q01538 1121 aa15.22■□□□□ 0.03
LINC02533-201ENST00000563079 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
LINC02533-201ENST00000563079 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
LINC02533-201ENST00000563079 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
LINC02533-201ENST00000563079 SUPT5HO00267 1087 aaKnown RBP15.15■□□□□ 0.02
LINC02533-201ENST00000563079 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
LINC02533-201ENST00000563079 HRCP23327 699 aa15.12■□□□□ 0.01
LINC02533-201ENST00000563079 SCRIBQ14160 1630 aa15.08■□□□□ 0.01
LINC02533-201ENST00000563079 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
LINC02533-201ENST00000563079 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
LINC02533-201ENST00000563079 APLP2Q06481 763 aa14.97□□□□□ -0.01
LINC02533-201ENST00000563079 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
LINC02533-201ENST00000563079 BICRAQ9NZM4 1560 aa14.87□□□□□ -0.03
LINC02533-201ENST00000563079 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.03
LINC02533-201ENST00000563079 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
LINC02533-201ENST00000563079 CAPN15O75808 1086 aa14.81□□□□□ -0.04
LINC02533-201ENST00000563079 TRHP20396 242 aaPredicted RBP14.8□□□□□ -0.04
LINC02533-201ENST00000563079 PCGF6Q9BYE7 350 aa14.75□□□□□ -0.05
LINC02533-201ENST00000563079 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
LINC02533-201ENST00000563079 POLA2Q14181 598 aa14.63□□□□□ -0.07
LINC02533-201ENST00000563079 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
LINC02533-201ENST00000563079 CACNB1Q02641 598 aaPredicted RBP14.6□□□□□ -0.07
LINC02533-201ENST00000563079 ABCB7O75027 752 aa14.58□□□□□ -0.08
LINC02533-201ENST00000563079 PPARGC1BQ86YN6 1023 aaKnown RBP14.57□□□□□ -0.08
LINC02533-201ENST00000563079 TRIM26Q12899 539 aaPredicted RBP14.55□□□□□ -0.08
LINC02533-201ENST00000563079 DSG3P32926 999 aa14.54□□□□□ -0.08
LINC02533-201ENST00000563079 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
LINC02533-201ENST00000563079 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
LINC02533-201ENST00000563079 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
LINC02533-201ENST00000563079 LOC105371045A0A1W2PR82 267 aa14.49□□□□□ -0.09
LINC02533-201ENST00000563079 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
LINC02533-201ENST00000563079 MKRN4PQ13434 485 aaPredicted RBP14.48□□□□□ -0.09
LINC02533-201ENST00000563079 SMARCA4P51532 1647 aa14.46□□□□□ -0.09
LINC02533-201ENST00000563079 ZEB1P37275 1124 aaPredicted RBP14.45□□□□□ -0.1
LINC02533-201ENST00000563079 FKBP8Q14318 412 aa14.45□□□□□ -0.1
LINC02533-201ENST00000563079 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
LINC02533-201ENST00000563079 FBLN2P98095 1184 aa14.39□□□□□ -0.11
LINC02533-201ENST00000563079 WIZO95785 1651 aa14.35□□□□□ -0.11
LINC02533-201ENST00000563079 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
LINC02533-201ENST00000563079 PEG3Q9GZU2 1588 aa14.32□□□□□ -0.12
LINC02533-201ENST00000563079 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
LINC02533-201ENST00000563079 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
LINC02533-201ENST00000563079 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
LINC02533-201ENST00000563079 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
LINC02533-201ENST00000563079 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
LINC02533-201ENST00000563079 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
LINC02533-201ENST00000563079 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
LINC02533-201ENST00000563079 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
LINC02533-201ENST00000563079 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
LINC02533-201ENST00000563079 HMGXB3Q12766 1538 aa14.16□□□□□ -0.14
LINC02533-201ENST00000563079 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
LINC02533-201ENST00000563079 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
LINC02533-201ENST00000563079 PROM2Q8N271 834 aa14.05□□□□□ -0.16
LINC02533-201ENST00000563079 SPDYE2BA6NHP3 402 aa14.01□□□□□ -0.17
LINC02533-201ENST00000563079 SPDYE6P0CI01 402 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms