RNA–Protein interactions for RNA: ENST00000535432.2

E2F3-202, Transcript of E2F transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene E2F3, Length 4,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3-202ENST00000535432 NISCHQ9Y2I1 1504 aa18.73■□□□□ 0.59
E2F3-202ENST00000535432 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
E2F3-202ENST00000535432 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
E2F3-202ENST00000535432 SHROOM4Q9ULL8 1493 aa16.88■□□□□ 0.29
E2F3-202ENST00000535432 PCGF6Q9BYE7 350 aa15.82■□□□□ 0.12
E2F3-202ENST00000535432 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
E2F3-202ENST00000535432 MYT1Q01538 1121 aa15.77■□□□□ 0.12
E2F3-202ENST00000535432 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
E2F3-202ENST00000535432 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
E2F3-202ENST00000535432 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
E2F3-202ENST00000535432 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
E2F3-202ENST00000535432 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
E2F3-202ENST00000535432 CCDC180Q9P1Z9 1646 aa15.64■□□□□ 0.09
E2F3-202ENST00000535432 ZEB1P37275 1124 aaPredicted RBP15.51■□□□□ 0.07
E2F3-202ENST00000535432 APLP2Q06481 763 aa15.46■□□□□ 0.07
E2F3-202ENST00000535432 HRCP23327 699 aa15.44■□□□□ 0.06
E2F3-202ENST00000535432 LOC105371045A0A1W2PR82 267 aa15.44■□□□□ 0.06
E2F3-202ENST00000535432 TRIM26Q12899 539 aaPredicted RBP15.43■□□□□ 0.06
E2F3-202ENST00000535432 ABCC9O60706 1549 aa15.34■□□□□ 0.05
E2F3-202ENST00000535432 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
E2F3-202ENST00000535432 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
E2F3-202ENST00000535432 CCER1Q8TC90 406 aaPredicted RBP15.26■□□□□ 0.03
E2F3-202ENST00000535432 PPARGC1BQ86YN6 1023 aaKnown RBP15.13■□□□□ 0.01
E2F3-202ENST00000535432 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
E2F3-202ENST00000535432 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
E2F3-202ENST00000535432 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
E2F3-202ENST00000535432 CENPBP07199 599 aaPredicted RBP15.02■□□□□ -0
E2F3-202ENST00000535432 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
E2F3-202ENST00000535432 MYO15BQ96JP2 1530 aa14.94□□□□□ -0.02
E2F3-202ENST00000535432 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
E2F3-202ENST00000535432 NACADO15069 1562 aa14.86□□□□□ -0.03
E2F3-202ENST00000535432 ATP1B4Q9UN42 357 aaPredicted RBP14.84□□□□□ -0.03
E2F3-202ENST00000535432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
E2F3-202ENST00000535432 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
E2F3-202ENST00000535432 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
E2F3-202ENST00000535432 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
E2F3-202ENST00000535432 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
E2F3-202ENST00000535432 DIEXFQ68CQ4 756 aaKnown RBP14.64□□□□□ -0.07
E2F3-202ENST00000535432 ITGAEP38570 1179 aa14.62□□□□□ -0.07
E2F3-202ENST00000535432 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
E2F3-202ENST00000535432 ERICH6Q7L0X2 663 aa14.6□□□□□ -0.07
E2F3-202ENST00000535432 BAZ1AQ9NRL2 1556 aaPredicted RBP14.59□□□□□ -0.07
E2F3-202ENST00000535432 EEA1Q15075 1411 aa14.54□□□□□ -0.08
E2F3-202ENST00000535432 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
E2F3-202ENST00000535432 ZNF316A6NFI3 1004 aaPredicted RBP14.46□□□□□ -0.1
E2F3-202ENST00000535432 NEFLP07196 543 aa14.42□□□□□ -0.1
E2F3-202ENST00000535432 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
E2F3-202ENST00000535432 CEP162Q5TB80 1403 aa14.41□□□□□ -0.1
E2F3-202ENST00000535432 GOLGA3Q08378 1498 aa14.4□□□□□ -0.1
E2F3-202ENST00000535432 FAM50AQ14320 339 aaKnown RBP14.4□□□□□ -0.1
E2F3-202ENST00000535432 TNIKQ9UKE5 1360 aa14.4□□□□□ -0.1
E2F3-202ENST00000535432 CLIP1P30622 1438 aa14.36□□□□□ -0.11
E2F3-202ENST00000535432 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
E2F3-202ENST00000535432 WIZO95785 1651 aa14.32□□□□□ -0.12
E2F3-202ENST00000535432 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
E2F3-202ENST00000535432 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
E2F3-202ENST00000535432 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
E2F3-202ENST00000535432 ACIN1Q9UKV3 1341 aaKnown RBP14.3□□□□□ -0.12
E2F3-202ENST00000535432 TOP2AP11388 1531 aaKnown RBP14.28□□□□□ -0.12
E2F3-202ENST00000535432 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.12
E2F3-202ENST00000535432 SOGA1O94964 1423 aa14.25□□□□□ -0.13
E2F3-202ENST00000535432 NEUROD1Q13562 356 aa14.24□□□□□ -0.13
E2F3-202ENST00000535432 P3H3Q8IVL6 736 aa14.24□□□□□ -0.13
E2F3-202ENST00000535432 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
E2F3-202ENST00000535432 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
E2F3-202ENST00000535432 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
E2F3-202ENST00000535432 TRIM52Q96A61 297 aa14.16□□□□□ -0.14
E2F3-202ENST00000535432 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
E2F3-202ENST00000535432 ANP32CO43423 234 aa14.1□□□□□ -0.15
E2F3-202ENST00000535432 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
E2F3-202ENST00000535432 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
E2F3-202ENST00000535432 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
E2F3-202ENST00000535432 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.16
E2F3-202ENST00000535432 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.17
E2F3-202ENST00000535432 CDK11AQ9UQ88 783 aaPredicted RBP14□□□□□ -0.17
E2F3-202ENST00000535432 TONSLQ96HA7 1378 aa14□□□□□ -0.17
E2F3-202ENST00000535432 MIER1Q8N108 512 aa13.99□□□□□ -0.17
E2F3-202ENST00000535432 MTUS2Q5JR59 1369 aa13.99□□□□□ -0.17
E2F3-202ENST00000535432 FBLN2P98095 1184 aa13.97□□□□□ -0.17
E2F3-202ENST00000535432 ARID3CA6NKF2 412 aa13.95□□□□□ -0.18
E2F3-202ENST00000535432 CUX2O14529 1486 aa13.94□□□□□ -0.18
E2F3-202ENST00000535432 RUSC2Q8N2Y8 1516 aa13.94□□□□□ -0.18
E2F3-202ENST00000535432 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
E2F3-202ENST00000535432 MYT1LQ9UL68 1186 aa13.93□□□□□ -0.18
E2F3-202ENST00000535432 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
E2F3-202ENST00000535432 CCNB3Q8WWL7 1395 aa13.92□□□□□ -0.18
E2F3-202ENST00000535432 FHAD1B1AJZ9 1412 aa13.91□□□□□ -0.18
E2F3-202ENST00000535432 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
E2F3-202ENST00000535432 RAPGEF2Q9Y4G8 1499 aa13.89□□□□□ -0.19
E2F3-202ENST00000535432 BCANQ96GW7 911 aa13.88□□□□□ -0.19
E2F3-202ENST00000535432 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
E2F3-202ENST00000535432 ZNF777Q9ULD5 760 aaPredicted RBP13.85□□□□□ -0.19
E2F3-202ENST00000535432 CHIC2Q9UKJ5 165 aa13.84□□□□□ -0.19
E2F3-202ENST00000535432 KANK4Q5T7N3 995 aaPredicted RBP13.84□□□□□ -0.19
E2F3-202ENST00000535432 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
E2F3-202ENST00000535432 PRKCSHP14314 528 aaPredicted RBP13.81□□□□□ -0.2
E2F3-202ENST00000535432 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
E2F3-202ENST00000535432 RRP7BPQ9NSQ0 103 aa13.76□□□□□ -0.21
E2F3-202ENST00000535432 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
E2F3-202ENST00000535432 FKBP8Q14318 412 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms