RNA–Protein interactions for RNA: ENST00000623960.3

FP565260.3-202, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FP565260.3, Length 3,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FP565260.3-202ENST00000623960 NISCHQ9Y2I1 1504 aa24.95■■□□□ 1.58
FP565260.3-202ENST00000623960 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
FP565260.3-202ENST00000623960 DCAF8L2P0C7V8 631 aa22.16■■□□□ 1.14
FP565260.3-202ENST00000623960 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
FP565260.3-202ENST00000623960 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
FP565260.3-202ENST00000623960 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
FP565260.3-202ENST00000623960 ABCC9O60706 1549 aa20.6■□□□□ 0.89
FP565260.3-202ENST00000623960 EHMT2Q96KQ7 1210 aa20.59■□□□□ 0.89
FP565260.3-202ENST00000623960 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
FP565260.3-202ENST00000623960 MYO15BQ96JP2 1530 aa20.35■□□□□ 0.85
FP565260.3-202ENST00000623960 LOC105371045A0A1W2PR82 267 aa20.34■□□□□ 0.85
FP565260.3-202ENST00000623960 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
FP565260.3-202ENST00000623960 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
FP565260.3-202ENST00000623960 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
FP565260.3-202ENST00000623960 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
FP565260.3-202ENST00000623960 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
FP565260.3-202ENST00000623960 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
FP565260.3-202ENST00000623960 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
FP565260.3-202ENST00000623960 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
FP565260.3-202ENST00000623960 PPARGC1BQ86YN6 1023 aaKnown RBP19.86■□□□□ 0.77
FP565260.3-202ENST00000623960 TTBK1Q5TCY1 1321 aaPredicted RBP19.76■□□□□ 0.75
FP565260.3-202ENST00000623960 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
FP565260.3-202ENST00000623960 MROH2BQ7Z745 1585 aa19.63■□□□□ 0.73
FP565260.3-202ENST00000623960 NACADO15069 1562 aa19.51■□□□□ 0.71
FP565260.3-202ENST00000623960 WIZO95785 1651 aa19.51■□□□□ 0.71
FP565260.3-202ENST00000623960 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
FP565260.3-202ENST00000623960 HRCP23327 699 aa19.42■□□□□ 0.7
FP565260.3-202ENST00000623960 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
FP565260.3-202ENST00000623960 TRIM26Q12899 539 aaPredicted RBP19.22■□□□□ 0.67
FP565260.3-202ENST00000623960 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
FP565260.3-202ENST00000623960 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
FP565260.3-202ENST00000623960 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
FP565260.3-202ENST00000623960 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
FP565260.3-202ENST00000623960 SOGA1O94964 1423 aa19.04■□□□□ 0.64
FP565260.3-202ENST00000623960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
FP565260.3-202ENST00000623960 SMARCA4P51532 1647 aa19.01■□□□□ 0.63
FP565260.3-202ENST00000623960 RUSC2Q8N2Y8 1516 aa19.01■□□□□ 0.63
FP565260.3-202ENST00000623960 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
FP565260.3-202ENST00000623960 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
FP565260.3-202ENST00000623960 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
FP565260.3-202ENST00000623960 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
FP565260.3-202ENST00000623960 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
FP565260.3-202ENST00000623960 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
FP565260.3-202ENST00000623960 BAZ1BQ9UIG0 1483 aaKnown RBP18.76■□□□□ 0.59
FP565260.3-202ENST00000623960 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
FP565260.3-202ENST00000623960 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
FP565260.3-202ENST00000623960 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
FP565260.3-202ENST00000623960 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
FP565260.3-202ENST00000623960 ATP1B4Q9UN42 357 aaPredicted RBP18.57■□□□□ 0.56
FP565260.3-202ENST00000623960 ITGAEP38570 1179 aa18.57■□□□□ 0.56
FP565260.3-202ENST00000623960 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
FP565260.3-202ENST00000623960 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
FP565260.3-202ENST00000623960 APLP2Q06481 763 aa18.55■□□□□ 0.56
FP565260.3-202ENST00000623960 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
FP565260.3-202ENST00000623960 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
FP565260.3-202ENST00000623960 TNIKQ9UKE5 1360 aa18.45■□□□□ 0.54
FP565260.3-202ENST00000623960 CLIP1P30622 1438 aa18.42■□□□□ 0.54
FP565260.3-202ENST00000623960 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
FP565260.3-202ENST00000623960 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
FP565260.3-202ENST00000623960 KANK4Q5T7N3 995 aaPredicted RBP18.34■□□□□ 0.53
FP565260.3-202ENST00000623960 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
FP565260.3-202ENST00000623960 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
FP565260.3-202ENST00000623960 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
FP565260.3-202ENST00000623960 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.52
FP565260.3-202ENST00000623960 EEA1Q15075 1411 aa18.24■□□□□ 0.51
FP565260.3-202ENST00000623960 NESP48681 1621 aa18.23■□□□□ 0.51
FP565260.3-202ENST00000623960 CUX1P39880 1505 aa18.22■□□□□ 0.51
FP565260.3-202ENST00000623960 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
FP565260.3-202ENST00000623960 CUX2O14529 1486 aa18.19■□□□□ 0.5
FP565260.3-202ENST00000623960 DIEXFQ68CQ4 756 aaKnown RBP18.17■□□□□ 0.5
FP565260.3-202ENST00000623960 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
FP565260.3-202ENST00000623960 VPS8Q8N3P4 1428 aa18.12■□□□□ 0.49
FP565260.3-202ENST00000623960 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
FP565260.3-202ENST00000623960 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
FP565260.3-202ENST00000623960 RAD54L2Q9Y4B4 1467 aa18.11■□□□□ 0.49
FP565260.3-202ENST00000623960 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
FP565260.3-202ENST00000623960 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
FP565260.3-202ENST00000623960 CFTRP13569 1480 aa18.08■□□□□ 0.48
FP565260.3-202ENST00000623960 KIF21BO75037 1637 aa18.08■□□□□ 0.48
FP565260.3-202ENST00000623960 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
FP565260.3-202ENST00000623960 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
FP565260.3-202ENST00000623960 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
FP565260.3-202ENST00000623960 IGF1RP08069 1367 aa18.02■□□□□ 0.47
FP565260.3-202ENST00000623960 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
FP565260.3-202ENST00000623960 HMGXB3Q12766 1538 aa18■□□□□ 0.47
FP565260.3-202ENST00000623960 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
FP565260.3-202ENST00000623960 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
FP565260.3-202ENST00000623960 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
FP565260.3-202ENST00000623960 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
FP565260.3-202ENST00000623960 HIRIP3Q9BW71 556 aaPredicted RBP17.94■□□□□ 0.46
FP565260.3-202ENST00000623960 ZNF316A6NFI3 1004 aaPredicted RBP17.93■□□□□ 0.46
FP565260.3-202ENST00000623960 MIER1Q8N108 512 aa17.91■□□□□ 0.46
FP565260.3-202ENST00000623960 FHOD3Q2V2M9 1422 aa17.91■□□□□ 0.46
FP565260.3-202ENST00000623960 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
FP565260.3-202ENST00000623960 FBLN2P98095 1184 aa17.89■□□□□ 0.45
FP565260.3-202ENST00000623960 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
FP565260.3-202ENST00000623960 PELP1Q8IZL8 1130 aaKnown RBP17.87■□□□□ 0.45
FP565260.3-202ENST00000623960 SIN3AQ96ST3 1273 aa17.85■□□□□ 0.45
FP565260.3-202ENST00000623960 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
FP565260.3-202ENST00000623960 POLA1P09884 1462 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms