RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.46
HMBOX1-201ENST00000287701 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.29
HMBOX1-201ENST00000287701 HRCP23327 699 aa16.79■□□□□ 0.28
HMBOX1-201ENST00000287701 MYT1Q01538 1121 aa16.43■□□□□ 0.22
HMBOX1-201ENST00000287701 PPARGC1BQ86YN6 1023 aaKnown RBP16.1■□□□□ 0.17
HMBOX1-201ENST00000287701 PCGF6Q9BYE7 350 aa16.05■□□□□ 0.16
HMBOX1-201ENST00000287701 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
HMBOX1-201ENST00000287701 DCAF1Q9Y4B6 1507 aa16.03■□□□□ 0.16
HMBOX1-201ENST00000287701 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
HMBOX1-201ENST00000287701 CCDC180Q9P1Z9 1646 aa15.91■□□□□ 0.14
HMBOX1-201ENST00000287701 ZEB1P37275 1124 aaPredicted RBP15.83■□□□□ 0.13
HMBOX1-201ENST00000287701 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
HMBOX1-201ENST00000287701 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.1
HMBOX1-201ENST00000287701 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
HMBOX1-201ENST00000287701 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
HMBOX1-201ENST00000287701 TTBK1Q5TCY1 1321 aaPredicted RBP15.59■□□□□ 0.09
HMBOX1-201ENST00000287701 ABCC9O60706 1549 aa15.56■□□□□ 0.08
HMBOX1-201ENST00000287701 ACIN1Q9UKV3 1341 aaKnown RBP15.55■□□□□ 0.08
HMBOX1-201ENST00000287701 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
HMBOX1-201ENST00000287701 NEUROD1Q13562 356 aa15.36■□□□□ 0.05
HMBOX1-201ENST00000287701 CENPBP07199 599 aaPredicted RBP15.34■□□□□ 0.05
HMBOX1-201ENST00000287701 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
HMBOX1-201ENST00000287701 LOC105371045A0A1W2PR82 267 aa15.25■□□□□ 0.03
HMBOX1-201ENST00000287701 DIEXFQ68CQ4 756 aaKnown RBP15.04■□□□□ -0
HMBOX1-201ENST00000287701 RB1CC1Q8TDY2 1594 aa15.02□□□□□ -0.01
HMBOX1-201ENST00000287701 BCL11AQ9H165 835 aa14.95□□□□□ -0.02
HMBOX1-201ENST00000287701 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
HMBOX1-201ENST00000287701 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
HMBOX1-201ENST00000287701 NACADO15069 1562 aa14.91□□□□□ -0.02
HMBOX1-201ENST00000287701 ANP32EQ9BTT0 268 aa14.86□□□□□ -0.03
HMBOX1-201ENST00000287701 CCER1Q8TC90 406 aaPredicted RBP14.81□□□□□ -0.04
HMBOX1-201ENST00000287701 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
HMBOX1-201ENST00000287701 FAM9AQ8IZU1 332 aaPredicted RBP14.78□□□□□ -0.04
HMBOX1-201ENST00000287701 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
HMBOX1-201ENST00000287701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
HMBOX1-201ENST00000287701 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
HMBOX1-201ENST00000287701 BICRAQ9NZM4 1560 aa14.61□□□□□ -0.07
HMBOX1-201ENST00000287701 TSHZ2Q9NRE2 1034 aa14.61□□□□□ -0.07
HMBOX1-201ENST00000287701 WRNQ14191 1432 aaPredicted RBP eCLIP14.6□□□□□ -0.07
HMBOX1-201ENST00000287701 SUPT16HQ9Y5B9 1047 aaKnown RBP14.59□□□□□ -0.07
HMBOX1-201ENST00000287701 MIER1Q8N108 512 aa14.57□□□□□ -0.08
HMBOX1-201ENST00000287701 YTHDC1Q96MU7 727 aaKnown RBP14.57□□□□□ -0.08
HMBOX1-201ENST00000287701 PRKCSHP14314 528 aaPredicted RBP14.57□□□□□ -0.08
HMBOX1-201ENST00000287701 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
HMBOX1-201ENST00000287701 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
HMBOX1-201ENST00000287701 RSF1Q96T23 1441 aaPredicted RBP14.48□□□□□ -0.09
HMBOX1-201ENST00000287701 APLP2Q06481 763 aa14.32□□□□□ -0.12
HMBOX1-201ENST00000287701 MYT1LQ9UL68 1186 aa14.3□□□□□ -0.12
HMBOX1-201ENST00000287701 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.12
HMBOX1-201ENST00000287701 CC2D2AQ9P2K1 1620 aa14.26□□□□□ -0.13
HMBOX1-201ENST00000287701 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
HMBOX1-201ENST00000287701 CEP162Q5TB80 1403 aa14.25□□□□□ -0.13
HMBOX1-201ENST00000287701 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
HMBOX1-201ENST00000287701 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
HMBOX1-201ENST00000287701 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
HMBOX1-201ENST00000287701 FANCIQ9NVI1 1328 aa14.17□□□□□ -0.14
HMBOX1-201ENST00000287701 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
HMBOX1-201ENST00000287701 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
HMBOX1-201ENST00000287701 EEA1Q15075 1411 aa14.12□□□□□ -0.15
HMBOX1-201ENST00000287701 MSH5O43196 834 aa14.1□□□□□ -0.15
HMBOX1-201ENST00000287701 SCRIBQ14160 1630 aa14.08□□□□□ -0.16
HMBOX1-201ENST00000287701 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
HMBOX1-201ENST00000287701 FKBP8Q14318 412 aa14.04□□□□□ -0.16
HMBOX1-201ENST00000287701 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
HMBOX1-201ENST00000287701 NEFLP07196 543 aa13.99□□□□□ -0.17
HMBOX1-201ENST00000287701 DHX57Q6P158 1386 aaKnown RBP13.99□□□□□ -0.17
HMBOX1-201ENST00000287701 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
HMBOX1-201ENST00000287701 DEKP35659 375 aaKnown RBP13.95□□□□□ -0.18
HMBOX1-201ENST00000287701 BCANQ96GW7 911 aa13.95□□□□□ -0.18
HMBOX1-201ENST00000287701 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
HMBOX1-201ENST00000287701 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
HMBOX1-201ENST00000287701 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
HMBOX1-201ENST00000287701 ABCC8Q09428 1581 aa13.93□□□□□ -0.18
HMBOX1-201ENST00000287701 WIZO95785 1651 aa13.92□□□□□ -0.18
HMBOX1-201ENST00000287701 CUX2O14529 1486 aa13.91□□□□□ -0.18
HMBOX1-201ENST00000287701 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
HMBOX1-201ENST00000287701 KIF21BO75037 1637 aa13.9□□□□□ -0.18
HMBOX1-201ENST00000287701 ANO8Q9HCE9 1232 aaPredicted RBP13.88□□□□□ -0.19
HMBOX1-201ENST00000287701 SOGA1O94964 1423 aa13.87□□□□□ -0.19
HMBOX1-201ENST00000287701 CCER2I3L3R5 266 aa13.87□□□□□ -0.19
HMBOX1-201ENST00000287701 UBE2Q2Q8WVN8 375 aa13.86□□□□□ -0.19
HMBOX1-201ENST00000287701 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
HMBOX1-201ENST00000287701 CLIP1P30622 1438 aa13.84□□□□□ -0.19
HMBOX1-201ENST00000287701 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
HMBOX1-201ENST00000287701 BAZ1BQ9UIG0 1483 aaKnown RBP13.83□□□□□ -0.2
HMBOX1-201ENST00000287701 KCNH8Q96L42 1107 aa13.83□□□□□ -0.2
HMBOX1-201ENST00000287701 UBTFP17480 764 aaKnown RBP13.79□□□□□ -0.2
HMBOX1-201ENST00000287701 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
HMBOX1-201ENST00000287701 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
HMBOX1-201ENST00000287701 ITGAEP38570 1179 aa13.77□□□□□ -0.2
HMBOX1-201ENST00000287701 RRBP1Q9P2E9 1410 aaKnown RBP13.75□□□□□ -0.21
HMBOX1-201ENST00000287701 RUSC2Q8N2Y8 1516 aa13.75□□□□□ -0.21
HMBOX1-201ENST00000287701 SALL2Q9Y467 1007 aaPredicted RBP13.74□□□□□ -0.21
HMBOX1-201ENST00000287701 PPP1R15AO75807 674 aaPredicted RBP13.73□□□□□ -0.21
HMBOX1-201ENST00000287701 NOP58Q9Y2X3 529 aaKnown RBP13.72□□□□□ -0.21
HMBOX1-201ENST00000287701 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
HMBOX1-201ENST00000287701 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
HMBOX1-201ENST00000287701 NCAPD3P42695 1498 aa13.68□□□□□ -0.22
HMBOX1-201ENST00000287701 PPP4R2Q9NY27 417 aa13.67□□□□□ -0.22
HMBOX1-201ENST00000287701 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms