RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
LRAT-201ENST00000336356 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
LRAT-201ENST00000336356 ABCC9O60706 1549 aa18.5■□□□□ 0.55
LRAT-201ENST00000336356 CCDC180Q9P1Z9 1646 aa18.28■□□□□ 0.52
LRAT-201ENST00000336356 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
LRAT-201ENST00000336356 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
LRAT-201ENST00000336356 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
LRAT-201ENST00000336356 MYT1Q01538 1121 aa17.69■□□□□ 0.42
LRAT-201ENST00000336356 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
LRAT-201ENST00000336356 NACADO15069 1562 aa17.66■□□□□ 0.42
LRAT-201ENST00000336356 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
LRAT-201ENST00000336356 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
LRAT-201ENST00000336356 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
LRAT-201ENST00000336356 HRCP23327 699 aa17.43■□□□□ 0.38
LRAT-201ENST00000336356 ZCCHC6Q5VYS8 1495 aaKnown RBP17.32■□□□□ 0.36
LRAT-201ENST00000336356 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.35
LRAT-201ENST00000336356 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
LRAT-201ENST00000336356 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.35
LRAT-201ENST00000336356 DCAF1Q9Y4B6 1507 aa17.2■□□□□ 0.34
LRAT-201ENST00000336356 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
LRAT-201ENST00000336356 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
LRAT-201ENST00000336356 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
LRAT-201ENST00000336356 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
LRAT-201ENST00000336356 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
LRAT-201ENST00000336356 APLP2Q06481 763 aa16.65■□□□□ 0.26
LRAT-201ENST00000336356 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
LRAT-201ENST00000336356 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
LRAT-201ENST00000336356 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
LRAT-201ENST00000336356 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
LRAT-201ENST00000336356 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
LRAT-201ENST00000336356 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
LRAT-201ENST00000336356 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
LRAT-201ENST00000336356 FBLN2P98095 1184 aa16.5■□□□□ 0.23
LRAT-201ENST00000336356 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
LRAT-201ENST00000336356 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
LRAT-201ENST00000336356 YTHDC1Q96MU7 727 aaKnown RBP16.37■□□□□ 0.21
LRAT-201ENST00000336356 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
LRAT-201ENST00000336356 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
LRAT-201ENST00000336356 TTBK1Q5TCY1 1321 aaPredicted RBP16.34■□□□□ 0.21
LRAT-201ENST00000336356 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
LRAT-201ENST00000336356 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.21
LRAT-201ENST00000336356 LOC105371045A0A1W2PR82 267 aa16.33■□□□□ 0.2
LRAT-201ENST00000336356 ATP1B4Q9UN42 357 aaPredicted RBP16.3■□□□□ 0.2
LRAT-201ENST00000336356 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
LRAT-201ENST00000336356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
LRAT-201ENST00000336356 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
LRAT-201ENST00000336356 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.2
LRAT-201ENST00000336356 CHMP7Q8WUX9 453 aaPredicted RBP16.27■□□□□ 0.2
LRAT-201ENST00000336356 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
LRAT-201ENST00000336356 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.19
LRAT-201ENST00000336356 NCAPD3P42695 1498 aa16.21■□□□□ 0.18
LRAT-201ENST00000336356 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
LRAT-201ENST00000336356 NEFLP07196 543 aa16.16■□□□□ 0.18
LRAT-201ENST00000336356 MYT1LQ9UL68 1186 aa16.16■□□□□ 0.18
LRAT-201ENST00000336356 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
LRAT-201ENST00000336356 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
LRAT-201ENST00000336356 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
LRAT-201ENST00000336356 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
LRAT-201ENST00000336356 SMARCA4P51532 1647 aa16.08■□□□□ 0.16
LRAT-201ENST00000336356 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
LRAT-201ENST00000336356 CDK11AQ9UQ88 783 aaPredicted RBP16.01■□□□□ 0.15
LRAT-201ENST00000336356 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
LRAT-201ENST00000336356 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
LRAT-201ENST00000336356 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
LRAT-201ENST00000336356 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
LRAT-201ENST00000336356 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
LRAT-201ENST00000336356 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
LRAT-201ENST00000336356 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
LRAT-201ENST00000336356 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
LRAT-201ENST00000336356 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
LRAT-201ENST00000336356 FANCD2Q9BXW9 1451 aa15.88■□□□□ 0.13
LRAT-201ENST00000336356 ZNF316A6NFI3 1004 aaPredicted RBP15.88■□□□□ 0.13
LRAT-201ENST00000336356 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
LRAT-201ENST00000336356 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
LRAT-201ENST00000336356 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
LRAT-201ENST00000336356 ESF1Q9H501 851 aaKnown RBP15.82■□□□□ 0.12
LRAT-201ENST00000336356 SOGA1O94964 1423 aa15.82■□□□□ 0.12
LRAT-201ENST00000336356 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
LRAT-201ENST00000336356 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
LRAT-201ENST00000336356 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.12
LRAT-201ENST00000336356 EEA1Q15075 1411 aa15.74■□□□□ 0.11
LRAT-201ENST00000336356 CARMIL2Q6F5E8 1435 aa15.72■□□□□ 0.11
LRAT-201ENST00000336356 CUX2O14529 1486 aa15.7■□□□□ 0.1
LRAT-201ENST00000336356 UNC13AQ9UPW8 1703 aa15.69■□□□□ 0.1
LRAT-201ENST00000336356 IFT140Q96RY7 1462 aa15.67■□□□□ 0.1
LRAT-201ENST00000336356 WIZO95785 1651 aa15.66■□□□□ 0.1
LRAT-201ENST00000336356 CFTRP13569 1480 aa15.64■□□□□ 0.09
LRAT-201ENST00000336356 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
LRAT-201ENST00000336356 PLEKHD1A6NEE1 506 aa15.6■□□□□ 0.09
LRAT-201ENST00000336356 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
LRAT-201ENST00000336356 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
LRAT-201ENST00000336356 BCANQ96GW7 911 aa15.55■□□□□ 0.08
LRAT-201ENST00000336356 PEG3Q9GZU2 1588 aa15.54■□□□□ 0.08
LRAT-201ENST00000336356 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
LRAT-201ENST00000336356 P3H3Q8IVL6 736 aa15.53■□□□□ 0.08
LRAT-201ENST00000336356 CYB5RLQ6IPT4 315 aa15.51■□□□□ 0.07
LRAT-201ENST00000336356 NESP48681 1621 aa15.5■□□□□ 0.07
LRAT-201ENST00000336356 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
LRAT-201ENST00000336356 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
LRAT-201ENST00000336356 AEBP2Q6ZN18 517 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms