RNA–Protein interactions for RNA: ENST00000425039.3

PMS2P2-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 2, humanhuman

BASIC

Gene PMS2P2, Length 1,128 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P2-201ENST00000425039 NISCHQ9Y2I1 1504 aa42.41■■■■■ 4.38
PMS2P2-201ENST00000425039 ABCC9O60706 1549 aa38.87■■■■□ 3.81
PMS2P2-201ENST00000425039 CCDC180Q9P1Z9 1646 aa38.39■■■■□ 3.74
PMS2P2-201ENST00000425039 DNAJC5BQ9UF47 199 aa36.94■■■■□ 3.5
PMS2P2-201ENST00000425039 RB1CC1Q8TDY2 1594 aa36.79■■■■□ 3.48
PMS2P2-201ENST00000425039 NACADO15069 1562 aa36.38■■■■□ 3.41
PMS2P2-201ENST00000425039 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
PMS2P2-201ENST00000425039 PABPN1Q86U42 306 aaKnown RBP eCLIP36.04■■■■□ 3.36
PMS2P2-201ENST00000425039 DCAF8L2P0C7V8 631 aa35.96■■■■□ 3.35
PMS2P2-201ENST00000425039 BICRAQ9NZM4 1560 aa35.74■■■■□ 3.31
PMS2P2-201ENST00000425039 MYO15BQ96JP2 1530 aa35.68■■■■□ 3.3
PMS2P2-201ENST00000425039 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
PMS2P2-201ENST00000425039 CC2D2AQ9P2K1 1620 aa35.13■■■■□ 3.21
PMS2P2-201ENST00000425039 CECR2Q9BXF3 1484 aa35.08■■■■□ 3.21
PMS2P2-201ENST00000425039 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
PMS2P2-201ENST00000425039 DCAF1Q9Y4B6 1507 aa35.01■■■■□ 3.2
PMS2P2-201ENST00000425039 EIF4G1Q04637 1599 aaKnown RBP34.9■■■■□ 3.18
PMS2P2-201ENST00000425039 SCRIBQ14160 1630 aa34.89■■■■□ 3.18
PMS2P2-201ENST00000425039 DNAJC5Q9H3Z4 198 aa34.36■■■■□ 3.09
PMS2P2-201ENST00000425039 CUX2O14529 1486 aa33.77■■■■□ 3
PMS2P2-201ENST00000425039 ERCC6Q03468 1493 aa33.61■■■□□ 2.97
PMS2P2-201ENST00000425039 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
PMS2P2-201ENST00000425039 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
PMS2P2-201ENST00000425039 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
PMS2P2-201ENST00000425039 SMARCA2P51531 1590 aa33.28■■■□□ 2.92
PMS2P2-201ENST00000425039 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
PMS2P2-201ENST00000425039 NESP48681 1621 aa33.23■■■□□ 2.91
PMS2P2-201ENST00000425039 THOC2Q8NI27 1593 aaKnown RBP33.07■■■□□ 2.88
PMS2P2-201ENST00000425039 BAZ1BQ9UIG0 1483 aaKnown RBP33.03■■■□□ 2.88
PMS2P2-201ENST00000425039 BAZ1AQ9NRL2 1556 aaPredicted RBP32.97■■■□□ 2.87
PMS2P2-201ENST00000425039 LAMC3Q9Y6N6 1575 aa32.95■■■□□ 2.86
PMS2P2-201ENST00000425039 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
PMS2P2-201ENST00000425039 KIF21AQ7Z4S6 1674 aa32.87■■■□□ 2.85
PMS2P2-201ENST00000425039 PDS5BQ9NTI5 1447 aa32.72■■■□□ 2.83
PMS2P2-201ENST00000425039 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
PMS2P2-201ENST00000425039 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
PMS2P2-201ENST00000425039 MRC2Q9UBG0 1479 aa32.49■■■□□ 2.79
PMS2P2-201ENST00000425039 CADPSQ9ULU8 1353 aa32.49■■■□□ 2.79
PMS2P2-201ENST00000425039 WDR62O43379 1518 aa32.46■■■□□ 2.79
PMS2P2-201ENST00000425039 WIZO95785 1651 aa32.28■■■□□ 2.76
PMS2P2-201ENST00000425039 CEP164Q9UPV0 1460 aa32.25■■■□□ 2.75
PMS2P2-201ENST00000425039 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
PMS2P2-201ENST00000425039 OSCARQ8IYS5 282 aa32.07■■■□□ 2.72
PMS2P2-201ENST00000425039 CFTRP13569 1480 aa32.03■■■□□ 2.72
PMS2P2-201ENST00000425039 URB2Q14146 1524 aaKnown RBP31.94■■■□□ 2.7
PMS2P2-201ENST00000425039 TOP2AP11388 1531 aaKnown RBP31.82■■■□□ 2.68
PMS2P2-201ENST00000425039 RIMBP3CA6NJZ7 1639 aa31.81■■■□□ 2.68
PMS2P2-201ENST00000425039 RIMBP3BA6NNM3 1639 aa31.81■■■□□ 2.68
PMS2P2-201ENST00000425039 RIMBP3Q9UFD9 1639 aa31.81■■■□□ 2.68
PMS2P2-201ENST00000425039 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
PMS2P2-201ENST00000425039 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
PMS2P2-201ENST00000425039 ARHGEF11O15085 1522 aa31.62■■■□□ 2.65
PMS2P2-201ENST00000425039 IFT140Q96RY7 1462 aa31.62■■■□□ 2.65
PMS2P2-201ENST00000425039 ZNF608Q9ULD9 1512 aaPredicted RBP31.62■■■□□ 2.65
PMS2P2-201ENST00000425039 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
PMS2P2-201ENST00000425039 EIF4G3O43432 1585 aaKnown RBP31.47■■■□□ 2.63
PMS2P2-201ENST00000425039 CCDC88BA6NC98 1476 aa31.43■■■□□ 2.62
PMS2P2-201ENST00000425039 CHD1O14646 1710 aa31.39■■■□□ 2.62
PMS2P2-201ENST00000425039 ABCC8Q09428 1581 aa31.38■■■□□ 2.61
PMS2P2-201ENST00000425039 CYB5RLQ6IPT4 315 aa31.35■■■□□ 2.61
PMS2P2-201ENST00000425039 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
PMS2P2-201ENST00000425039 TARBP1Q13395 1621 aaKnown RBP31.29■■■□□ 2.6
PMS2P2-201ENST00000425039 ARAP1Q96P48 1450 aa31.26■■■□□ 2.59
PMS2P2-201ENST00000425039 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.59
PMS2P2-201ENST00000425039 TRHP20396 242 aaPredicted RBP31.2■■■□□ 2.59
PMS2P2-201ENST00000425039 FBLN2P98095 1184 aa31.13■■■□□ 2.57
PMS2P2-201ENST00000425039 POLA1P09884 1462 aaPredicted RBP31.13■■■□□ 2.57
PMS2P2-201ENST00000425039 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.55
PMS2P2-201ENST00000425039 CLASP1Q7Z460 1538 aa30.97■■■□□ 2.55
PMS2P2-201ENST00000425039 WDR97A6NE52 1622 aa30.95■■■□□ 2.54
PMS2P2-201ENST00000425039 TDRD9Q8NDG6 1382 aaKnown RBP30.94■■■□□ 2.54
PMS2P2-201ENST00000425039 SOGA1O94964 1423 aa30.94■■■□□ 2.54
PMS2P2-201ENST00000425039 SNAPC4Q5SXM2 1469 aa30.94■■■□□ 2.54
PMS2P2-201ENST00000425039 SYNJ1O43426 1573 aa30.9■■■□□ 2.54
PMS2P2-201ENST00000425039 FGD5Q6ZNL6 1462 aa30.84■■■□□ 2.53
PMS2P2-201ENST00000425039 MAGI1Q96QZ7 1491 aaPredicted RBP30.83■■■□□ 2.53
PMS2P2-201ENST00000425039 CHMP7Q8WUX9 453 aaPredicted RBP30.81■■■□□ 2.52
PMS2P2-201ENST00000425039 GRIN2BQ13224 1484 aa30.76■■■□□ 2.52
PMS2P2-201ENST00000425039 SYNJ2O15056 1496 aa30.74■■■□□ 2.51
PMS2P2-201ENST00000425039 CUX1P39880 1505 aa30.73■■■□□ 2.51
PMS2P2-201ENST00000425039 AEBP2Q6ZN18 517 aaPredicted RBP30.73■■■□□ 2.51
PMS2P2-201ENST00000425039 PBRM1Q86U86 1689 aa30.7■■■□□ 2.5
PMS2P2-201ENST00000425039 GAPVD1Q14C86 1478 aa30.64■■■□□ 2.5
PMS2P2-201ENST00000425039 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.48
PMS2P2-201ENST00000425039 ABCA10Q8WWZ4 1543 aa30.47■■■□□ 2.47
PMS2P2-201ENST00000425039 ERCC6L2Q5T890 1561 aa30.42■■■□□ 2.46
PMS2P2-201ENST00000425039 GRIN2AQ12879 1464 aa30.38■■■□□ 2.45
PMS2P2-201ENST00000425039 CEP170Q5SW79 1584 aa30.34■■■□□ 2.45
PMS2P2-201ENST00000425039 ADAMTS12P58397 1594 aa30.32■■■□□ 2.44
PMS2P2-201ENST00000425039 NUP160Q12769 1436 aa30.29■■■□□ 2.44
PMS2P2-201ENST00000425039 SHROOM2Q13796 1616 aa30.28■■■□□ 2.44
PMS2P2-201ENST00000425039 KIF13AQ9H1H9 1805 aa30.24■■■□□ 2.43
PMS2P2-201ENST00000425039 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.42
PMS2P2-201ENST00000425039 FHAD1B1AJZ9 1412 aa30.16■■■□□ 2.42
PMS2P2-201ENST00000425039 BIVM-ERCC5R4GMW8 1640 aa30.14■■■□□ 2.42
PMS2P2-201ENST00000425039 TOP2BQ02880 1626 aa30.11■■■□□ 2.41
PMS2P2-201ENST00000425039 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
PMS2P2-201ENST00000425039 PRG4Q92954 1404 aaPredicted RBP30.04■■■□□ 2.4
PMS2P2-201ENST00000425039 JPH4Q96JJ6 628 aa29.93■■■□□ 2.38
PMS2P2-201ENST00000425039 ABCC10Q5T3U5 1492 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms