Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC12.7□□□□□ -0.387e-8■■□□□ 13
U2AF2P26368 EWSR1-215ENST00000469669 2630 ntTSL 220.28■□□□□ 0.848e-15■■□□□ 13
U2AF2P26368 XPO1-211ENST00000451765 643 ntTSL 317.23■□□□□ 0.353e-6■■□□□ 13
U2AF2P26368 CDC14B-207ENST00000463547 553 ntTSL 416.02■□□□□ 0.166e-7■■□□□ 13
U2AF2P26368 CDC14B-205ENST00000415608 684 ntTSL 57.65□□□□□ -1.186e-7■■□□□ 13
U2AF2P26368 CDC14B-213ENST00000496750 649 ntTSL 32.11□□□□□ -2.076e-7■■□□□ 13
U2AF2P26368 SEMA4G-206ENST00000518124 596 ntTSL 319.67■□□□□ 0.743e-10■■□□□ 13
U2AF2P26368 SEMA4G-209ENST00000519649 2024 ntTSL 517.95■□□□□ 0.463e-10■■□□□ 13
U2AF2P26368 SEMA4G-210ENST00000519756 728 ntTSL 514.73□□□□□ -0.053e-10■■□□□ 13
U2AF2P26368 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.42■■□□□ 1.187e-8■■□□□ 13
U2AF2P26368 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.68■■□□□ 1.067e-8■■□□□ 13
U2AF2P26368 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.65■□□□□ 0.97e-8■■□□□ 13
U2AF2P26368 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.57■□□□□ 0.087e-8■■□□□ 13
U2AF2P26368 RTN4-211ENST00000438462 656 ntTSL 512.49□□□□□ -0.417e-8■■□□□ 13
U2AF2P26368 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC10.65□□□□□ -0.77e-8■■□□□ 13
U2AF2P26368 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.137e-8■■□□□ 13
U2AF2P26368 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.97□□□□□ -1.137e-8■■□□□ 13
U2AF2P26368 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.51□□□□□ -1.697e-8■■□□□ 13
U2AF2P26368 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.26□□□□□ -1.737e-8■■□□□ 13
U2AF2P26368 ANAPC5-212ENST00000538223 292 ntTSL 53.24□□□□□ -1.892e-11■■□□□ 13
U2AF2P26368 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.873e-7■■□□□ 13
U2AF2P26368 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.653e-7■■□□□ 13
U2AF2P26368 ZNF444-206ENST00000587664 568 ntTSL 324.11■■□□□ 1.453e-7■■□□□ 13
U2AF2P26368 PICALM-220ENST00000532603 566 ntTSL 42.36□□□□□ -2.039e-8■■□□□ 13
U2AF2P26368 PICALM-206ENST00000526907 737 ntTSL 51.91□□□□□ -2.19e-8■■□□□ 13
U2AF2P26368 TRAPPC12-218ENST00000479897 454 ntTSL 314.39□□□□□ -0.112e-7■■□□□ 13
U2AF2P26368 TRAPPC12-207ENST00000433382 578 ntTSL 513.96□□□□□ -0.172e-7■■□□□ 13
U2AF2P26368 TRAPPC12-223ENST00000497597 3401 ntTSL 213□□□□□ -0.332e-7■■□□□ 13
U2AF2P26368 TRAPPC12-204ENST00000415624 815 ntAPPRIS ALT2 TSL 512.49□□□□□ -0.412e-7■■□□□ 13
U2AF2P26368 ESRP2-204ENST00000562724 478 ntTSL 320.65■□□□□ 0.92e-6■■□□□ 13
U2AF2P26368 ESRP2-212ENST00000569964 572 ntTSL 320■□□□□ 0.792e-6■■□□□ 13
U2AF2P26368 ESRP2-207ENST00000564382 592 ntTSL 418.27■□□□□ 0.522e-6■■□□□ 13
U2AF2P26368 ESRP2-206ENST00000563159 716 ntTSL 417.85■□□□□ 0.452e-6■■□□□ 13
U2AF2P26368 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.432e-6■■□□□ 13
U2AF2P26368 ESRP2-205ENST00000562738 590 ntTSL 416.52■□□□□ 0.242e-6■■□□□ 13
U2AF2P26368 ESRP2-203ENST00000562567 1379 ntTSL 416.42■□□□□ 0.222e-6■■□□□ 13
U2AF2P26368 ESRP2-201ENST00000251366 3228 ntTSL 1 (best)15.15■□□□□ 0.022e-6■■□□□ 13
U2AF2P26368 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.162e-6■■□□□ 13
U2AF2P26368 ESRP2-208ENST00000564465 734 ntTSL 312.29□□□□□ -0.442e-6■■□□□ 13
U2AF2P26368 CRIM1-203ENST00000426856 667 ntTSL 316.65■□□□□ 0.261e-6■■□□□ 13
U2AF2P26368 SKIV2L-209ENST00000483553 1307 ntTSL 518.17■□□□□ 0.57e-9■■□□□ 13
U2AF2P26368 SKIV2L-207ENST00000471818 706 ntTSL 518.12■□□□□ 0.497e-9■■□□□ 13
U2AF2P26368 SKIV2L-204ENST00000465703 4507 ntTSL 1 (best)17.37■□□□□ 0.377e-9■■□□□ 13
U2AF2P26368 SKIV2L-213ENST00000491994 866 ntTSL 217.13■□□□□ 0.337e-9■■□□□ 13
U2AF2P26368 SKIV2L-206ENST00000470453 455 ntTSL 316.95■□□□□ 0.37e-9■■□□□ 13
U2AF2P26368 SKIV2L-208ENST00000474839 3378 ntTSL 214.4□□□□□ -0.17e-9■■□□□ 13
U2AF2P26368 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.337e-9■■□□□ 13
U2AF2P26368 CMC2-206ENST00000563779 2087 ntTSL 1 (best)6.92□□□□□ -1.31e-9■■□□□ 13
U2AF2P26368 CMC2-221ENST00000569666 545 ntTSL 24.49□□□□□ -1.691e-9■■□□□ 13
U2AF2P26368 CMC2-217ENST00000566918 605 ntTSL 34.31□□□□□ -1.721e-9■■□□□ 13
U2AF2P26368 CMC2-203ENST00000561614 683 ntTSL 34.28□□□□□ -1.721e-9■■□□□ 13
U2AF2P26368 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.921e-9■■□□□ 13
U2AF2P26368 CMC2-216ENST00000566231 652 ntTSL 32.73□□□□□ -1.971e-9■■□□□ 13
U2AF2P26368 CMC2-215ENST00000566047 660 ntTSL 22.13□□□□□ -2.071e-9■■□□□ 13
U2AF2P26368 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.952e-8■■□□□ 13
U2AF2P26368 FKBP10-206ENST00000489591 2826 ntTSL 219.86■□□□□ 0.772e-8■■□□□ 13
U2AF2P26368 FKBP10-203ENST00000455106 1965 ntTSL 216.87■□□□□ 0.292e-8■■□□□ 13
U2AF2P26368 PPID-201ENST00000307720 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.392e-9■■□□□ 13
U2AF2P26368 CIR1-202ENST00000377973 561 ntTSL 310.26□□□□□ -0.772e-9■■□□□ 13
U2AF2P26368 WWP1-203ENST00000518683 2002 ntTSL 1 (best)6.61□□□□□ -1.355e-7■■□□□ 13
U2AF2P26368 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.051e-6■■□□□ 13
U2AF2P26368 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.441e-6■■□□□ 13
U2AF2P26368 UBE2E3-210ENST00000602762 340 ntTSL 38.71□□□□□ -1.024e-7■■□□□ 13
U2AF2P26368 ORC4-208ENST00000481488 590 ntTSL 31.5□□□□□ -2.176e-10■■□□□ 13
U2AF2P26368 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.072e-7■■□□□ 13
U2AF2P26368 RERE-203ENST00000400907 2973 ntTSL 5 BASIC9.52□□□□□ -0.892e-7■■□□□ 13
U2AF2P26368 TTC38-204ENST00000422713 828 ntTSL 514.61□□□□□ -0.071e-9■■□□□ 12.9
U2AF2P26368 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.06■■□□□ 1.444e-14■■□□□ 12.9
U2AF2P26368 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.59■■□□□ 1.374e-14■■□□□ 12.9
U2AF2P26368 SNAP23-216ENST00000568331 557 ntTSL 423.59■■□□□ 1.374e-14■■□□□ 12.9
U2AF2P26368 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.77■■□□□ 1.244e-14■■□□□ 12.9
U2AF2P26368 SNAP23-213ENST00000566327 568 ntTSL 422.02■■□□□ 1.124e-14■■□□□ 12.9
U2AF2P26368 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.974e-14■■□□□ 12.9
U2AF2P26368 SNAP23-221ENST00000568859 565 ntTSL 417.06■□□□□ 0.324e-14■■□□□ 12.9
U2AF2P26368 SNAP23-217ENST00000568451 573 ntTSL 47.3□□□□□ -1.244e-14■■□□□ 12.9
U2AF2P26368 SNAP23-211ENST00000566035 846 ntTSL 37.18□□□□□ -1.264e-14■■□□□ 12.9
U2AF2P26368 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.18□□□□□ -1.264e-14■■□□□ 12.9
U2AF2P26368 SNAP23-204ENST00000561526 565 ntTSL 47.12□□□□□ -1.274e-14■■□□□ 12.9
U2AF2P26368 SNAP23-209ENST00000563873 368 ntTSL 35.84□□□□□ -1.474e-14■■□□□ 12.9
U2AF2P26368 SNAP23-218ENST00000568514 1018 ntTSL 33.46□□□□□ -1.864e-14■■□□□ 12.9
U2AF2P26368 SNAP23-219ENST00000568745 814 ntTSL 52.47□□□□□ -2.014e-14■■□□□ 12.9
U2AF2P26368 SNAP23-207ENST00000563765 855 ntTSL 31.72□□□□□ -2.134e-14■■□□□ 12.9
U2AF2P26368 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.95□□□□□ -2.264e-14■■□□□ 12.9
U2AF2P26368 YAP1-205ENST00000526594 785 ntTSL 33.63□□□□□ -1.834e-14■■□□□ 12.9
U2AF2P26368 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.62■□□□□ 0.894e-7■■□□□ 12.9
U2AF2P26368 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.82■□□□□ 0.284e-7■■□□□ 12.9
U2AF2P26368 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.244e-7■■□□□ 12.9
U2AF2P26368 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.59■□□□□ 0.893e-7■■□□□ 12.9
U2AF2P26368 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.17■□□□□ 0.823e-7■■□□□ 12.9
U2AF2P26368 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.143e-7■■□□□ 12.9
U2AF2P26368 RPA2-204ENST00000419958 554 ntTSL 36.75□□□□□ -1.333e-7■■□□□ 12.9
U2AF2P26368 PITPNB-204ENST00000436663 590 ntTSL 215.73■□□□□ 0.114e-8■■□□□ 12.9
U2AF2P26368 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.856e-9■■□□□ 12.9
U2AF2P26368 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.696e-9■■□□□ 12.9
U2AF2P26368 CBWD2-202ENST00000358604 1740 ntTSL 1 (best)21.17■□□□□ 0.986e-9■■□□□ 12.9
U2AF2P26368 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.95■□□□□ 0.466e-9■■□□□ 12.9
U2AF2P26368 CBWD2-205ENST00000456188 1436 ntTSL 1 (best)13.76□□□□□ -0.216e-9■■□□□ 12.9
U2AF2P26368 GANAB-207ENST00000526732 824 ntTSL 214.19□□□□□ -0.143e-6■■□□□ 12.9
U2AF2P26368 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.222e-6■■□□□ 12.9
U2AF2P26368 MFF-212ENST00000436791 726 ntTSL 45.29□□□□□ -1.565e-8■■□□□ 12.9
Retrieved 100 of 36,523 protein–RNA pairs in 170.4 ms