RNA–Protein interactions for RNA: ENST00000602762.5

UBE2E3-210, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-210ENST00000602762 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
UBE2E3-210ENST00000602762 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
UBE2E3-210ENST00000602762 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
UBE2E3-210ENST00000602762 ABCC9O60706 1549 aa17.01■□□□□ 0.31
UBE2E3-210ENST00000602762 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
UBE2E3-210ENST00000602762 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
UBE2E3-210ENST00000602762 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
UBE2E3-210ENST00000602762 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
UBE2E3-210ENST00000602762 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
UBE2E3-210ENST00000602762 NACADO15069 1562 aa16.14■□□□□ 0.17
UBE2E3-210ENST00000602762 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
UBE2E3-210ENST00000602762 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
UBE2E3-210ENST00000602762 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
UBE2E3-210ENST00000602762 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
UBE2E3-210ENST00000602762 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
UBE2E3-210ENST00000602762 BICRAQ9NZM4 1560 aa15.71■□□□□ 0.11
UBE2E3-210ENST00000602762 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
UBE2E3-210ENST00000602762 SCRIBQ14160 1630 aa15.58■□□□□ 0.09
UBE2E3-210ENST00000602762 FOXD1Q16676 465 aa15.52■□□□□ 0.08
UBE2E3-210ENST00000602762 SHROOM4Q9ULL8 1493 aa15.51■□□□□ 0.07
UBE2E3-210ENST00000602762 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
UBE2E3-210ENST00000602762 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
UBE2E3-210ENST00000602762 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
UBE2E3-210ENST00000602762 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
UBE2E3-210ENST00000602762 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
UBE2E3-210ENST00000602762 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
UBE2E3-210ENST00000602762 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
UBE2E3-210ENST00000602762 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
UBE2E3-210ENST00000602762 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
UBE2E3-210ENST00000602762 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
UBE2E3-210ENST00000602762 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
UBE2E3-210ENST00000602762 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
UBE2E3-210ENST00000602762 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
UBE2E3-210ENST00000602762 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
UBE2E3-210ENST00000602762 NESP48681 1621 aa14.65□□□□□ -0.06
UBE2E3-210ENST00000602762 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
UBE2E3-210ENST00000602762 WIZO95785 1651 aa14.56□□□□□ -0.08
UBE2E3-210ENST00000602762 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
UBE2E3-210ENST00000602762 CUX2O14529 1486 aa14.55□□□□□ -0.08
UBE2E3-210ENST00000602762 MSH5O43196 834 aa14.52□□□□□ -0.09
UBE2E3-210ENST00000602762 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
UBE2E3-210ENST00000602762 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
UBE2E3-210ENST00000602762 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
UBE2E3-210ENST00000602762 DNAJC5Q9H3Z4 198 aa14.46□□□□□ -0.09
UBE2E3-210ENST00000602762 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
UBE2E3-210ENST00000602762 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
UBE2E3-210ENST00000602762 ADRA2BP18089 450 aa14.41□□□□□ -0.1
UBE2E3-210ENST00000602762 CFTRP13569 1480 aa14.38□□□□□ -0.11
UBE2E3-210ENST00000602762 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
UBE2E3-210ENST00000602762 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
UBE2E3-210ENST00000602762 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.12
UBE2E3-210ENST00000602762 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
UBE2E3-210ENST00000602762 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
UBE2E3-210ENST00000602762 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
UBE2E3-210ENST00000602762 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
UBE2E3-210ENST00000602762 WDR62O43379 1518 aa14.25□□□□□ -0.13
UBE2E3-210ENST00000602762 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
UBE2E3-210ENST00000602762 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
UBE2E3-210ENST00000602762 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
UBE2E3-210ENST00000602762 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
UBE2E3-210ENST00000602762 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
UBE2E3-210ENST00000602762 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
UBE2E3-210ENST00000602762 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
UBE2E3-210ENST00000602762 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
UBE2E3-210ENST00000602762 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
UBE2E3-210ENST00000602762 POLA1P09884 1462 aaPredicted RBP13.94□□□□□ -0.18
UBE2E3-210ENST00000602762 SOGA1O94964 1423 aa13.94□□□□□ -0.18
UBE2E3-210ENST00000602762 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBE2E3-210ENST00000602762 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
UBE2E3-210ENST00000602762 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
UBE2E3-210ENST00000602762 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
UBE2E3-210ENST00000602762 CUX1P39880 1505 aa13.89□□□□□ -0.19
UBE2E3-210ENST00000602762 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
UBE2E3-210ENST00000602762 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
UBE2E3-210ENST00000602762 FBLN2P98095 1184 aa13.86□□□□□ -0.19
UBE2E3-210ENST00000602762 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.19
UBE2E3-210ENST00000602762 CHMP7Q8WUX9 453 aaPredicted RBP13.79□□□□□ -0.2
UBE2E3-210ENST00000602762 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
UBE2E3-210ENST00000602762 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
UBE2E3-210ENST00000602762 SNAPC4Q5SXM2 1469 aa13.75□□□□□ -0.21
UBE2E3-210ENST00000602762 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
UBE2E3-210ENST00000602762 ABCA10Q8WWZ4 1543 aa13.73□□□□□ -0.21
UBE2E3-210ENST00000602762 CYB5RLQ6IPT4 315 aa13.71□□□□□ -0.21
UBE2E3-210ENST00000602762 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
UBE2E3-210ENST00000602762 WDR97A6NE52 1622 aa13.71□□□□□ -0.22
UBE2E3-210ENST00000602762 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
UBE2E3-210ENST00000602762 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
UBE2E3-210ENST00000602762 RIMBP3CA6NJZ7 1639 aa13.66□□□□□ -0.22
UBE2E3-210ENST00000602762 RIMBP3BA6NNM3 1639 aa13.66□□□□□ -0.22
UBE2E3-210ENST00000602762 RIMBP3Q9UFD9 1639 aa13.66□□□□□ -0.22
UBE2E3-210ENST00000602762 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
UBE2E3-210ENST00000602762 TOP2BQ02880 1626 aa13.65□□□□□ -0.22
UBE2E3-210ENST00000602762 CHD1O14646 1710 aa13.64□□□□□ -0.23
UBE2E3-210ENST00000602762 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
UBE2E3-210ENST00000602762 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
UBE2E3-210ENST00000602762 CLASP1Q7Z460 1538 aa13.59□□□□□ -0.23
UBE2E3-210ENST00000602762 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
UBE2E3-210ENST00000602762 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
UBE2E3-210ENST00000602762 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
UBE2E3-210ENST00000602762 PBRM1Q86U86 1689 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms