RNA–Protein interactions for RNA: ENST00000465703.5

SKIV2L-204, Transcript of Ski2 like RNA helicase, humanhuman

TSL 1 (best)

Gene SKIV2L, Length 4,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-204ENST00000465703 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
SKIV2L-204ENST00000465703 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
SKIV2L-204ENST00000465703 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
SKIV2L-204ENST00000465703 PELP1Q8IZL8 1130 aaKnown RBP24.15■■□□□ 1.46
SKIV2L-204ENST00000465703 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.43
SKIV2L-204ENST00000465703 MYT1Q01538 1121 aa23.77■■□□□ 1.4
SKIV2L-204ENST00000465703 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
SKIV2L-204ENST00000465703 PCGF6Q9BYE7 350 aa23.74■■□□□ 1.39
SKIV2L-204ENST00000465703 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
SKIV2L-204ENST00000465703 APLP2Q06481 763 aa23.26■■□□□ 1.31
SKIV2L-204ENST00000465703 HRCP23327 699 aa23.24■■□□□ 1.31
SKIV2L-204ENST00000465703 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
SKIV2L-204ENST00000465703 CCER1Q8TC90 406 aaPredicted RBP23.05■■□□□ 1.28
SKIV2L-204ENST00000465703 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
SKIV2L-204ENST00000465703 TRIM26Q12899 539 aaPredicted RBP22.96■■□□□ 1.27
SKIV2L-204ENST00000465703 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
SKIV2L-204ENST00000465703 ERICH6Q7L0X2 663 aa22.88■■□□□ 1.25
SKIV2L-204ENST00000465703 NEFLP07196 543 aa22.65■■□□□ 1.22
SKIV2L-204ENST00000465703 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
SKIV2L-204ENST00000465703 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
SKIV2L-204ENST00000465703 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
SKIV2L-204ENST00000465703 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
SKIV2L-204ENST00000465703 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
SKIV2L-204ENST00000465703 LOC105371045A0A1W2PR82 267 aa22.25■■□□□ 1.15
SKIV2L-204ENST00000465703 DIEXFQ68CQ4 756 aaKnown RBP22.16■■□□□ 1.14
SKIV2L-204ENST00000465703 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
SKIV2L-204ENST00000465703 GTF3C3Q9Y5Q9 886 aa21.93■■□□□ 1.1
SKIV2L-204ENST00000465703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.89■■□□□ 1.09
SKIV2L-204ENST00000465703 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
SKIV2L-204ENST00000465703 ACIN1Q9UKV3 1341 aaKnown RBP21.85■■□□□ 1.09
SKIV2L-204ENST00000465703 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
SKIV2L-204ENST00000465703 DAXXQ9UER7 740 aaPredicted RBP21.76■■□□□ 1.07
SKIV2L-204ENST00000465703 CLSPNQ9HAW4 1339 aa21.68■■□□□ 1.06
SKIV2L-204ENST00000465703 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
SKIV2L-204ENST00000465703 RTL5Q5HYW3 569 aaPredicted RBP21.67■■□□□ 1.06
SKIV2L-204ENST00000465703 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
SKIV2L-204ENST00000465703 ITGAEP38570 1179 aa21.55■■□□□ 1.04
SKIV2L-204ENST00000465703 CDK11AQ9UQ88 783 aaPredicted RBP21.43■■□□□ 1.02
SKIV2L-204ENST00000465703 ANP32CO43423 234 aa21.34■■□□□ 1.01
SKIV2L-204ENST00000465703 BCANQ96GW7 911 aa21.29■■□□□ 1
SKIV2L-204ENST00000465703 SCAF1Q9H7N4 1312 aaKnown RBP21.27■■□□□ 1
SKIV2L-204ENST00000465703 MYT1LQ9UL68 1186 aa21.27■■□□□ 1
SKIV2L-204ENST00000465703 POLR3GLQ9BT43 218 aa21.26■□□□□ 0.99
SKIV2L-204ENST00000465703 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
SKIV2L-204ENST00000465703 FAM50AQ14320 339 aaKnown RBP21.11■□□□□ 0.97
SKIV2L-204ENST00000465703 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
SKIV2L-204ENST00000465703 ANP32AP39687 249 aaKnown RBP21.05■□□□□ 0.96
SKIV2L-204ENST00000465703 CNGB1Q14028 1251 aaPredicted RBP20.98■□□□□ 0.95
SKIV2L-204ENST00000465703 FKBP8Q14318 412 aa20.97■□□□□ 0.95
SKIV2L-204ENST00000465703 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
SKIV2L-204ENST00000465703 TRIM52Q96A61 297 aa20.93■□□□□ 0.94
SKIV2L-204ENST00000465703 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
SKIV2L-204ENST00000465703 MIER1Q8N108 512 aa20.8■□□□□ 0.92
SKIV2L-204ENST00000465703 MYO15BQ96JP2 1530 aa20.79■□□□□ 0.92
SKIV2L-204ENST00000465703 ANP32EQ9BTT0 268 aa20.75■□□□□ 0.91
SKIV2L-204ENST00000465703 HNRNPUQ00839 825 aaKnown RBP eCLIP20.71■□□□□ 0.91
SKIV2L-204ENST00000465703 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
SKIV2L-204ENST00000465703 DDX10Q13206 875 aaKnown RBP20.68■□□□□ 0.9
SKIV2L-204ENST00000465703 GLIPR1L2Q4G1C9 344 aa20.65■□□□□ 0.9
SKIV2L-204ENST00000465703 ZBTB47Q9UFB7 747 aaPredicted RBP20.64■□□□□ 0.89
SKIV2L-204ENST00000465703 EIF5BO60841 1220 aaKnown RBP20.59■□□□□ 0.89
SKIV2L-204ENST00000465703 ZNF326Q5BKZ1 582 aaKnown RBP20.58■□□□□ 0.88
SKIV2L-204ENST00000465703 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.88
SKIV2L-204ENST00000465703 EEA1Q15075 1411 aa20.56■□□□□ 0.88
SKIV2L-204ENST00000465703 CCDC136Q96JN2 1154 aa20.55■□□□□ 0.88
SKIV2L-204ENST00000465703 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
SKIV2L-204ENST00000465703 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.87
SKIV2L-204ENST00000465703 ABCC9O60706 1549 aa20.47■□□□□ 0.87
SKIV2L-204ENST00000465703 ANP32BQ92688 251 aaKnown RBP20.46■□□□□ 0.87
SKIV2L-204ENST00000465703 FAM9BQ8IZU0 186 aa20.45■□□□□ 0.86
SKIV2L-204ENST00000465703 NBR1Q14596 966 aa20.45■□□□□ 0.86
SKIV2L-204ENST00000465703 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
SKIV2L-204ENST00000465703 CLIP1P30622 1438 aa20.43■□□□□ 0.86
SKIV2L-204ENST00000465703 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
SKIV2L-204ENST00000465703 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.852e-6■■■□□ 17.4
SKIV2L-204ENST00000465703 MRS2Q9HD23 443 aa20.39■□□□□ 0.85
SKIV2L-204ENST00000465703 SUPT16HQ9Y5B9 1047 aaKnown RBP20.38■□□□□ 0.85
SKIV2L-204ENST00000465703 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
SKIV2L-204ENST00000465703 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.36■□□□□ 0.85
SKIV2L-204ENST00000465703 TMC1Q8TDI8 760 aa20.35■□□□□ 0.85
SKIV2L-204ENST00000465703 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
SKIV2L-204ENST00000465703 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
SKIV2L-204ENST00000465703 P3H3Q8IVL6 736 aa20.32■□□□□ 0.84
SKIV2L-204ENST00000465703 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
SKIV2L-204ENST00000465703 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
SKIV2L-204ENST00000465703 NEFMP07197 916 aa20.28■□□□□ 0.84
SKIV2L-204ENST00000465703 EIF4G2P78344 907 aaKnown RBP eCLIP20.28■□□□□ 0.84
SKIV2L-204ENST00000465703 PPM1GO15355 546 aaPredicted RBP20.27■□□□□ 0.84
SKIV2L-204ENST00000465703 PPP4R2Q9NY27 417 aa20.26■□□□□ 0.83
SKIV2L-204ENST00000465703 BCL11AQ9H165 835 aa20.24■□□□□ 0.83
SKIV2L-204ENST00000465703 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
SKIV2L-204ENST00000465703 IRX6P78412 446 aaPredicted RBP20.22■□□□□ 0.83
SKIV2L-204ENST00000465703 TIMELESSQ9UNS1 1208 aa20.19■□□□□ 0.82
SKIV2L-204ENST00000465703 ERICH6BQ5W0A0 696 aa20.15■□□□□ 0.82
SKIV2L-204ENST00000465703 NOP58Q9Y2X3 529 aaKnown RBP20.15■□□□□ 0.82
SKIV2L-204ENST00000465703 CCER2I3L3R5 266 aa20.14■□□□□ 0.82
SKIV2L-204ENST00000465703 BECN1Q14457 450 aa20.14■□□□□ 0.82
SKIV2L-204ENST00000465703 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
SKIV2L-204ENST00000465703 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
SKIV2L-204ENST00000465703 RBM19Q9Y4C8 960 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms