RNA–Protein interactions for RNA: ENST00000564153.5

SNAP23-210, Transcript of synaptosome associated protein 23, humanhuman

TSL 2 BASIC

Gene SNAP23, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-210ENST00000564153 NISCHQ9Y2I1 1504 aa50.81■■■■■ 5.72
SNAP23-210ENST00000564153 CCDC180Q9P1Z9 1646 aa45.51■■■■■ 4.88
SNAP23-210ENST00000564153 ABCC9O60706 1549 aa45.2■■■■■ 4.83
SNAP23-210ENST00000564153 RB1CC1Q8TDY2 1594 aa43.19■■■■■ 4.5
SNAP23-210ENST00000564153 NACADO15069 1562 aa42.93■■■■■ 4.46
SNAP23-210ENST00000564153 DCAF8L2P0C7V8 631 aa42.92■■■■■ 4.46
SNAP23-210ENST00000564153 MYO15BQ96JP2 1530 aa42.37■■■■■ 4.37
SNAP23-210ENST00000564153 ZCCHC6Q5VYS8 1495 aaKnown RBP42.2■■■■■ 4.35
SNAP23-210ENST00000564153 PABPN1Q86U42 306 aaKnown RBP eCLIP42.1■■■■■ 4.33
SNAP23-210ENST00000564153 UNC13AQ9UPW8 1703 aa42.09■■■■■ 4.33
SNAP23-210ENST00000564153 DCAF1Q9Y4B6 1507 aa41.97■■■■■ 4.31
SNAP23-210ENST00000564153 DNAJC5BQ9UF47 199 aa41.87■■■■■ 4.29
SNAP23-210ENST00000564153 BICRAQ9NZM4 1560 aa41.76■■■■■ 4.27
SNAP23-210ENST00000564153 SCRIBQ14160 1630 aa41.55■■■■■ 4.24
SNAP23-210ENST00000564153 SHROOM4Q9ULL8 1493 aa41.36■■■■■ 4.21
SNAP23-210ENST00000564153 EIF4G1Q04637 1599 aaKnown RBP40.81■■■■■ 4.12
SNAP23-210ENST00000564153 CC2D2AQ9P2K1 1620 aa40.81■■■■■ 4.12
SNAP23-210ENST00000564153 CECR2Q9BXF3 1484 aa40.67■■■■■ 4.1
SNAP23-210ENST00000564153 SMARCA4P51532 1647 aa39.6■■■■□ 3.93
SNAP23-210ENST00000564153 NCAPD3P42695 1498 aa39.56■■■■□ 3.92
SNAP23-210ENST00000564153 SMARCA2P51531 1590 aa39.51■■■■□ 3.92
SNAP23-210ENST00000564153 ATAD2BQ9ULI0 1458 aa39.51■■■■□ 3.92
SNAP23-210ENST00000564153 BAZ1AQ9NRL2 1556 aaPredicted RBP39.5■■■■□ 3.91
SNAP23-210ENST00000564153 HMGXB3Q12766 1538 aa39.37■■■■□ 3.89
SNAP23-210ENST00000564153 BAZ1BQ9UIG0 1483 aaKnown RBP39.26■■■■□ 3.88
SNAP23-210ENST00000564153 MROH2BQ7Z745 1585 aa39.14■■■■□ 3.86
SNAP23-210ENST00000564153 PEG3Q9GZU2 1588 aa39.14■■■■□ 3.86
SNAP23-210ENST00000564153 ERCC6Q03468 1493 aa39.11■■■■□ 3.85
SNAP23-210ENST00000564153 NESP48681 1621 aa38.86■■■■□ 3.81
SNAP23-210ENST00000564153 CUX2O14529 1486 aa38.8■■■■□ 3.8
SNAP23-210ENST00000564153 WIZO95785 1651 aa38.72■■■■□ 3.79
SNAP23-210ENST00000564153 LAMC3Q9Y6N6 1575 aa38.7■■■■□ 3.79
SNAP23-210ENST00000564153 PDS5BQ9NTI5 1447 aa38.5■■■■□ 3.75
SNAP23-210ENST00000564153 RSF1Q96T23 1441 aaPredicted RBP38.45■■■■□ 3.75
SNAP23-210ENST00000564153 CADPSQ9ULU8 1353 aa38.42■■■■□ 3.74
SNAP23-210ENST00000564153 THOC2Q8NI27 1593 aaKnown RBP38.41■■■■□ 3.74
SNAP23-210ENST00000564153 KIF21AQ7Z4S6 1674 aa38.41■■■■□ 3.74
SNAP23-210ENST00000564153 TOP2AP11388 1531 aaKnown RBP38.3■■■■□ 3.72
SNAP23-210ENST00000564153 DNAJC5Q9H3Z4 198 aa38.29■■■■□ 3.72
SNAP23-210ENST00000564153 MRC2Q9UBG0 1479 aa38.14■■■■□ 3.7
SNAP23-210ENST00000564153 CEP164Q9UPV0 1460 aa38.09■■■■□ 3.69
SNAP23-210ENST00000564153 FANCD2Q9BXW9 1451 aa38.03■■■■□ 3.68
SNAP23-210ENST00000564153 CFTRP13569 1480 aa38.03■■■■□ 3.68
SNAP23-210ENST00000564153 WDR62O43379 1518 aa37.98■■■■□ 3.67
SNAP23-210ENST00000564153 CCDC88BA6NC98 1476 aa37.8■■■■□ 3.64
SNAP23-210ENST00000564153 PRDM2Q13029 1718 aa37.75■■■■□ 3.63
SNAP23-210ENST00000564153 URB2Q14146 1524 aaKnown RBP37.63■■■■□ 3.61
SNAP23-210ENST00000564153 TOPBP1Q92547 1522 aa37.32■■■■□ 3.57
SNAP23-210ENST00000564153 ABCC8Q09428 1581 aa37.31■■■■□ 3.56
SNAP23-210ENST00000564153 IFT140Q96RY7 1462 aa37.27■■■■□ 3.56
SNAP23-210ENST00000564153 DNMBPQ6XZF7 1577 aa37.25■■■■□ 3.55
SNAP23-210ENST00000564153 SUPT5HO00267 1087 aaKnown RBP37.17■■■■□ 3.54
SNAP23-210ENST00000564153 ZNF608Q9ULD9 1512 aaPredicted RBP37.11■■■■□ 3.53
SNAP23-210ENST00000564153 OSCARQ8IYS5 282 aa37.1■■■■□ 3.53
SNAP23-210ENST00000564153 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
SNAP23-210ENST00000564153 POLA1P09884 1462 aaPredicted RBP36.95■■■■□ 3.51
SNAP23-210ENST00000564153 TRIM41Q8WV44 630 aa36.95■■■■□ 3.51
SNAP23-210ENST00000564153 TARBP1Q13395 1621 aaKnown RBP36.91■■■■□ 3.5
SNAP23-210ENST00000564153 AQRO60306 1485 aaKnown RBP eCLIP36.83■■■■□ 3.49
SNAP23-210ENST00000564153 SOGA1O94964 1423 aa36.82■■■■□ 3.48
SNAP23-210ENST00000564153 FGD5Q6ZNL6 1462 aa36.82■■■■□ 3.48
SNAP23-210ENST00000564153 RAD54L2Q9Y4B4 1467 aa36.81■■■■□ 3.48
SNAP23-210ENST00000564153 CUX1P39880 1505 aa36.78■■■■□ 3.48
SNAP23-210ENST00000564153 TDRD9Q8NDG6 1382 aaKnown RBP36.69■■■■□ 3.46
SNAP23-210ENST00000564153 FBLN2P98095 1184 aa36.68■■■■□ 3.46
SNAP23-210ENST00000564153 CHD1O14646 1710 aa36.66■■■■□ 3.46
SNAP23-210ENST00000564153 WDR97A6NE52 1622 aa36.65■■■■□ 3.46
SNAP23-210ENST00000564153 RIMBP3CA6NJZ7 1639 aa36.56■■■■□ 3.44
SNAP23-210ENST00000564153 RIMBP3BA6NNM3 1639 aa36.56■■■■□ 3.44
SNAP23-210ENST00000564153 RIMBP3Q9UFD9 1639 aa36.56■■■■□ 3.44
SNAP23-210ENST00000564153 SNAPC4Q5SXM2 1469 aa36.54■■■■□ 3.44
SNAP23-210ENST00000564153 GRIN2BQ13224 1484 aa36.49■■■■□ 3.43
SNAP23-210ENST00000564153 ARHGEF11O15085 1522 aa36.49■■■■□ 3.43
SNAP23-210ENST00000564153 MAGI1Q96QZ7 1491 aaPredicted RBP36.45■■■■□ 3.43
SNAP23-210ENST00000564153 CHMP7Q8WUX9 453 aaPredicted RBP36.42■■■■□ 3.42
SNAP23-210ENST00000564153 GAPVD1Q14C86 1478 aa36.39■■■■□ 3.42
SNAP23-210ENST00000564153 PBRM1Q86U86 1689 aa36.38■■■■□ 3.41
SNAP23-210ENST00000564153 WRNQ14191 1432 aaPredicted RBP eCLIP36.37■■■■□ 3.41
SNAP23-210ENST00000564153 ABCA10Q8WWZ4 1543 aa36.37■■■■□ 3.41
SNAP23-210ENST00000564153 SYNJ1O43426 1573 aa36.32■■■■□ 3.4
SNAP23-210ENST00000564153 SYNJ2O15056 1496 aa36.31■■■■□ 3.4
SNAP23-210ENST00000564153 TOP2BQ02880 1626 aa36.31■■■■□ 3.4
SNAP23-210ENST00000564153 BIVM-ERCC5R4GMW8 1640 aa36.3■■■■□ 3.4
SNAP23-210ENST00000564153 ABCA5Q8WWZ7 1642 aa36.29■■■■□ 3.4
SNAP23-210ENST00000564153 CYB5RLQ6IPT4 315 aa36.22■■■■□ 3.39
SNAP23-210ENST00000564153 CLASP1Q7Z460 1538 aa36.18■■■■□ 3.38
SNAP23-210ENST00000564153 ARAP1Q96P48 1450 aa36.12■■■■□ 3.37
SNAP23-210ENST00000564153 ADAMTS12P58397 1594 aa36.04■■■■□ 3.36
SNAP23-210ENST00000564153 GRIN2AQ12879 1464 aa36■■■■□ 3.35
SNAP23-210ENST00000564153 ERICH3Q5RHP9 1530 aa35.95■■■■□ 3.35
SNAP23-210ENST00000564153 FHAD1B1AJZ9 1412 aa35.95■■■■□ 3.35
SNAP23-210ENST00000564153 CEP170Q5SW79 1584 aa35.82■■■■□ 3.32
SNAP23-210ENST00000564153 TRHP20396 242 aaPredicted RBP35.82■■■■□ 3.32
SNAP23-210ENST00000564153 NUP160Q12769 1436 aa35.81■■■■□ 3.32
SNAP23-210ENST00000564153 KIF27Q86VH2 1401 aa35.68■■■■□ 3.3
SNAP23-210ENST00000564153 ERCC6L2Q5T890 1561 aa35.62■■■■□ 3.29
SNAP23-210ENST00000564153 SHROOM2Q13796 1616 aa35.61■■■■□ 3.29
SNAP23-210ENST00000564153 CUL7Q14999 1698 aa35.56■■■■□ 3.28
SNAP23-210ENST00000564153 RUSC2Q8N2Y8 1516 aa35.52■■■■□ 3.28
SNAP23-210ENST00000564153 PRG4Q92954 1404 aaPredicted RBP35.51■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms