RNA–Protein interactions for RNA: ENST00000470453.1

SKIV2L-206, Transcript of Ski2 like RNA helicase, humanhuman

TSL 3

Gene SKIV2L, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-206ENST00000470453 NISCHQ9Y2I1 1504 aa35.24■■■■□ 3.23
SKIV2L-206ENST00000470453 CCDC180Q9P1Z9 1646 aa31.17■■■□□ 2.58
SKIV2L-206ENST00000470453 ABCC9O60706 1549 aa30.35■■■□□ 2.45
SKIV2L-206ENST00000470453 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
SKIV2L-206ENST00000470453 DCAF1Q9Y4B6 1507 aa29.22■■■□□ 2.27
SKIV2L-206ENST00000470453 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
SKIV2L-206ENST00000470453 NACADO15069 1562 aa29.15■■■□□ 2.26
SKIV2L-206ENST00000470453 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
SKIV2L-206ENST00000470453 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
SKIV2L-206ENST00000470453 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
SKIV2L-206ENST00000470453 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
SKIV2L-206ENST00000470453 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.122e-6■■■□□ 17.4
SKIV2L-206ENST00000470453 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
SKIV2L-206ENST00000470453 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
SKIV2L-206ENST00000470453 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
SKIV2L-206ENST00000470453 EIF4G1Q04637 1599 aaKnown RBP27.47■■□□□ 1.99
SKIV2L-206ENST00000470453 CC2D2AQ9P2K1 1620 aa27.43■■□□□ 1.98
SKIV2L-206ENST00000470453 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
SKIV2L-206ENST00000470453 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
SKIV2L-206ENST00000470453 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
SKIV2L-206ENST00000470453 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
SKIV2L-206ENST00000470453 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
SKIV2L-206ENST00000470453 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
SKIV2L-206ENST00000470453 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
SKIV2L-206ENST00000470453 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
SKIV2L-206ENST00000470453 WIZO95785 1651 aa26.9■■□□□ 1.9
SKIV2L-206ENST00000470453 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
SKIV2L-206ENST00000470453 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
SKIV2L-206ENST00000470453 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
SKIV2L-206ENST00000470453 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
SKIV2L-206ENST00000470453 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
SKIV2L-206ENST00000470453 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
SKIV2L-206ENST00000470453 NESP48681 1621 aa26.22■■□□□ 1.79
SKIV2L-206ENST00000470453 ERCC6Q03468 1493 aa26.13■■□□□ 1.77
SKIV2L-206ENST00000470453 LAMC3Q9Y6N6 1575 aa26.11■■□□□ 1.77
SKIV2L-206ENST00000470453 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
SKIV2L-206ENST00000470453 CFTRP13569 1480 aa26.07■■□□□ 1.76
SKIV2L-206ENST00000470453 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
SKIV2L-206ENST00000470453 CUX2O14529 1486 aa25.91■■□□□ 1.74
SKIV2L-206ENST00000470453 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
SKIV2L-206ENST00000470453 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
SKIV2L-206ENST00000470453 THOC2Q8NI27 1593 aaKnown RBP25.87■■□□□ 1.73
SKIV2L-206ENST00000470453 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
SKIV2L-206ENST00000470453 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
SKIV2L-206ENST00000470453 MRC2Q9UBG0 1479 aa25.65■■□□□ 1.7
SKIV2L-206ENST00000470453 WDR62O43379 1518 aa25.58■■□□□ 1.68
SKIV2L-206ENST00000470453 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
SKIV2L-206ENST00000470453 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
SKIV2L-206ENST00000470453 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
SKIV2L-206ENST00000470453 CUX1P39880 1505 aa25.47■■□□□ 1.67
SKIV2L-206ENST00000470453 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
SKIV2L-206ENST00000470453 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
SKIV2L-206ENST00000470453 BIVM-ERCC5R4GMW8 1640 aa25.41■■□□□ 1.66
SKIV2L-206ENST00000470453 SYNJ1O43426 1573 aa25.4■■□□□ 1.66
SKIV2L-206ENST00000470453 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
SKIV2L-206ENST00000470453 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
SKIV2L-206ENST00000470453 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
SKIV2L-206ENST00000470453 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
SKIV2L-206ENST00000470453 IFT140Q96RY7 1462 aa25.17■■□□□ 1.62
SKIV2L-206ENST00000470453 TARBP1Q13395 1621 aaKnown RBP25.16■■□□□ 1.62
SKIV2L-206ENST00000470453 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
SKIV2L-206ENST00000470453 SOGA1O94964 1423 aa25.14■■□□□ 1.62
SKIV2L-206ENST00000470453 TRIM41Q8WV44 630 aa25.14■■□□□ 1.62
SKIV2L-206ENST00000470453 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.61
SKIV2L-206ENST00000470453 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
SKIV2L-206ENST00000470453 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
SKIV2L-206ENST00000470453 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
SKIV2L-206ENST00000470453 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
SKIV2L-206ENST00000470453 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
SKIV2L-206ENST00000470453 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
SKIV2L-206ENST00000470453 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.58
SKIV2L-206ENST00000470453 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
SKIV2L-206ENST00000470453 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.57
SKIV2L-206ENST00000470453 PBRM1Q86U86 1689 aa24.86■■□□□ 1.57
SKIV2L-206ENST00000470453 GRIN2BQ13224 1484 aa24.82■■□□□ 1.56
SKIV2L-206ENST00000470453 ERICH3Q5RHP9 1530 aa24.8■■□□□ 1.56
SKIV2L-206ENST00000470453 RUSC2Q8N2Y8 1516 aa24.8■■□□□ 1.56
SKIV2L-206ENST00000470453 EEA1Q15075 1411 aa24.77■■□□□ 1.56
SKIV2L-206ENST00000470453 OSCARQ8IYS5 282 aa24.74■■□□□ 1.55
SKIV2L-206ENST00000470453 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
SKIV2L-206ENST00000470453 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
SKIV2L-206ENST00000470453 IGF1RP08069 1367 aa24.7■■□□□ 1.55
SKIV2L-206ENST00000470453 CHD1O14646 1710 aa24.7■■□□□ 1.54
SKIV2L-206ENST00000470453 ADAMTS12P58397 1594 aa24.7■■□□□ 1.54
SKIV2L-206ENST00000470453 CUL7Q14999 1698 aa24.69■■□□□ 1.54
SKIV2L-206ENST00000470453 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
SKIV2L-206ENST00000470453 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
SKIV2L-206ENST00000470453 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
SKIV2L-206ENST00000470453 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
SKIV2L-206ENST00000470453 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
SKIV2L-206ENST00000470453 FBLN2P98095 1184 aa24.56■■□□□ 1.52
SKIV2L-206ENST00000470453 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
SKIV2L-206ENST00000470453 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
SKIV2L-206ENST00000470453 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
SKIV2L-206ENST00000470453 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
SKIV2L-206ENST00000470453 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
SKIV2L-206ENST00000470453 KIF21BO75037 1637 aa24.5■■□□□ 1.51
SKIV2L-206ENST00000470453 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
SKIV2L-206ENST00000470453 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
SKIV2L-206ENST00000470453 ARHGEF11O15085 1522 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms