RNA–Protein interactions for RNA: ENST00000566035.5

SNAP23-211, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-211ENST00000566035 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
SNAP23-211ENST00000566035 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
SNAP23-211ENST00000566035 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
SNAP23-211ENST00000566035 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
SNAP23-211ENST00000566035 DNAJC5Q9H3Z4 198 aa18.14■□□□□ 0.49
SNAP23-211ENST00000566035 ABCC9O60706 1549 aa18.06■□□□□ 0.48
SNAP23-211ENST00000566035 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
SNAP23-211ENST00000566035 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
SNAP23-211ENST00000566035 FOXD1Q16676 465 aa17.16■□□□□ 0.34
SNAP23-211ENST00000566035 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
SNAP23-211ENST00000566035 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
SNAP23-211ENST00000566035 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
SNAP23-211ENST00000566035 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
SNAP23-211ENST00000566035 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
SNAP23-211ENST00000566035 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
SNAP23-211ENST00000566035 CUX2O14529 1486 aa16.28■□□□□ 0.2
SNAP23-211ENST00000566035 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
SNAP23-211ENST00000566035 MSH5O43196 834 aa16.06■□□□□ 0.16
SNAP23-211ENST00000566035 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
SNAP23-211ENST00000566035 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
SNAP23-211ENST00000566035 NACADO15069 1562 aa15.9■□□□□ 0.14
SNAP23-211ENST00000566035 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
SNAP23-211ENST00000566035 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
SNAP23-211ENST00000566035 PPP6R1Q9UPN7 881 aa15.8■□□□□ 0.12
SNAP23-211ENST00000566035 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
SNAP23-211ENST00000566035 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
SNAP23-211ENST00000566035 ADRA2BP18089 450 aa15.69■□□□□ 0.1
SNAP23-211ENST00000566035 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
SNAP23-211ENST00000566035 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
SNAP23-211ENST00000566035 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
SNAP23-211ENST00000566035 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
SNAP23-211ENST00000566035 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
SNAP23-211ENST00000566035 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
SNAP23-211ENST00000566035 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
SNAP23-211ENST00000566035 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
SNAP23-211ENST00000566035 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
SNAP23-211ENST00000566035 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
SNAP23-211ENST00000566035 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
SNAP23-211ENST00000566035 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
SNAP23-211ENST00000566035 LMTK3Q96Q04 1460 aa15□□□□□ -0.01
SNAP23-211ENST00000566035 NESP48681 1621 aa14.99□□□□□ -0.01
SNAP23-211ENST00000566035 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
SNAP23-211ENST00000566035 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
SNAP23-211ENST00000566035 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
SNAP23-211ENST00000566035 SOCS7O14512 581 aa14.95□□□□□ -0.02
SNAP23-211ENST00000566035 FBXO41Q8TF61 875 aa14.8□□□□□ -0.04
SNAP23-211ENST00000566035 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
SNAP23-211ENST00000566035 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
SNAP23-211ENST00000566035 ILDR2Q71H61 639 aa14.69□□□□□ -0.06
SNAP23-211ENST00000566035 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
SNAP23-211ENST00000566035 ERCC6L2Q5T890 1561 aa14.68□□□□□ -0.06
SNAP23-211ENST00000566035 PDS5BQ9NTI5 1447 aa14.65□□□□□ -0.06
SNAP23-211ENST00000566035 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
SNAP23-211ENST00000566035 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
SNAP23-211ENST00000566035 WDR62O43379 1518 aa14.61□□□□□ -0.07
SNAP23-211ENST00000566035 KDM4FA0A1W2PPD8 638 aa14.58□□□□□ -0.08
SNAP23-211ENST00000566035 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
SNAP23-211ENST00000566035 DISP3Q9P2K9 1392 aa14.55□□□□□ -0.08
SNAP23-211ENST00000566035 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
SNAP23-211ENST00000566035 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
SNAP23-211ENST00000566035 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
SNAP23-211ENST00000566035 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
SNAP23-211ENST00000566035 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
SNAP23-211ENST00000566035 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
SNAP23-211ENST00000566035 SYNJ2O15056 1496 aa14.28□□□□□ -0.12
SNAP23-211ENST00000566035 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
SNAP23-211ENST00000566035 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
SNAP23-211ENST00000566035 SPATA31D1Q6ZQQ2 1576 aa14.21□□□□□ -0.14
SNAP23-211ENST00000566035 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
SNAP23-211ENST00000566035 CHD1O14646 1710 aa14.15□□□□□ -0.14
SNAP23-211ENST00000566035 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
SNAP23-211ENST00000566035 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
SNAP23-211ENST00000566035 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
SNAP23-211ENST00000566035 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
SNAP23-211ENST00000566035 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
SNAP23-211ENST00000566035 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
SNAP23-211ENST00000566035 FBLN2P98095 1184 aa14.07□□□□□ -0.16
SNAP23-211ENST00000566035 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
SNAP23-211ENST00000566035 KDM6BO15054 1643 aa14.04□□□□□ -0.16
SNAP23-211ENST00000566035 KIF13AQ9H1H9 1805 aa14.04□□□□□ -0.16
SNAP23-211ENST00000566035 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
SNAP23-211ENST00000566035 GAPVD1Q14C86 1478 aa13.99□□□□□ -0.17
SNAP23-211ENST00000566035 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
SNAP23-211ENST00000566035 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.17
SNAP23-211ENST00000566035 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
SNAP23-211ENST00000566035 FAM69CQ0P6D2 419 aa13.85□□□□□ -0.19
SNAP23-211ENST00000566035 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
SNAP23-211ENST00000566035 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
SNAP23-211ENST00000566035 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
SNAP23-211ENST00000566035 PEG3Q9GZU2 1588 aa13.82□□□□□ -0.2
SNAP23-211ENST00000566035 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNAP23-211ENST00000566035 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.21
SNAP23-211ENST00000566035 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
SNAP23-211ENST00000566035 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
SNAP23-211ENST00000566035 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
SNAP23-211ENST00000566035 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
SNAP23-211ENST00000566035 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
SNAP23-211ENST00000566035 CHMP7Q8WUX9 453 aaPredicted RBP13.67□□□□□ -0.22
SNAP23-211ENST00000566035 CFTRP13569 1480 aa13.65□□□□□ -0.22
SNAP23-211ENST00000566035 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms