RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 NISCHQ9Y2I1 1504 aa38.41■■■■□ 3.74
CRIM1-203ENST00000426856 ABCC9O60706 1549 aa34.59■■■■□ 3.13
CRIM1-203ENST00000426856 CCDC180Q9P1Z9 1646 aa34.51■■■■□ 3.11
CRIM1-203ENST00000426856 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
CRIM1-203ENST00000426856 NACADO15069 1562 aa32.62■■■□□ 2.81
CRIM1-203ENST00000426856 DNAJC5BQ9UF47 199 aa32.52■■■□□ 2.8
CRIM1-203ENST00000426856 DCAF8L2P0C7V8 631 aa32.39■■■□□ 2.78
CRIM1-203ENST00000426856 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
CRIM1-203ENST00000426856 PABPN1Q86U42 306 aaKnown RBP eCLIP32.17■■■□□ 2.74
CRIM1-203ENST00000426856 MYO15BQ96JP2 1530 aa32.13■■■□□ 2.73
CRIM1-203ENST00000426856 BICRAQ9NZM4 1560 aa31.96■■■□□ 2.71
CRIM1-203ENST00000426856 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
CRIM1-203ENST00000426856 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.67
CRIM1-203ENST00000426856 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
CRIM1-203ENST00000426856 SHROOM4Q9ULL8 1493 aa31.45■■■□□ 2.62
CRIM1-203ENST00000426856 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
CRIM1-203ENST00000426856 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
CRIM1-203ENST00000426856 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
CRIM1-203ENST00000426856 NCAPD3P42695 1498 aa30.11■■■□□ 2.41
CRIM1-203ENST00000426856 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
CRIM1-203ENST00000426856 SMARCA4P51532 1647 aa30■■■□□ 2.39
CRIM1-203ENST00000426856 SMARCA2P51531 1590 aa29.92■■■□□ 2.38
CRIM1-203ENST00000426856 HMGXB3Q12766 1538 aa29.9■■■□□ 2.38
CRIM1-203ENST00000426856 DNAJC5Q9H3Z4 198 aa29.86■■■□□ 2.37
CRIM1-203ENST00000426856 ERCC6Q03468 1493 aa29.83■■■□□ 2.37
CRIM1-203ENST00000426856 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
CRIM1-203ENST00000426856 CUX2O14529 1486 aa29.8■■■□□ 2.36
CRIM1-203ENST00000426856 BAZ1BQ9UIG0 1483 aaKnown RBP29.73■■■□□ 2.35
CRIM1-203ENST00000426856 NESP48681 1621 aa29.71■■■□□ 2.35
CRIM1-203ENST00000426856 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.35
CRIM1-203ENST00000426856 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
CRIM1-203ENST00000426856 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.31
CRIM1-203ENST00000426856 THOC2Q8NI27 1593 aaKnown RBP29.43■■■□□ 2.3
CRIM1-203ENST00000426856 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
CRIM1-203ENST00000426856 WIZO95785 1651 aa29.27■■■□□ 2.28
CRIM1-203ENST00000426856 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
CRIM1-203ENST00000426856 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
CRIM1-203ENST00000426856 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
CRIM1-203ENST00000426856 WDR62O43379 1518 aa28.99■■■□□ 2.23
CRIM1-203ENST00000426856 RSF1Q96T23 1441 aaPredicted RBP28.96■■■□□ 2.23
CRIM1-203ENST00000426856 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
CRIM1-203ENST00000426856 FANCD2Q9BXW9 1451 aa28.88■■■□□ 2.21
CRIM1-203ENST00000426856 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
CRIM1-203ENST00000426856 CFTRP13569 1480 aa28.85■■■□□ 2.21
CRIM1-203ENST00000426856 URB2Q14146 1524 aaKnown RBP28.67■■■□□ 2.18
CRIM1-203ENST00000426856 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
CRIM1-203ENST00000426856 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
CRIM1-203ENST00000426856 TRIM41Q8WV44 630 aa28.53■■■□□ 2.16
CRIM1-203ENST00000426856 OSCARQ8IYS5 282 aa28.39■■■□□ 2.14
CRIM1-203ENST00000426856 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
CRIM1-203ENST00000426856 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
CRIM1-203ENST00000426856 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
CRIM1-203ENST00000426856 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
CRIM1-203ENST00000426856 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
CRIM1-203ENST00000426856 EIF4G3O43432 1585 aaKnown RBP28.18■■■□□ 2.1
CRIM1-203ENST00000426856 RIMBP3CA6NJZ7 1639 aa28.11■■■□□ 2.09
CRIM1-203ENST00000426856 RIMBP3BA6NNM3 1639 aa28.11■■■□□ 2.09
CRIM1-203ENST00000426856 RIMBP3Q9UFD9 1639 aa28.11■■■□□ 2.09
CRIM1-203ENST00000426856 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
CRIM1-203ENST00000426856 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.085e-7■■■■□ 25.2
CRIM1-203ENST00000426856 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
CRIM1-203ENST00000426856 ARHGEF11O15085 1522 aa28.01■■■□□ 2.07
CRIM1-203ENST00000426856 CHD1O14646 1710 aa27.98■■■□□ 2.07
CRIM1-203ENST00000426856 RAD54L2Q9Y4B4 1467 aa27.95■■■□□ 2.06
CRIM1-203ENST00000426856 SOGA1O94964 1423 aa27.88■■■□□ 2.05
CRIM1-203ENST00000426856 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
CRIM1-203ENST00000426856 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
CRIM1-203ENST00000426856 CUX1P39880 1505 aa27.83■■■□□ 2.05
CRIM1-203ENST00000426856 FBLN2P98095 1184 aa27.83■■■□□ 2.05
CRIM1-203ENST00000426856 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.04
CRIM1-203ENST00000426856 CYB5RLQ6IPT4 315 aa27.76■■■□□ 2.03
CRIM1-203ENST00000426856 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
CRIM1-203ENST00000426856 ARAP1Q96P48 1450 aa27.74■■■□□ 2.03
CRIM1-203ENST00000426856 MAGI1Q96QZ7 1491 aaPredicted RBP27.66■■■□□ 2.02
CRIM1-203ENST00000426856 GRIN2BQ13224 1484 aa27.65■■■□□ 2.02
CRIM1-203ENST00000426856 CLASP1Q7Z460 1538 aa27.65■■■□□ 2.02
CRIM1-203ENST00000426856 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
CRIM1-203ENST00000426856 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
CRIM1-203ENST00000426856 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
CRIM1-203ENST00000426856 PBRM1Q86U86 1689 aa27.58■■■□□ 2.01
CRIM1-203ENST00000426856 SYNJ2O15056 1496 aa27.57■■■□□ 2
CRIM1-203ENST00000426856 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
CRIM1-203ENST00000426856 ABCA10Q8WWZ4 1543 aa27.52■■■□□ 2
CRIM1-203ENST00000426856 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
CRIM1-203ENST00000426856 TRHP20396 242 aaPredicted RBP27.46■■□□□ 1.99
CRIM1-203ENST00000426856 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
CRIM1-203ENST00000426856 BIVM-ERCC5R4GMW8 1640 aa27.36■■□□□ 1.97
CRIM1-203ENST00000426856 TOP2BQ02880 1626 aa27.35■■□□□ 1.97
CRIM1-203ENST00000426856 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
CRIM1-203ENST00000426856 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
CRIM1-203ENST00000426856 CEP170Q5SW79 1584 aa27.25■■□□□ 1.95
CRIM1-203ENST00000426856 ERCC6L2Q5T890 1561 aa27.25■■□□□ 1.95
CRIM1-203ENST00000426856 NUP160Q12769 1436 aa27.23■■□□□ 1.95
CRIM1-203ENST00000426856 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
CRIM1-203ENST00000426856 ERICH3Q5RHP9 1530 aa27.16■■□□□ 1.94
CRIM1-203ENST00000426856 SHROOM2Q13796 1616 aa27.13■■□□□ 1.93
CRIM1-203ENST00000426856 PRG4Q92954 1404 aaPredicted RBP26.96■■□□□ 1.91
CRIM1-203ENST00000426856 RUSC2Q8N2Y8 1516 aa26.94■■□□□ 1.9
CRIM1-203ENST00000426856 JPH4Q96JJ6 628 aa26.9■■□□□ 1.9
CRIM1-203ENST00000426856 KIF13AQ9H1H9 1805 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms