RNA–Protein interactions for RNA: ENST00000422713.1

TTC38-204, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 5

Gene TTC38, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-204ENST00000422713 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
TTC38-204ENST00000422713 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
TTC38-204ENST00000422713 ABCC9O60706 1549 aa28.89■■■□□ 2.22
TTC38-204ENST00000422713 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
TTC38-204ENST00000422713 NACADO15069 1562 aa27.52■■■□□ 2
TTC38-204ENST00000422713 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
TTC38-204ENST00000422713 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
TTC38-204ENST00000422713 ZCCHC6Q5VYS8 1495 aaKnown RBP27.17■■□□□ 1.94
TTC38-204ENST00000422713 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
TTC38-204ENST00000422713 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
TTC38-204ENST00000422713 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
TTC38-204ENST00000422713 BICRAQ9NZM4 1560 aa26.82■■□□□ 1.88
TTC38-204ENST00000422713 DNAJC5BQ9UF47 199 aa26.71■■□□□ 1.87
TTC38-204ENST00000422713 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
TTC38-204ENST00000422713 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
TTC38-204ENST00000422713 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
TTC38-204ENST00000422713 CC2D2AQ9P2K1 1620 aa26.12■■□□□ 1.77
TTC38-204ENST00000422713 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
TTC38-204ENST00000422713 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
TTC38-204ENST00000422713 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
TTC38-204ENST00000422713 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
TTC38-204ENST00000422713 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
TTC38-204ENST00000422713 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
TTC38-204ENST00000422713 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
TTC38-204ENST00000422713 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
TTC38-204ENST00000422713 MROH2BQ7Z745 1585 aa25.16■■□□□ 1.62
TTC38-204ENST00000422713 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
TTC38-204ENST00000422713 ERCC6Q03468 1493 aa24.95■■□□□ 1.58
TTC38-204ENST00000422713 NESP48681 1621 aa24.9■■□□□ 1.58
TTC38-204ENST00000422713 WIZO95785 1651 aa24.88■■□□□ 1.57
TTC38-204ENST00000422713 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
TTC38-204ENST00000422713 CUX2O14529 1486 aa24.78■■□□□ 1.56
TTC38-204ENST00000422713 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
TTC38-204ENST00000422713 THOC2Q8NI27 1593 aaKnown RBP24.64■■□□□ 1.54
TTC38-204ENST00000422713 KIF21AQ7Z4S6 1674 aa24.63■■□□□ 1.53
TTC38-204ENST00000422713 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
TTC38-204ENST00000422713 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
TTC38-204ENST00000422713 CADPSQ9ULU8 1353 aa24.59■■□□□ 1.53
TTC38-204ENST00000422713 MRC2Q9UBG0 1479 aa24.41■■□□□ 1.5
TTC38-204ENST00000422713 CFTRP13569 1480 aa24.4■■□□□ 1.5
TTC38-204ENST00000422713 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
TTC38-204ENST00000422713 WDR62O43379 1518 aa24.36■■□□□ 1.49
TTC38-204ENST00000422713 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
TTC38-204ENST00000422713 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
TTC38-204ENST00000422713 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
TTC38-204ENST00000422713 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
TTC38-204ENST00000422713 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
TTC38-204ENST00000422713 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
TTC38-204ENST00000422713 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
TTC38-204ENST00000422713 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
TTC38-204ENST00000422713 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
TTC38-204ENST00000422713 SUPT5HO00267 1087 aaKnown RBP23.81■■□□□ 1.4
TTC38-204ENST00000422713 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
TTC38-204ENST00000422713 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
TTC38-204ENST00000422713 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
TTC38-204ENST00000422713 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
TTC38-204ENST00000422713 CUX1P39880 1505 aa23.64■■□□□ 1.38
TTC38-204ENST00000422713 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
TTC38-204ENST00000422713 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
TTC38-204ENST00000422713 OSCARQ8IYS5 282 aa23.59■■□□□ 1.37
TTC38-204ENST00000422713 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.363e-8■■■■■ 43.8
TTC38-204ENST00000422713 SOGA1O94964 1423 aa23.55■■□□□ 1.36
TTC38-204ENST00000422713 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
TTC38-204ENST00000422713 CHD1O14646 1710 aa23.49■■□□□ 1.35
TTC38-204ENST00000422713 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
TTC38-204ENST00000422713 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
TTC38-204ENST00000422713 SNAPC4Q5SXM2 1469 aa23.42■■□□□ 1.34
TTC38-204ENST00000422713 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
TTC38-204ENST00000422713 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
TTC38-204ENST00000422713 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
TTC38-204ENST00000422713 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
TTC38-204ENST00000422713 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
TTC38-204ENST00000422713 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
TTC38-204ENST00000422713 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
TTC38-204ENST00000422713 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
TTC38-204ENST00000422713 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
TTC38-204ENST00000422713 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
TTC38-204ENST00000422713 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
TTC38-204ENST00000422713 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
TTC38-204ENST00000422713 FBLN2P98095 1184 aa23.34■■□□□ 1.33
TTC38-204ENST00000422713 ARHGEF11O15085 1522 aa23.33■■□□□ 1.33
TTC38-204ENST00000422713 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
TTC38-204ENST00000422713 SYNJ2O15056 1496 aa23.26■■□□□ 1.31
TTC38-204ENST00000422713 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
TTC38-204ENST00000422713 CHMP7Q8WUX9 453 aaPredicted RBP23.2■■□□□ 1.3
TTC38-204ENST00000422713 ADAMTS12P58397 1594 aa23.16■■□□□ 1.3
TTC38-204ENST00000422713 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
TTC38-204ENST00000422713 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
TTC38-204ENST00000422713 ERICH3Q5RHP9 1530 aa23.07■■□□□ 1.28
TTC38-204ENST00000422713 CYB5RLQ6IPT4 315 aa23.04■■□□□ 1.28
TTC38-204ENST00000422713 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
TTC38-204ENST00000422713 CEP170Q5SW79 1584 aa23■■□□□ 1.27
TTC38-204ENST00000422713 NUP160Q12769 1436 aa22.98■■□□□ 1.27
TTC38-204ENST00000422713 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
TTC38-204ENST00000422713 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
TTC38-204ENST00000422713 ERCC6L2Q5T890 1561 aa22.86■■□□□ 1.25
TTC38-204ENST00000422713 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.25
TTC38-204ENST00000422713 CUL7Q14999 1698 aa22.83■■□□□ 1.24
TTC38-204ENST00000422713 IGF1RP08069 1367 aa22.76■■□□□ 1.23
TTC38-204ENST00000422713 TRHP20396 242 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms