RNA–Protein interactions for RNA: ENST00000563779.5

CMC2-206, Transcript of C-X9-C motif containing 2, humanhuman

TSL 1 (best)

Gene CMC2, Length 2,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-206ENST00000563779 AEBP2Q6ZN18 517 aaPredicted RBP19.91■□□□□ 0.78
CMC2-206ENST00000563779 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
CMC2-206ENST00000563779 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
CMC2-206ENST00000563779 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
CMC2-206ENST00000563779 FOXD1Q16676 465 aa15.82■□□□□ 0.12
CMC2-206ENST00000563779 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
CMC2-206ENST00000563779 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
CMC2-206ENST00000563779 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
CMC2-206ENST00000563779 KCNA4P22459 653 aa14.96□□□□□ -0.02
CMC2-206ENST00000563779 MSH5O43196 834 aa14.9□□□□□ -0.02
CMC2-206ENST00000563779 ADRA2BP18089 450 aa14.89□□□□□ -0.03
CMC2-206ENST00000563779 PIAS4Q8N2W9 510 aaPredicted RBP14.89□□□□□ -0.03
CMC2-206ENST00000563779 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
CMC2-206ENST00000563779 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
CMC2-206ENST00000563779 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
CMC2-206ENST00000563779 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
CMC2-206ENST00000563779 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
CMC2-206ENST00000563779 POTEDQ86YR6 584 aa13.95□□□□□ -0.18
CMC2-206ENST00000563779 ZBTB22O15209 634 aa13.9□□□□□ -0.18
CMC2-206ENST00000563779 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
CMC2-206ENST00000563779 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
CMC2-206ENST00000563779 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
CMC2-206ENST00000563779 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
CMC2-206ENST00000563779 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
CMC2-206ENST00000563779 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.27
CMC2-206ENST00000563779 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
CMC2-206ENST00000563779 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
CMC2-206ENST00000563779 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
CMC2-206ENST00000563779 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
CMC2-206ENST00000563779 FKBP8Q14318 412 aa13.19□□□□□ -0.3
CMC2-206ENST00000563779 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
CMC2-206ENST00000563779 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
CMC2-206ENST00000563779 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
CMC2-206ENST00000563779 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
CMC2-206ENST00000563779 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
CMC2-206ENST00000563779 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
CMC2-206ENST00000563779 BCANQ96GW7 911 aa12.84□□□□□ -0.35
CMC2-206ENST00000563779 TPRNQ4KMQ1 711 aa12.79□□□□□ -0.36
CMC2-206ENST00000563779 TIMELESSQ9UNS1 1208 aa12.74□□□□□ -0.37
CMC2-206ENST00000563779 DAXXQ9UER7 740 aaPredicted RBP12.71□□□□□ -0.37
CMC2-206ENST00000563779 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
CMC2-206ENST00000563779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.393e-7■□□□□ 9.5
CMC2-206ENST00000563779 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.39
CMC2-206ENST00000563779 C1QBPQ07021 282 aaKnown RBP12.55□□□□□ -0.4
CMC2-206ENST00000563779 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
CMC2-206ENST00000563779 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
CMC2-206ENST00000563779 KDM2AQ9Y2K7 1162 aa12.52□□□□□ -0.4
CMC2-206ENST00000563779 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
CMC2-206ENST00000563779 FBLN2P98095 1184 aa12.49□□□□□ -0.41
CMC2-206ENST00000563779 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
CMC2-206ENST00000563779 ARXQ96QS3 562 aa12.39□□□□□ -0.43
CMC2-206ENST00000563779 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
CMC2-206ENST00000563779 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
CMC2-206ENST00000563779 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
CMC2-206ENST00000563779 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
CMC2-206ENST00000563779 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
CMC2-206ENST00000563779 APLP2Q06481 763 aa12.25□□□□□ -0.45
CMC2-206ENST00000563779 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.23□□□□□ -0.45
CMC2-206ENST00000563779 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
CMC2-206ENST00000563779 PKD2Q13563 968 aa12.21□□□□□ -0.45
CMC2-206ENST00000563779 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
CMC2-206ENST00000563779 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
CMC2-206ENST00000563779 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
CMC2-206ENST00000563779 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
CMC2-206ENST00000563779 SAMD1Q6SPF0 538 aaPredicted RBP12.12□□□□□ -0.47
CMC2-206ENST00000563779 HOMEZQ8IX15 550 aa12.1□□□□□ -0.47
CMC2-206ENST00000563779 TSHZ2Q9NRE2 1034 aa12.09□□□□□ -0.47
CMC2-206ENST00000563779 VASPP50552 380 aaPredicted RBP12.07□□□□□ -0.48
CMC2-206ENST00000563779 CAPN15O75808 1086 aa12.04□□□□□ -0.48
CMC2-206ENST00000563779 TMEM132AQ24JP5 1023 aa12.04□□□□□ -0.48
CMC2-206ENST00000563779 FBXO3Q9UK99 471 aa12.02□□□□□ -0.48
CMC2-206ENST00000563779 ZBTB4Q9P1Z0 1013 aaPredicted RBP12□□□□□ -0.49
CMC2-206ENST00000563779 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
CMC2-206ENST00000563779 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
CMC2-206ENST00000563779 SPINK5Q9NQ38 1064 aaPredicted RBP11.96□□□□□ -0.49
CMC2-206ENST00000563779 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
CMC2-206ENST00000563779 NBR1Q14596 966 aa11.89□□□□□ -0.51
CMC2-206ENST00000563779 DSG3P32926 999 aa11.88□□□□□ -0.51
CMC2-206ENST00000563779 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
CMC2-206ENST00000563779 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
CMC2-206ENST00000563779 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
CMC2-206ENST00000563779 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
CMC2-206ENST00000563779 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
CMC2-206ENST00000563779 RGL2O15211 777 aa11.79□□□□□ -0.52
CMC2-206ENST00000563779 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
CMC2-206ENST00000563779 PROM2Q8N271 834 aa11.79□□□□□ -0.52
CMC2-206ENST00000563779 ERICH6Q7L0X2 663 aa11.77□□□□□ -0.53
CMC2-206ENST00000563779 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
CMC2-206ENST00000563779 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
CMC2-206ENST00000563779 ABCB7O75027 752 aa11.69□□□□□ -0.54
CMC2-206ENST00000563779 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
CMC2-206ENST00000563779 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
CMC2-206ENST00000563779 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
CMC2-206ENST00000563779 POLA2Q14181 598 aa11.61□□□□□ -0.55
CMC2-206ENST00000563779 ZBTB12Q9Y330 459 aaPredicted RBP11.6□□□□□ -0.55
CMC2-206ENST00000563779 UBTFP17480 764 aaKnown RBP11.59□□□□□ -0.55
CMC2-206ENST00000563779 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
CMC2-206ENST00000563779 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
CMC2-206ENST00000563779 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
CMC2-206ENST00000563779 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms