RNA–Protein interactions for RNA: ENST00000436663.1

PITPNB-204, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 2

Gene PITPNB, Length 590 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-204ENST00000436663 NISCHQ9Y2I1 1504 aa34.77■■■■□ 3.16
PITPNB-204ENST00000436663 ABCC9O60706 1549 aa32.9■■■□□ 2.86
PITPNB-204ENST00000436663 DNAJC5BQ9UF47 199 aa32.06■■■□□ 2.72
PITPNB-204ENST00000436663 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
PITPNB-204ENST00000436663 RB1CC1Q8TDY2 1594 aa30.72■■■□□ 2.51
PITPNB-204ENST00000436663 PABPN1Q86U42 306 aaKnown RBP eCLIP30.48■■■□□ 2.47
PITPNB-204ENST00000436663 DNAJC5Q9H3Z4 198 aa30.24■■■□□ 2.43
PITPNB-204ENST00000436663 NACADO15069 1562 aa30.23■■■□□ 2.43
PITPNB-204ENST00000436663 UNC13AQ9UPW8 1703 aa30.08■■■□□ 2.41
PITPNB-204ENST00000436663 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
PITPNB-204ENST00000436663 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
PITPNB-204ENST00000436663 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
PITPNB-204ENST00000436663 CC2D2AQ9P2K1 1620 aa29.65■■■□□ 2.34
PITPNB-204ENST00000436663 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
PITPNB-204ENST00000436663 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
PITPNB-204ENST00000436663 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
PITPNB-204ENST00000436663 SCRIBQ14160 1630 aa28.81■■■□□ 2.2
PITPNB-204ENST00000436663 CUX2O14529 1486 aa28.8■■■□□ 2.2
PITPNB-204ENST00000436663 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
PITPNB-204ENST00000436663 ZCCHC6Q5VYS8 1495 aaKnown RBP28.54■■■□□ 2.16
PITPNB-204ENST00000436663 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
PITPNB-204ENST00000436663 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
PITPNB-204ENST00000436663 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
PITPNB-204ENST00000436663 NESP48681 1621 aa27.96■■■□□ 2.07
PITPNB-204ENST00000436663 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
PITPNB-204ENST00000436663 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
PITPNB-204ENST00000436663 HMGXB3Q12766 1538 aa27.61■■■□□ 2.01
PITPNB-204ENST00000436663 SMARCA2P51531 1590 aa27.59■■■□□ 2.01
PITPNB-204ENST00000436663 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
PITPNB-204ENST00000436663 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
PITPNB-204ENST00000436663 AEBP2Q6ZN18 517 aaPredicted RBP27.47■■□□□ 1.99
PITPNB-204ENST00000436663 PDS5BQ9NTI5 1447 aa27.37■■□□□ 1.97
PITPNB-204ENST00000436663 SMARCA4P51532 1647 aa27.36■■□□□ 1.97
PITPNB-204ENST00000436663 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
PITPNB-204ENST00000436663 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
PITPNB-204ENST00000436663 OSCARQ8IYS5 282 aa27.32■■□□□ 1.96
PITPNB-204ENST00000436663 MRC2Q9UBG0 1479 aa27.22■■□□□ 1.95
PITPNB-204ENST00000436663 WDR62O43379 1518 aa27.2■■□□□ 1.94
PITPNB-204ENST00000436663 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
PITPNB-204ENST00000436663 RIMBP3CA6NJZ7 1639 aa27.1■■□□□ 1.93
PITPNB-204ENST00000436663 RIMBP3BA6NNM3 1639 aa27.1■■□□□ 1.93
PITPNB-204ENST00000436663 RIMBP3Q9UFD9 1639 aa27.1■■□□□ 1.93
PITPNB-204ENST00000436663 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
PITPNB-204ENST00000436663 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
PITPNB-204ENST00000436663 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
PITPNB-204ENST00000436663 TRHP20396 242 aaPredicted RBP26.84■■□□□ 1.89
PITPNB-204ENST00000436663 MROH2BQ7Z745 1585 aa26.81■■□□□ 1.88
PITPNB-204ENST00000436663 CYB5RLQ6IPT4 315 aa26.79■■□□□ 1.88
PITPNB-204ENST00000436663 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
PITPNB-204ENST00000436663 URB2Q14146 1524 aaKnown RBP26.64■■□□□ 1.85
PITPNB-204ENST00000436663 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
PITPNB-204ENST00000436663 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
PITPNB-204ENST00000436663 CFTRP13569 1480 aa26.5■■□□□ 1.83
PITPNB-204ENST00000436663 WIZO95785 1651 aa26.41■■□□□ 1.82
PITPNB-204ENST00000436663 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
PITPNB-204ENST00000436663 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
PITPNB-204ENST00000436663 CHD1O14646 1710 aa26.28■■□□□ 1.8
PITPNB-204ENST00000436663 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
PITPNB-204ENST00000436663 FBLN2P98095 1184 aa26.14■■□□□ 1.78
PITPNB-204ENST00000436663 AQRO60306 1485 aaKnown RBP eCLIP26.12■■□□□ 1.776e-7■■■□□ 16.7
PITPNB-204ENST00000436663 TOPBP1Q92547 1522 aa26.11■■□□□ 1.77
PITPNB-204ENST00000436663 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
PITPNB-204ENST00000436663 ILDR1Q86SU0 546 aaPredicted RBP26.03■■□□□ 1.76
PITPNB-204ENST00000436663 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
PITPNB-204ENST00000436663 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
PITPNB-204ENST00000436663 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
PITPNB-204ENST00000436663 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
PITPNB-204ENST00000436663 DNMBPQ6XZF7 1577 aa25.88■■□□□ 1.73
PITPNB-204ENST00000436663 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
PITPNB-204ENST00000436663 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
PITPNB-204ENST00000436663 SNAPC4Q5SXM2 1469 aa25.78■■□□□ 1.72
PITPNB-204ENST00000436663 TDRD9Q8NDG6 1382 aaKnown RBP25.77■■□□□ 1.72
PITPNB-204ENST00000436663 POLA1P09884 1462 aaPredicted RBP25.77■■□□□ 1.72
PITPNB-204ENST00000436663 CHMP7Q8WUX9 453 aaPredicted RBP25.75■■□□□ 1.71
PITPNB-204ENST00000436663 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
PITPNB-204ENST00000436663 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
PITPNB-204ENST00000436663 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.7
PITPNB-204ENST00000436663 SOGA1O94964 1423 aa25.63■■□□□ 1.69
PITPNB-204ENST00000436663 MAGI1Q96QZ7 1491 aaPredicted RBP25.63■■□□□ 1.69
PITPNB-204ENST00000436663 KDM4FA0A1W2PPD8 638 aa25.61■■□□□ 1.69
PITPNB-204ENST00000436663 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
PITPNB-204ENST00000436663 KIF13AQ9H1H9 1805 aa25.55■■□□□ 1.68
PITPNB-204ENST00000436663 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
PITPNB-204ENST00000436663 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
PITPNB-204ENST00000436663 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
PITPNB-204ENST00000436663 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
PITPNB-204ENST00000436663 CEP170Q5SW79 1584 aa25.32■■□□□ 1.64
PITPNB-204ENST00000436663 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
PITPNB-204ENST00000436663 FAM69CQ0P6D2 419 aa25.29■■□□□ 1.64
PITPNB-204ENST00000436663 CUX1P39880 1505 aa25.25■■□□□ 1.63
PITPNB-204ENST00000436663 ABCC10Q5T3U5 1492 aa25.24■■□□□ 1.63
PITPNB-204ENST00000436663 KDM6BO15054 1643 aa25.2■■□□□ 1.62
PITPNB-204ENST00000436663 GRIN2AQ12879 1464 aa25.2■■□□□ 1.62
PITPNB-204ENST00000436663 SHROOM2Q13796 1616 aa25.19■■□□□ 1.62
PITPNB-204ENST00000436663 NUP160Q12769 1436 aa25.18■■□□□ 1.62
PITPNB-204ENST00000436663 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
PITPNB-204ENST00000436663 DIP2BQ9P265 1576 aa25.13■■□□□ 1.61
PITPNB-204ENST00000436663 MAPKBP1O60336 1514 aa25.08■■□□□ 1.61
PITPNB-204ENST00000436663 HECW2Q9P2P5 1572 aa25.08■■□□□ 1.61
PITPNB-204ENST00000436663 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms