RNA–Protein interactions for RNA: ENST00000532603.5

PICALM-220, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 4

Gene PICALM, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-220ENST00000532603 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
PICALM-220ENST00000532603 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
PICALM-220ENST00000532603 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
PICALM-220ENST00000532603 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
PICALM-220ENST00000532603 FOXD1Q16676 465 aa20.9■□□□□ 0.94
PICALM-220ENST00000532603 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
PICALM-220ENST00000532603 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
PICALM-220ENST00000532603 ADRA2BP18089 450 aa19.88■□□□□ 0.77
PICALM-220ENST00000532603 PIAS4Q8N2W9 510 aaPredicted RBP19.56■□□□□ 0.72
PICALM-220ENST00000532603 MSH5O43196 834 aa19.24■□□□□ 0.67
PICALM-220ENST00000532603 MAPK8IP2Q13387 824 aaPredicted RBP18.14■□□□□ 0.49
PICALM-220ENST00000532603 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
PICALM-220ENST00000532603 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
PICALM-220ENST00000532603 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
PICALM-220ENST00000532603 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
PICALM-220ENST00000532603 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
PICALM-220ENST00000532603 KCNA4P22459 653 aa17.46■□□□□ 0.39
PICALM-220ENST00000532603 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
PICALM-220ENST00000532603 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
PICALM-220ENST00000532603 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
PICALM-220ENST00000532603 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
PICALM-220ENST00000532603 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
PICALM-220ENST00000532603 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
PICALM-220ENST00000532603 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
PICALM-220ENST00000532603 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
PICALM-220ENST00000532603 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
PICALM-220ENST00000532603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.231e-7■□□□□ 9.9
PICALM-220ENST00000532603 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
PICALM-220ENST00000532603 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
PICALM-220ENST00000532603 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
PICALM-220ENST00000532603 ZBTB22O15209 634 aa16.16■□□□□ 0.18
PICALM-220ENST00000532603 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
PICALM-220ENST00000532603 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
PICALM-220ENST00000532603 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
PICALM-220ENST00000532603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
PICALM-220ENST00000532603 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
PICALM-220ENST00000532603 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
PICALM-220ENST00000532603 CAPN15O75808 1086 aa15.76■□□□□ 0.11
PICALM-220ENST00000532603 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
PICALM-220ENST00000532603 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
PICALM-220ENST00000532603 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
PICALM-220ENST00000532603 DSG3P32926 999 aa15.67■□□□□ 0.1
PICALM-220ENST00000532603 APLP2Q06481 763 aa15.66■□□□□ 0.1
PICALM-220ENST00000532603 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
PICALM-220ENST00000532603 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
PICALM-220ENST00000532603 ABCB7O75027 752 aa15.52■□□□□ 0.08
PICALM-220ENST00000532603 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
PICALM-220ENST00000532603 POLA2Q14181 598 aa15.36■□□□□ 0.05
PICALM-220ENST00000532603 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
PICALM-220ENST00000532603 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
PICALM-220ENST00000532603 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
PICALM-220ENST00000532603 FBLN2P98095 1184 aa14.82□□□□□ -0.04
PICALM-220ENST00000532603 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
PICALM-220ENST00000532603 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
PICALM-220ENST00000532603 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
PICALM-220ENST00000532603 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
PICALM-220ENST00000532603 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
PICALM-220ENST00000532603 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
PICALM-220ENST00000532603 REM2Q8IYK8 340 aaPredicted RBP14.53□□□□□ -0.08
PICALM-220ENST00000532603 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
PICALM-220ENST00000532603 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
PICALM-220ENST00000532603 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
PICALM-220ENST00000532603 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
PICALM-220ENST00000532603 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
PICALM-220ENST00000532603 PROM2Q8N271 834 aa14.24□□□□□ -0.13
PICALM-220ENST00000532603 POTEHQ6S545 545 aa14.23□□□□□ -0.13
PICALM-220ENST00000532603 SPDYE1Q8NFV5 336 aaPredicted RBP14.23□□□□□ -0.13
PICALM-220ENST00000532603 PIP4P2Q8N4L2 257 aa14.18□□□□□ -0.14
PICALM-220ENST00000532603 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
PICALM-220ENST00000532603 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
PICALM-220ENST00000532603 FKBP8Q14318 412 aa14.17□□□□□ -0.14
PICALM-220ENST00000532603 PRR29P0C7W0 189 aa14□□□□□ -0.17
PICALM-220ENST00000532603 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
PICALM-220ENST00000532603 CHADLQ6NUI6 762 aa13.96□□□□□ -0.17
PICALM-220ENST00000532603 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
PICALM-220ENST00000532603 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
PICALM-220ENST00000532603 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
PICALM-220ENST00000532603 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
PICALM-220ENST00000532603 EVX2Q03828 476 aa13.75□□□□□ -0.21
PICALM-220ENST00000532603 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
PICALM-220ENST00000532603 HAX1O00165 279 aa13.68□□□□□ -0.22
PICALM-220ENST00000532603 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
PICALM-220ENST00000532603 MIER1Q8N108 512 aa13.61□□□□□ -0.23
PICALM-220ENST00000532603 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
PICALM-220ENST00000532603 SP7Q8TDD2 431 aaPredicted RBP13.56□□□□□ -0.24
PICALM-220ENST00000532603 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
PICALM-220ENST00000532603 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
PICALM-220ENST00000532603 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
PICALM-220ENST00000532603 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
PICALM-220ENST00000532603 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
PICALM-220ENST00000532603 NUBP1P53384 320 aa13.43□□□□□ -0.26
PICALM-220ENST00000532603 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
PICALM-220ENST00000532603 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
PICALM-220ENST00000532603 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
PICALM-220ENST00000532603 GABBR2O75899 941 aa13.36□□□□□ -0.27
PICALM-220ENST00000532603 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
PICALM-220ENST00000532603 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
PICALM-220ENST00000532603 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
PICALM-220ENST00000532603 CCDC61Q9Y6R9 512 aa13.33□□□□□ -0.28
PICALM-220ENST00000532603 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms