RNA–Protein interactions for RNA: ENST00000358604.7

CBWD2-202, Transcript of COBW domain containing 2, humanhuman

TSL 1 (best)

Gene CBWD2, Length 1,740 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2-202ENST00000358604 NISCHQ9Y2I1 1504 aa44.65■■■■■ 4.74
CBWD2-202ENST00000358604 CCDC180Q9P1Z9 1646 aa39.41■■■■□ 3.9
CBWD2-202ENST00000358604 ABCC9O60706 1549 aa38.5■■■■□ 3.75
CBWD2-202ENST00000358604 DCAF8L2P0C7V8 631 aa37.38■■■■□ 3.57
CBWD2-202ENST00000358604 ZCCHC6Q5VYS8 1495 aaKnown RBP37.27■■■■□ 3.56
CBWD2-202ENST00000358604 NACADO15069 1562 aa36.99■■■■□ 3.51
CBWD2-202ENST00000358604 RB1CC1Q8TDY2 1594 aa36.97■■■■□ 3.51
CBWD2-202ENST00000358604 DCAF1Q9Y4B6 1507 aa36.81■■■■□ 3.48
CBWD2-202ENST00000358604 MYO15BQ96JP2 1530 aa36.79■■■■□ 3.48
CBWD2-202ENST00000358604 UNC13AQ9UPW8 1703 aa36.27■■■■□ 3.4
CBWD2-202ENST00000358604 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
CBWD2-202ENST00000358604 PABPN1Q86U42 306 aaKnown RBP eCLIP36.11■■■■□ 3.37
CBWD2-202ENST00000358604 BICRAQ9NZM4 1560 aa35.97■■■■□ 3.35
CBWD2-202ENST00000358604 SHROOM4Q9ULL8 1493 aa35.77■■■■□ 3.32
CBWD2-202ENST00000358604 DNAJC5BQ9UF47 199 aa35.11■■■■□ 3.21
CBWD2-202ENST00000358604 EIF4G1Q04637 1599 aaKnown RBP34.96■■■■□ 3.19
CBWD2-202ENST00000358604 CECR2Q9BXF3 1484 aa34.9■■■■□ 3.18
CBWD2-202ENST00000358604 CC2D2AQ9P2K1 1620 aa34.76■■■■□ 3.15
CBWD2-202ENST00000358604 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
CBWD2-202ENST00000358604 BAZ1AQ9NRL2 1556 aaPredicted RBP34.53■■■■□ 3.12
CBWD2-202ENST00000358604 MROH2BQ7Z745 1585 aa34.52■■■■□ 3.12
CBWD2-202ENST00000358604 ATAD2BQ9ULI0 1458 aa34.31■■■■□ 3.08
CBWD2-202ENST00000358604 RSF1Q96T23 1441 aaPredicted RBP34.22■■■■□ 3.07
CBWD2-202ENST00000358604 SMARCA2P51531 1590 aa34.19■■■■□ 3.06
CBWD2-202ENST00000358604 WIZO95785 1651 aa34.18■■■■□ 3.06
CBWD2-202ENST00000358604 NCAPD3P42695 1498 aa34.17■■■■□ 3.06
CBWD2-202ENST00000358604 PEG3Q9GZU2 1588 aa34.14■■■■□ 3.06
CBWD2-202ENST00000358604 BAZ1BQ9UIG0 1483 aaKnown RBP34.04■■■■□ 3.04
CBWD2-202ENST00000358604 HMGXB3Q12766 1538 aa34.01■■■■□ 3.03
CBWD2-202ENST00000358604 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
CBWD2-202ENST00000358604 TOP2AP11388 1531 aaKnown RBP33.72■■■□□ 2.99
CBWD2-202ENST00000358604 NESP48681 1621 aa33.45■■■□□ 2.95
CBWD2-202ENST00000358604 CCDC88BA6NC98 1476 aa33.4■■■□□ 2.94
CBWD2-202ENST00000358604 CADPSQ9ULU8 1353 aa33.23■■■□□ 2.91
CBWD2-202ENST00000358604 LAMC3Q9Y6N6 1575 aa33.18■■■□□ 2.9
CBWD2-202ENST00000358604 CFTRP13569 1480 aa33.1■■■□□ 2.89
CBWD2-202ENST00000358604 ERCC6Q03468 1493 aa33.06■■■□□ 2.88
CBWD2-202ENST00000358604 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
CBWD2-202ENST00000358604 PDS5BQ9NTI5 1447 aa32.97■■■□□ 2.87
CBWD2-202ENST00000358604 FANCD2Q9BXW9 1451 aa32.89■■■□□ 2.86
CBWD2-202ENST00000358604 PRDM2Q13029 1718 aa32.82■■■□□ 2.84
CBWD2-202ENST00000358604 CEP164Q9UPV0 1460 aa32.78■■■□□ 2.84
CBWD2-202ENST00000358604 THOC2Q8NI27 1593 aaKnown RBP32.74■■■□□ 2.83
CBWD2-202ENST00000358604 MRC2Q9UBG0 1479 aa32.65■■■□□ 2.82
CBWD2-202ENST00000358604 URB2Q14146 1524 aaKnown RBP32.59■■■□□ 2.81
CBWD2-202ENST00000358604 WDR62O43379 1518 aa32.52■■■□□ 2.8
CBWD2-202ENST00000358604 CUX2O14529 1486 aa32.45■■■□□ 2.79
CBWD2-202ENST00000358604 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
CBWD2-202ENST00000358604 ABCC8Q09428 1581 aa32.38■■■□□ 2.77
CBWD2-202ENST00000358604 DNMBPQ6XZF7 1577 aa32.35■■■□□ 2.77
CBWD2-202ENST00000358604 CUX1P39880 1505 aa32.34■■■□□ 2.77
CBWD2-202ENST00000358604 WRNQ14191 1432 aaPredicted RBP eCLIP32.21■■■□□ 2.75
CBWD2-202ENST00000358604 SYNJ1O43426 1573 aa32.2■■■□□ 2.74
CBWD2-202ENST00000358604 POLA1P09884 1462 aaPredicted RBP32.18■■■□□ 2.74
CBWD2-202ENST00000358604 FGD5Q6ZNL6 1462 aa32.16■■■□□ 2.74
CBWD2-202ENST00000358604 RAD54L2Q9Y4B4 1467 aa32.12■■■□□ 2.73
CBWD2-202ENST00000358604 TOP2BQ02880 1626 aa32.08■■■□□ 2.73
CBWD2-202ENST00000358604 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
CBWD2-202ENST00000358604 IFT140Q96RY7 1462 aa32.04■■■□□ 2.72
CBWD2-202ENST00000358604 ZNF608Q9ULD9 1512 aaPredicted RBP32.04■■■□□ 2.72
CBWD2-202ENST00000358604 SOGA1O94964 1423 aa32.03■■■□□ 2.72
CBWD2-202ENST00000358604 TARBP1Q13395 1621 aaKnown RBP32.02■■■□□ 2.72
CBWD2-202ENST00000358604 TDRD9Q8NDG6 1382 aaKnown RBP31.9■■■□□ 2.7
CBWD2-202ENST00000358604 AQRO60306 1485 aaKnown RBP eCLIP31.89■■■□□ 2.74e-10■■■■□ 20.7
CBWD2-202ENST00000358604 EIF4G3O43432 1585 aaKnown RBP31.84■■■□□ 2.69
CBWD2-202ENST00000358604 WDR97A6NE52 1622 aa31.82■■■□□ 2.68
CBWD2-202ENST00000358604 ABCA10Q8WWZ4 1543 aa31.79■■■□□ 2.68
CBWD2-202ENST00000358604 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
CBWD2-202ENST00000358604 CHIC1Q5VXU3 224 aa31.66■■■□□ 2.66
CBWD2-202ENST00000358604 ABCA5Q8WWZ7 1642 aa31.65■■■□□ 2.66
CBWD2-202ENST00000358604 GAPVD1Q14C86 1478 aa31.65■■■□□ 2.66
CBWD2-202ENST00000358604 PBRM1Q86U86 1689 aa31.57■■■□□ 2.64
CBWD2-202ENST00000358604 GRIN2BQ13224 1484 aa31.56■■■□□ 2.64
CBWD2-202ENST00000358604 SNAPC4Q5SXM2 1469 aa31.56■■■□□ 2.64
CBWD2-202ENST00000358604 RUSC2Q8N2Y8 1516 aa31.51■■■□□ 2.63
CBWD2-202ENST00000358604 FBLN2P98095 1184 aa31.47■■■□□ 2.63
CBWD2-202ENST00000358604 KIF27Q86VH2 1401 aa31.47■■■□□ 2.63
CBWD2-202ENST00000358604 MAGI1Q96QZ7 1491 aaPredicted RBP31.41■■■□□ 2.62
CBWD2-202ENST00000358604 CHD1O14646 1710 aa31.39■■■□□ 2.62
CBWD2-202ENST00000358604 ERICH3Q5RHP9 1530 aa31.37■■■□□ 2.61
CBWD2-202ENST00000358604 IGF1RP08069 1367 aa31.37■■■□□ 2.61
CBWD2-202ENST00000358604 CHMP7Q8WUX9 453 aaPredicted RBP31.34■■■□□ 2.61
CBWD2-202ENST00000358604 ADAMTS12P58397 1594 aa31.34■■■□□ 2.61
CBWD2-202ENST00000358604 SYNJ2O15056 1496 aa31.32■■■□□ 2.6
CBWD2-202ENST00000358604 FAM9AQ8IZU1 332 aaPredicted RBP31.27■■■□□ 2.6
CBWD2-202ENST00000358604 OSCARQ8IYS5 282 aa31.27■■■□□ 2.6
CBWD2-202ENST00000358604 FHAD1B1AJZ9 1412 aa31.26■■■□□ 2.59
CBWD2-202ENST00000358604 GRIN2AQ12879 1464 aa31.19■■■□□ 2.58
CBWD2-202ENST00000358604 CARMIL1Q5VZK9 1371 aa31.17■■■□□ 2.58
CBWD2-202ENST00000358604 DNAJC5Q9H3Z4 198 aa31.16■■■□□ 2.58
CBWD2-202ENST00000358604 CUL7Q14999 1698 aa31.15■■■□□ 2.58
CBWD2-202ENST00000358604 CEP170Q5SW79 1584 aa31.08■■■□□ 2.57
CBWD2-202ENST00000358604 CSRNP3Q8WYN3 585 aa31.07■■■□□ 2.56
CBWD2-202ENST00000358604 NUP160Q12769 1436 aa31.01■■■□□ 2.55
CBWD2-202ENST00000358604 CLASP1Q7Z460 1538 aa31■■■□□ 2.55
CBWD2-202ENST00000358604 EEA1Q15075 1411 aa31■■■□□ 2.55
CBWD2-202ENST00000358604 PRXQ9BXM0 1461 aa30.99■■■□□ 2.55
CBWD2-202ENST00000358604 RAPGEF2Q9Y4G8 1499 aa30.99■■■□□ 2.55
CBWD2-202ENST00000358604 EHMT2Q96KQ7 1210 aa30.98■■■□□ 2.55
CBWD2-202ENST00000358604 ARHGEF11O15085 1522 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 307.7 ms