RNA–Protein interactions for RNA: ENST00000491994.1

SKIV2L-213, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-213ENST00000491994 NISCHQ9Y2I1 1504 aa37.65■■■■□ 3.62
SKIV2L-213ENST00000491994 CCDC180Q9P1Z9 1646 aa33.48■■■□□ 2.95
SKIV2L-213ENST00000491994 ABCC9O60706 1549 aa33.18■■■□□ 2.9
SKIV2L-213ENST00000491994 RB1CC1Q8TDY2 1594 aa31.77■■■□□ 2.68
SKIV2L-213ENST00000491994 DCAF8L2P0C7V8 631 aa31.73■■■□□ 2.67
SKIV2L-213ENST00000491994 NACADO15069 1562 aa31.69■■■□□ 2.66
SKIV2L-213ENST00000491994 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
SKIV2L-213ENST00000491994 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
SKIV2L-213ENST00000491994 DCAF1Q9Y4B6 1507 aa31.17■■■□□ 2.58
SKIV2L-213ENST00000491994 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.562e-6■■■□□ 17.4
SKIV2L-213ENST00000491994 DNAJC5BQ9UF47 199 aa30.93■■■□□ 2.54
SKIV2L-213ENST00000491994 UNC13AQ9UPW8 1703 aa30.83■■■□□ 2.53
SKIV2L-213ENST00000491994 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
SKIV2L-213ENST00000491994 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.48
SKIV2L-213ENST00000491994 SCRIBQ14160 1630 aa30.48■■■□□ 2.47
SKIV2L-213ENST00000491994 EIF4G1Q04637 1599 aaKnown RBP30.01■■■□□ 2.39
SKIV2L-213ENST00000491994 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
SKIV2L-213ENST00000491994 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
SKIV2L-213ENST00000491994 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
SKIV2L-213ENST00000491994 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
SKIV2L-213ENST00000491994 SMARCA4P51532 1647 aa29.18■■■□□ 2.26
SKIV2L-213ENST00000491994 BAZ1AQ9NRL2 1556 aaPredicted RBP29.17■■■□□ 2.26
SKIV2L-213ENST00000491994 SMARCA2P51531 1590 aa29.14■■■□□ 2.26
SKIV2L-213ENST00000491994 HMGXB3Q12766 1538 aa29.02■■■□□ 2.24
SKIV2L-213ENST00000491994 MROH2BQ7Z745 1585 aa28.97■■■□□ 2.23
SKIV2L-213ENST00000491994 PEG3Q9GZU2 1588 aa28.97■■■□□ 2.23
SKIV2L-213ENST00000491994 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
SKIV2L-213ENST00000491994 ERCC6Q03468 1493 aa28.64■■■□□ 2.17
SKIV2L-213ENST00000491994 NESP48681 1621 aa28.6■■■□□ 2.17
SKIV2L-213ENST00000491994 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
SKIV2L-213ENST00000491994 WIZO95785 1651 aa28.56■■■□□ 2.16
SKIV2L-213ENST00000491994 CUX2O14529 1486 aa28.51■■■□□ 2.15
SKIV2L-213ENST00000491994 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
SKIV2L-213ENST00000491994 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
SKIV2L-213ENST00000491994 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
SKIV2L-213ENST00000491994 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
SKIV2L-213ENST00000491994 DNAJC5Q9H3Z4 198 aa28.21■■■□□ 2.11
SKIV2L-213ENST00000491994 CFTRP13569 1480 aa28.18■■■□□ 2.1
SKIV2L-213ENST00000491994 THOC2Q8NI27 1593 aaKnown RBP28.15■■■□□ 2.1
SKIV2L-213ENST00000491994 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
SKIV2L-213ENST00000491994 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
SKIV2L-213ENST00000491994 FANCD2Q9BXW9 1451 aa28.05■■■□□ 2.08
SKIV2L-213ENST00000491994 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
SKIV2L-213ENST00000491994 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
SKIV2L-213ENST00000491994 WDR62O43379 1518 aa27.93■■■□□ 2.06
SKIV2L-213ENST00000491994 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
SKIV2L-213ENST00000491994 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
SKIV2L-213ENST00000491994 PRDM2Q13029 1718 aa27.64■■■□□ 2.01
SKIV2L-213ENST00000491994 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
SKIV2L-213ENST00000491994 TOPBP1Q92547 1522 aa27.54■■■□□ 2
SKIV2L-213ENST00000491994 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
SKIV2L-213ENST00000491994 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
SKIV2L-213ENST00000491994 DNMBPQ6XZF7 1577 aa27.43■■□□□ 1.98
SKIV2L-213ENST00000491994 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
SKIV2L-213ENST00000491994 POLA1P09884 1462 aaPredicted RBP27.28■■□□□ 1.96
SKIV2L-213ENST00000491994 SOGA1O94964 1423 aa27.27■■□□□ 1.96
SKIV2L-213ENST00000491994 TARBP1Q13395 1621 aaKnown RBP27.22■■□□□ 1.95
SKIV2L-213ENST00000491994 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.95
SKIV2L-213ENST00000491994 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
SKIV2L-213ENST00000491994 CUX1P39880 1505 aa27.17■■□□□ 1.94
SKIV2L-213ENST00000491994 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
SKIV2L-213ENST00000491994 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
SKIV2L-213ENST00000491994 EIF4G3O43432 1585 aaKnown RBP27.1■■□□□ 1.93
SKIV2L-213ENST00000491994 WDR97A6NE52 1622 aa27.01■■□□□ 1.92
SKIV2L-213ENST00000491994 FBLN2P98095 1184 aa27.01■■□□□ 1.91
SKIV2L-213ENST00000491994 TRIM41Q8WV44 630 aa26.99■■□□□ 1.91
SKIV2L-213ENST00000491994 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
SKIV2L-213ENST00000491994 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
SKIV2L-213ENST00000491994 CHMP7Q8WUX9 453 aaPredicted RBP26.93■■□□□ 1.9
SKIV2L-213ENST00000491994 ABCA10Q8WWZ4 1543 aa26.92■■□□□ 1.9
SKIV2L-213ENST00000491994 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
SKIV2L-213ENST00000491994 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
SKIV2L-213ENST00000491994 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
SKIV2L-213ENST00000491994 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
SKIV2L-213ENST00000491994 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
SKIV2L-213ENST00000491994 SYNJ2O15056 1496 aa26.79■■□□□ 1.88
SKIV2L-213ENST00000491994 CHD1O14646 1710 aa26.78■■□□□ 1.88
SKIV2L-213ENST00000491994 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
SKIV2L-213ENST00000491994 ARHGEF11O15085 1522 aa26.76■■□□□ 1.87
SKIV2L-213ENST00000491994 RIMBP3CA6NJZ7 1639 aa26.74■■□□□ 1.87
SKIV2L-213ENST00000491994 RIMBP3BA6NNM3 1639 aa26.74■■□□□ 1.87
SKIV2L-213ENST00000491994 RIMBP3Q9UFD9 1639 aa26.74■■□□□ 1.87
SKIV2L-213ENST00000491994 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
SKIV2L-213ENST00000491994 CYB5RLQ6IPT4 315 aa26.71■■□□□ 1.87
SKIV2L-213ENST00000491994 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
SKIV2L-213ENST00000491994 CLASP1Q7Z460 1538 aa26.61■■□□□ 1.85
SKIV2L-213ENST00000491994 FHAD1B1AJZ9 1412 aa26.6■■□□□ 1.85
SKIV2L-213ENST00000491994 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
SKIV2L-213ENST00000491994 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
SKIV2L-213ENST00000491994 ARAP1Q96P48 1450 aa26.52■■□□□ 1.84
SKIV2L-213ENST00000491994 NUP160Q12769 1436 aa26.48■■□□□ 1.83
SKIV2L-213ENST00000491994 ADAMTS12P58397 1594 aa26.47■■□□□ 1.83
SKIV2L-213ENST00000491994 IGF1RP08069 1367 aa26.46■■□□□ 1.83
SKIV2L-213ENST00000491994 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
SKIV2L-213ENST00000491994 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
SKIV2L-213ENST00000491994 CEP170Q5SW79 1584 aa26.36■■□□□ 1.81
SKIV2L-213ENST00000491994 CARMIL1Q5VZK9 1371 aa26.26■■□□□ 1.79
SKIV2L-213ENST00000491994 TRHP20396 242 aaPredicted RBP26.25■■□□□ 1.79
SKIV2L-213ENST00000491994 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
SKIV2L-213ENST00000491994 SHROOM2Q13796 1616 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms