RNA–Protein interactions for RNA: ENST00000249647.7

SNAP23-201, Transcript of synaptosome associated protein 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAP23, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-201ENST00000249647 NISCHQ9Y2I1 1504 aa35.7■■■■□ 3.31
SNAP23-201ENST00000249647 CCDC180Q9P1Z9 1646 aa31.1■■■□□ 2.57
SNAP23-201ENST00000249647 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
SNAP23-201ENST00000249647 SUPT5HO00267 1087 aaKnown RBP30.59■■■□□ 2.49
SNAP23-201ENST00000249647 ZCCHC6Q5VYS8 1495 aaKnown RBP30.05■■■□□ 2.4
SNAP23-201ENST00000249647 CHIC1Q5VXU3 224 aa29.84■■■□□ 2.37
SNAP23-201ENST00000249647 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
SNAP23-201ENST00000249647 HRCP23327 699 aa29.73■■■□□ 2.35
SNAP23-201ENST00000249647 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
SNAP23-201ENST00000249647 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
SNAP23-201ENST00000249647 PCGF6Q9BYE7 350 aa29.51■■■□□ 2.31
SNAP23-201ENST00000249647 ABCC9O60706 1549 aa29.22■■■□□ 2.27
SNAP23-201ENST00000249647 PPARGC1BQ86YN6 1023 aaKnown RBP29.15■■■□□ 2.26
SNAP23-201ENST00000249647 LOC105371045A0A1W2PR82 267 aa29.09■■■□□ 2.25
SNAP23-201ENST00000249647 NACADO15069 1562 aa28.96■■■□□ 2.23
SNAP23-201ENST00000249647 TRIM26Q12899 539 aaPredicted RBP28.73■■■□□ 2.19
SNAP23-201ENST00000249647 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
SNAP23-201ENST00000249647 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
SNAP23-201ENST00000249647 TRIM41Q8WV44 630 aa28.37■■■□□ 2.13
SNAP23-201ENST00000249647 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
SNAP23-201ENST00000249647 FAM9AQ8IZU1 332 aaPredicted RBP28.29■■■□□ 2.12
SNAP23-201ENST00000249647 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
SNAP23-201ENST00000249647 EHMT2Q96KQ7 1210 aa28.14■■■□□ 2.09
SNAP23-201ENST00000249647 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
SNAP23-201ENST00000249647 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
SNAP23-201ENST00000249647 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
SNAP23-201ENST00000249647 SCAF1Q9H7N4 1312 aaKnown RBP27.73■■■□□ 2.03
SNAP23-201ENST00000249647 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
SNAP23-201ENST00000249647 PELP1Q8IZL8 1130 aaKnown RBP27.64■■■□□ 2.01
SNAP23-201ENST00000249647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.59■■■□□ 2.01
SNAP23-201ENST00000249647 PABPN1Q86U42 306 aaKnown RBP eCLIP27.56■■■□□ 2
SNAP23-201ENST00000249647 CCER1Q8TC90 406 aaPredicted RBP27.54■■■□□ 2
SNAP23-201ENST00000249647 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
SNAP23-201ENST00000249647 WIZO95785 1651 aa27.49■■□□□ 1.99
SNAP23-201ENST00000249647 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
SNAP23-201ENST00000249647 TTBK1Q5TCY1 1321 aaPredicted RBP27.33■■□□□ 1.97
SNAP23-201ENST00000249647 ACIN1Q9UKV3 1341 aaKnown RBP27.29■■□□□ 1.96
SNAP23-201ENST00000249647 NEUROD1Q13562 356 aa27.25■■□□□ 1.95
SNAP23-201ENST00000249647 DIEXFQ68CQ4 756 aaKnown RBP27.23■■□□□ 1.95
SNAP23-201ENST00000249647 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
SNAP23-201ENST00000249647 PEG3Q9GZU2 1588 aa27.16■■□□□ 1.94
SNAP23-201ENST00000249647 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
SNAP23-201ENST00000249647 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
SNAP23-201ENST00000249647 WRNQ14191 1432 aaPredicted RBP eCLIP27.1■■□□□ 1.93
SNAP23-201ENST00000249647 CEP162Q5TB80 1403 aa27.1■■□□□ 1.93
SNAP23-201ENST00000249647 CENPBP07199 599 aaPredicted RBP27.07■■□□□ 1.92
SNAP23-201ENST00000249647 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
SNAP23-201ENST00000249647 GTF3C3Q9Y5Q9 886 aa27.04■■□□□ 1.92
SNAP23-201ENST00000249647 SOGA1O94964 1423 aa27.03■■□□□ 1.92
SNAP23-201ENST00000249647 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
SNAP23-201ENST00000249647 TNIKQ9UKE5 1360 aa27■■□□□ 1.91
SNAP23-201ENST00000249647 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
SNAP23-201ENST00000249647 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
SNAP23-201ENST00000249647 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
SNAP23-201ENST00000249647 ZNF316A6NFI3 1004 aaPredicted RBP26.87■■□□□ 1.89
SNAP23-201ENST00000249647 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
SNAP23-201ENST00000249647 EEA1Q15075 1411 aa26.82■■□□□ 1.88
SNAP23-201ENST00000249647 NCAPD3P42695 1498 aa26.76■■□□□ 1.88
SNAP23-201ENST00000249647 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
SNAP23-201ENST00000249647 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
SNAP23-201ENST00000249647 HNRNPUL2Q1KMD3 747 aaKnown RBP26.72■■□□□ 1.87
SNAP23-201ENST00000249647 YTHDC1Q96MU7 727 aaKnown RBP26.72■■□□□ 1.87
SNAP23-201ENST00000249647 HMGXB3Q12766 1538 aa26.7■■□□□ 1.86
SNAP23-201ENST00000249647 MIER1Q8N108 512 aa26.59■■□□□ 1.85
SNAP23-201ENST00000249647 CLIP1P30622 1438 aa26.51■■□□□ 1.83
SNAP23-201ENST00000249647 CEP164Q9UPV0 1460 aa26.51■■□□□ 1.83
SNAP23-201ENST00000249647 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
SNAP23-201ENST00000249647 APLP2Q06481 763 aa26.5■■□□□ 1.83
SNAP23-201ENST00000249647 RANGAP1P46060 587 aaPredicted RBP26.48■■□□□ 1.83
SNAP23-201ENST00000249647 VPS8Q8N3P4 1428 aa26.4■■□□□ 1.82
SNAP23-201ENST00000249647 SYNJ1O43426 1573 aa26.39■■□□□ 1.81
SNAP23-201ENST00000249647 KIF21BO75037 1637 aa26.37■■□□□ 1.81
SNAP23-201ENST00000249647 MYT1Q01538 1121 aa26.33■■□□□ 1.81
SNAP23-201ENST00000249647 RAPGEF2Q9Y4G8 1499 aa26.31■■□□□ 1.8
SNAP23-201ENST00000249647 CFTRP13569 1480 aa26.16■■□□□ 1.78
SNAP23-201ENST00000249647 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
SNAP23-201ENST00000249647 CLSPNQ9HAW4 1339 aa26.09■■□□□ 1.77
SNAP23-201ENST00000249647 KANK4Q5T7N3 995 aaPredicted RBP26.06■■□□□ 1.76
SNAP23-201ENST00000249647 CADPSQ9ULU8 1353 aa26.03■■□□□ 1.76
SNAP23-201ENST00000249647 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
SNAP23-201ENST00000249647 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
SNAP23-201ENST00000249647 ARAP1Q96P48 1450 aa25.95■■□□□ 1.74
SNAP23-201ENST00000249647 PRXQ9BXM0 1461 aa25.92■■□□□ 1.74
SNAP23-201ENST00000249647 SUPT16HQ9Y5B9 1047 aaKnown RBP25.9■■□□□ 1.74
SNAP23-201ENST00000249647 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
SNAP23-201ENST00000249647 ITGAEP38570 1179 aa25.87■■□□□ 1.73
SNAP23-201ENST00000249647 BIVM-ERCC5R4GMW8 1640 aa25.83■■□□□ 1.73
SNAP23-201ENST00000249647 RRBP1Q9P2E9 1410 aaKnown RBP25.83■■□□□ 1.73
SNAP23-201ENST00000249647 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
SNAP23-201ENST00000249647 CCNB3Q8WWL7 1395 aa25.78■■□□□ 1.72
SNAP23-201ENST00000249647 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
SNAP23-201ENST00000249647 CUX1P39880 1505 aa25.76■■□□□ 1.71
SNAP23-201ENST00000249647 KIF27Q86VH2 1401 aa25.75■■□□□ 1.71
SNAP23-201ENST00000249647 NESP48681 1621 aa25.71■■□□□ 1.71
SNAP23-201ENST00000249647 FANCD2Q9BXW9 1451 aa25.71■■□□□ 1.71
SNAP23-201ENST00000249647 CUX2O14529 1486 aa25.69■■□□□ 1.7
SNAP23-201ENST00000249647 KCNH8Q96L42 1107 aa25.67■■□□□ 1.7
SNAP23-201ENST00000249647 ARHGAP35Q9NRY4 1499 aa25.67■■□□□ 1.7
SNAP23-201ENST00000249647 RAB3GAP2Q9H2M9 1393 aa25.64■■□□□ 1.69
SNAP23-201ENST00000249647 TSHZ2Q9NRE2 1034 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms