Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.83□□□□□ -1.324e-20■■□□□ 13
U2AF2P26368 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.794e-20■■□□□ 13
U2AF2P26368 VDAC1-204ENST00000425992 703 ntTSL 326.53■■□□□ 1.848e-10■■□□□ 13
U2AF2P26368 VDAC1-205ENST00000466080 831 ntTSL 37.9□□□□□ -1.148e-10■■□□□ 13
U2AF2P26368 STK39-203ENST00000487143 2214 ntTSL 1 (best)6.88□□□□□ -1.311e-6■■□□□ 13
U2AF2P26368 UBXN1-211ENST00000531056 560 ntTSL 421.29■■□□□ 19e-8■■□□□ 13
U2AF2P26368 UBXN1-216ENST00000533908 739 ntTSL 1 (best)19.79■□□□□ 0.769e-8■■□□□ 13
U2AF2P26368 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.724e-11■■□□□ 13
U2AF2P26368 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.54■□□□□ 0.564e-11■■□□□ 13
U2AF2P26368 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.94■□□□□ 0.464e-11■■□□□ 13
U2AF2P26368 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.58■□□□□ 0.44e-11■■□□□ 13
U2AF2P26368 UBXN1-207ENST00000526919 759 ntTSL 317.43■□□□□ 0.389e-8■■□□□ 13
U2AF2P26368 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.08■□□□□ 0.324e-11■■□□□ 13
U2AF2P26368 UBXN1-209ENST00000528907 861 ntTSL 216.45■□□□□ 0.229e-8■■□□□ 13
U2AF2P26368 PTGES3-206ENST00000537473 2939 ntTSL 216.44■□□□□ 0.224e-11■■□□□ 13
U2AF2P26368 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.15■□□□□ 0.024e-11■■□□□ 13
U2AF2P26368 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.519e-8■■□□□ 13
U2AF2P26368 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.529e-8■■□□□ 13
U2AF2P26368 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.869e-8■■□□□ 13
U2AF2P26368 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.889e-8■■□□□ 13
U2AF2P26368 NUP98-219ENST00000532475 553 ntTSL 48.99□□□□□ -0.974e-11■■□□□ 13
U2AF2P26368 CLK1-209ENST00000472679 461 ntTSL 22.88□□□□□ -1.954e-11■■□□□ 13
U2AF2P26368 CLK1-208ENST00000464454 484 ntTSL 22.49□□□□□ -2.014e-11■■□□□ 13
U2AF2P26368 CLK1-206ENST00000461326 435 ntTSL 22.42□□□□□ -2.024e-11■■□□□ 13
U2AF2P26368 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.732e-6■■□□□ 13
U2AF2P26368 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.08■□□□□ 0.482e-6■■□□□ 13
U2AF2P26368 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.23■□□□□ 0.351e-7■■□□□ 13
U2AF2P26368 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.352e-6■■□□□ 13
U2AF2P26368 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.151e-7■■□□□ 13
U2AF2P26368 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.122e-6■■□□□ 13
U2AF2P26368 SNRNP27-203ENST00000450162 766 ntTSL 214.77□□□□□ -0.051e-7■■□□□ 13
U2AF2P26368 KIF1B-213ENST00000635499 2098 ntTSL 512.68□□□□□ -0.382e-8■■□□□ 13
U2AF2P26368 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.13■■□□□ 1.453e-6■■□□□ 13
U2AF2P26368 CLK3-225ENST00000569063 833 ntTSL 522.69■■□□□ 1.223e-6■■□□□ 13
U2AF2P26368 CLK3-221ENST00000568139 918 ntTSL 519.2■□□□□ 0.663e-6■■□□□ 13
U2AF2P26368 CLK3-210ENST00000563112 665 ntTSL 318.73■□□□□ 0.593e-6■■□□□ 13
U2AF2P26368 CLK3-217ENST00000566126 732 ntTSL 518.28■□□□□ 0.523e-6■■□□□ 13
U2AF2P26368 CLK3-223ENST00000568488 481 ntTSL 317.66■□□□□ 0.423e-6■■□□□ 13
U2AF2P26368 CLK3-211ENST00000563297 526 ntTSL 417.36■□□□□ 0.373e-6■■□□□ 13
U2AF2P26368 CLK3-204ENST00000483723 1749 ntTSL 216.29■□□□□ 0.23e-6■■□□□ 13
U2AF2P26368 CLK3-209ENST00000562670 544 ntTSL 416.08■□□□□ 0.163e-6■■□□□ 13
U2AF2P26368 CLK3-203ENST00000454830 3787 ntTSL 515.71■□□□□ 0.13e-6■■□□□ 13
U2AF2P26368 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.053e-6■■□□□ 13
U2AF2P26368 CLK3-214ENST00000564096 805 ntTSL 214.7□□□□□ -0.063e-6■■□□□ 13
U2AF2P26368 CLK3-224ENST00000568605 1047 ntTSL 214.62□□□□□ -0.073e-6■■□□□ 13
U2AF2P26368 CLK3-226ENST00000569406 3591 ntTSL 213.37□□□□□ -0.273e-6■■□□□ 13
U2AF2P26368 TOP3A-217ENST00000584582 3661 ntTSL 512.83□□□□□ -0.363e-6■■□□□ 13
U2AF2P26368 TOP3A-214ENST00000582981 3239 ntTSL 212.73□□□□□ -0.373e-6■■□□□ 13
U2AF2P26368 TOP3A-216ENST00000583804 1465 ntTSL 512.47□□□□□ -0.413e-6■■□□□ 13
U2AF2P26368 TOP3A-201ENST00000321105 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.433e-6■■□□□ 13
U2AF2P26368 TOP3A-209ENST00000580095 2929 ntTSL 1 (best)12.09□□□□□ -0.473e-6■■□□□ 13
U2AF2P26368 TOP3A-208ENST00000542570 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.613e-6■■□□□ 13
U2AF2P26368 TOP3A-203ENST00000469739 3196 ntTSL 210.82□□□□□ -0.683e-6■■□□□ 13
U2AF2P26368 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.975e-61■■□□□ 13
U2AF2P26368 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.195e-61■■□□□ 13
U2AF2P26368 AJUBA-206ENST00000553911 567 ntTSL 510.77□□□□□ -0.695e-61■■□□□ 13
U2AF2P26368 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC10.74□□□□□ -0.695e-61■■□□□ 13
U2AF2P26368 AJUBA-204ENST00000553592 418 ntTSL 58.04□□□□□ -1.125e-61■■□□□ 13
U2AF2P26368 AJUBA-208ENST00000556731 651 ntTSL 48.04□□□□□ -1.125e-61■■□□□ 13
U2AF2P26368 SEC31A-232ENST00000511338 657 ntTSL 53.53□□□□□ -1.843e-7■■□□□ 13
U2AF2P26368 RBM39-237ENST00000492779 2316 ntTSL 27.77□□□□□ -1.171e-8■■□□□ 13
U2AF2P26368 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC10.33□□□□□ -0.762e-6■■□□□ 13
U2AF2P26368 INTS6-210ENST00000483441 2969 ntTSL 21.74□□□□□ -2.132e-6■■□□□ 13
U2AF2P26368 NCBP3-207ENST00000577169 645 ntTSL 1 (best)17.71■□□□□ 0.432e-6■■□□□ 13
U2AF2P26368 NCBP3-204ENST00000574911 2701 ntTSL 1 (best)10.36□□□□□ -0.752e-6■■□□□ 13
U2AF2P26368 NCBP3-205ENST00000575815 4096 ntTSL 29.36□□□□□ -0.912e-6■■□□□ 13
U2AF2P26368 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.952e-6■■□□□ 13
U2AF2P26368 FARP1-230ENST00000600380 510 ntTSL 313.48□□□□□ -0.251e-29■■□□□ 13
U2AF2P26368 GPRC5C-203ENST00000392628 1529 ntAPPRIS ALT2 TSL 524.48■■□□□ 1.514e-10■■□□□ 13
U2AF2P26368 GPRC5C-210ENST00000582473 584 ntTSL 323.01■■□□□ 1.274e-10■■□□□ 13
U2AF2P26368 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.274e-10■■□□□ 13
U2AF2P26368 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.97■■□□□ 1.114e-10■■□□□ 13
U2AF2P26368 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.68■□□□□ 0.584e-10■■□□□ 13
U2AF2P26368 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.344e-10■■□□□ 13
U2AF2P26368 GPRC5C-209ENST00000582444 550 ntTSL 411.61□□□□□ -0.554e-10■■□□□ 13
U2AF2P26368 UBE2V1-218ENST00000490289 628 ntTSL 310.62□□□□□ -0.715e-14■■□□□ 13
U2AF2P26368 UBE2V1-211ENST00000467839 566 ntTSL 27.4□□□□□ -1.225e-14■■□□□ 13
U2AF2P26368 UBE2V1-208ENST00000432266 569 ntTSL 46.85□□□□□ -1.315e-14■■□□□ 13
U2AF2P26368 UBE2V1-221ENST00000493090 563 ntTSL 45.8□□□□□ -1.485e-14■■□□□ 13
U2AF2P26368 UBE2V1-213ENST00000470565 728 ntTSL 34.45□□□□□ -1.75e-14■■□□□ 13
U2AF2P26368 UBE2V1-214ENST00000472923 421 ntTSL 53.07□□□□□ -1.925e-14■■□□□ 13
U2AF2P26368 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.073e-7■■□□□ 13
U2AF2P26368 ALDH18A1-201ENST00000371221 3337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.193e-7■■□□□ 13
U2AF2P26368 UACA-205ENST00000558758 2060 ntTSL 1 (best)7.64□□□□□ -1.195e-6■■□□□ 13
U2AF2P26368 UACA-212ENST00000560523 1183 ntTSL 56.37□□□□□ -1.395e-6■■□□□ 13
U2AF2P26368 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.435e-6■■□□□ 13
U2AF2P26368 UACA-210ENST00000560167 749 ntTSL 45.43□□□□□ -1.545e-6■■□□□ 13
U2AF2P26368 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.75e-6■■□□□ 13
U2AF2P26368 AACS-212ENST00000545511 6646 ntTSL 1 (best)16.34■□□□□ 0.211e-6■■□□□ 13
U2AF2P26368 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -01e-6■■□□□ 13
U2AF2P26368 AACS-210ENST00000539251 555 ntTSL 413.02□□□□□ -0.331e-6■■□□□ 13
U2AF2P26368 AACS-202ENST00000316543 3115 ntTSL 212.1□□□□□ -0.471e-6■■□□□ 13
U2AF2P26368 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.226e-7■■□□□ 13
U2AF2P26368 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.656e-7■■□□□ 13
U2AF2P26368 NCAPG2-205ENST00000441982 2926 ntTSL 210.79□□□□□ -0.686e-7■■□□□ 13
U2AF2P26368 NCAPG2-204ENST00000432615 4134 ntTSL 510.28□□□□□ -0.766e-7■■□□□ 13
U2AF2P26368 NCAPG2-206ENST00000467785 3276 ntTSL 1 (best)9.49□□□□□ -0.896e-7■■□□□ 13
U2AF2P26368 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.74□□□□□ -1.176e-7■■□□□ 13
U2AF2P26368 SUCLG1-206ENST00000487809 762 ntTSL 26.56□□□□□ -1.361e-6■■□□□ 13
U2AF2P26368 SSU72-203ENST00000378725 619 ntTSL 221.31■■□□□ 17e-8■■□□□ 13
Retrieved 100 of 36,523 protein–RNA pairs in 198.3 ms