RNA–Protein interactions for RNA: ENST00000466080.1

VDAC1-205, Transcript of voltage dependent anion channel 1, humanhuman

TSL 3

Gene VDAC1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-205ENST00000466080 AEBP2Q6ZN18 517 aaPredicted RBP17.64■□□□□ 0.41
VDAC1-205ENST00000466080 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
VDAC1-205ENST00000466080 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
VDAC1-205ENST00000466080 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
VDAC1-205ENST00000466080 PHF23Q9BUL5 403 aaPredicted RBP14.79□□□□□ -0.04
VDAC1-205ENST00000466080 FOXD1Q16676 465 aa14□□□□□ -0.17
VDAC1-205ENST00000466080 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
VDAC1-205ENST00000466080 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
VDAC1-205ENST00000466080 ABCC9O60706 1549 aa13.22□□□□□ -0.29
VDAC1-205ENST00000466080 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
VDAC1-205ENST00000466080 ADRA2BP18089 450 aa13.04□□□□□ -0.32
VDAC1-205ENST00000466080 MSH5O43196 834 aa13.03□□□□□ -0.32
VDAC1-205ENST00000466080 PIAS4Q8N2W9 510 aaPredicted RBP13.03□□□□□ -0.32
VDAC1-205ENST00000466080 ZCCHC6Q5VYS8 1495 aaKnown RBP12.99□□□□□ -0.33
VDAC1-205ENST00000466080 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
VDAC1-205ENST00000466080 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
VDAC1-205ENST00000466080 MYO15BQ96JP2 1530 aa12.61□□□□□ -0.39
VDAC1-205ENST00000466080 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
VDAC1-205ENST00000466080 DNAJC5BQ9UF47 199 aa12.55□□□□□ -0.4
VDAC1-205ENST00000466080 SHROOM4Q9ULL8 1493 aa12.54□□□□□ -0.4
VDAC1-205ENST00000466080 NACADO15069 1562 aa12.48□□□□□ -0.41
VDAC1-205ENST00000466080 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
VDAC1-205ENST00000466080 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.42
VDAC1-205ENST00000466080 SCRIBQ14160 1630 aa12.33□□□□□ -0.44
VDAC1-205ENST00000466080 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
VDAC1-205ENST00000466080 BICRAQ9NZM4 1560 aa12.25□□□□□ -0.45
VDAC1-205ENST00000466080 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
VDAC1-205ENST00000466080 MAPK8IP2Q13387 824 aaPredicted RBP12□□□□□ -0.49
VDAC1-205ENST00000466080 RSF1Q96T23 1441 aaPredicted RBP11.97□□□□□ -0.49
VDAC1-205ENST00000466080 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
VDAC1-205ENST00000466080 CC2D2AQ9P2K1 1620 aa11.95□□□□□ -0.5
VDAC1-205ENST00000466080 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
VDAC1-205ENST00000466080 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
VDAC1-205ENST00000466080 DMRT2Q9Y5R5 561 aa11.88□□□□□ -0.51
VDAC1-205ENST00000466080 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
VDAC1-205ENST00000466080 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
VDAC1-205ENST00000466080 WIZO95785 1651 aa11.81□□□□□ -0.52
VDAC1-205ENST00000466080 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
VDAC1-205ENST00000466080 PEG3Q9GZU2 1588 aa11.72□□□□□ -0.53
VDAC1-205ENST00000466080 TOP2AP11388 1531 aaKnown RBP11.71□□□□□ -0.53
VDAC1-205ENST00000466080 PPP4R3CPQ6ZMV5 832 aa11.64□□□□□ -0.55
VDAC1-205ENST00000466080 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
VDAC1-205ENST00000466080 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
VDAC1-205ENST00000466080 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
VDAC1-205ENST00000466080 BAZ1BQ9UIG0 1483 aaKnown RBP11.55□□□□□ -0.56
VDAC1-205ENST00000466080 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
VDAC1-205ENST00000466080 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
VDAC1-205ENST00000466080 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
VDAC1-205ENST00000466080 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
VDAC1-205ENST00000466080 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
VDAC1-205ENST00000466080 NESP48681 1621 aa11.38□□□□□ -0.59
VDAC1-205ENST00000466080 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
VDAC1-205ENST00000466080 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
VDAC1-205ENST00000466080 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
VDAC1-205ENST00000466080 CUX2O14529 1486 aa11.32□□□□□ -0.6
VDAC1-205ENST00000466080 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
VDAC1-205ENST00000466080 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
VDAC1-205ENST00000466080 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
VDAC1-205ENST00000466080 CFTRP13569 1480 aa11.27□□□□□ -0.6
VDAC1-205ENST00000466080 KIF21AQ7Z4S6 1674 aa11.27□□□□□ -0.61
VDAC1-205ENST00000466080 PRDM2Q13029 1718 aa11.26□□□□□ -0.61
VDAC1-205ENST00000466080 WRNQ14191 1432 aaPredicted RBP eCLIP11.26□□□□□ -0.61
VDAC1-205ENST00000466080 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
VDAC1-205ENST00000466080 CACNB1Q02641 598 aaPredicted RBP11.21□□□□□ -0.61
VDAC1-205ENST00000466080 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
VDAC1-205ENST00000466080 TOP2BQ02880 1626 aa11.19□□□□□ -0.62
VDAC1-205ENST00000466080 BIVM-ERCC5R4GMW8 1640 aa11.19□□□□□ -0.62
VDAC1-205ENST00000466080 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
VDAC1-205ENST00000466080 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
VDAC1-205ENST00000466080 LOC105371045A0A1W2PR82 267 aa11.16□□□□□ -0.62
VDAC1-205ENST00000466080 EEA1Q15075 1411 aa11.15□□□□□ -0.62
VDAC1-205ENST00000466080 CUX1P39880 1505 aa11.14□□□□□ -0.63
VDAC1-205ENST00000466080 FAM9AQ8IZU1 332 aaPredicted RBP11.13□□□□□ -0.63
VDAC1-205ENST00000466080 SOGA1O94964 1423 aa11.12□□□□□ -0.63
VDAC1-205ENST00000466080 NCBP3Q53F19 620 aaKnown RBP11.11□□□□□ -0.63
VDAC1-205ENST00000466080 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
VDAC1-205ENST00000466080 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
VDAC1-205ENST00000466080 NPM3O75607 178 aaKnown RBP11.05□□□□□ -0.64
VDAC1-205ENST00000466080 WDR62O43379 1518 aa11.04□□□□□ -0.64
VDAC1-205ENST00000466080 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
VDAC1-205ENST00000466080 DNMBPQ6XZF7 1577 aa11.03□□□□□ -0.64
VDAC1-205ENST00000466080 KIF21BO75037 1637 aa11.02□□□□□ -0.64
VDAC1-205ENST00000466080 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
VDAC1-205ENST00000466080 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
VDAC1-205ENST00000466080 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
VDAC1-205ENST00000466080 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
VDAC1-205ENST00000466080 GOLGA3Q08378 1498 aa10.99□□□□□ -0.65
VDAC1-205ENST00000466080 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
VDAC1-205ENST00000466080 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.65
VDAC1-205ENST00000466080 KIF27Q86VH2 1401 aa10.96□□□□□ -0.65
VDAC1-205ENST00000466080 TNIKQ9UKE5 1360 aa10.96□□□□□ -0.65
VDAC1-205ENST00000466080 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
VDAC1-205ENST00000466080 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
VDAC1-205ENST00000466080 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
VDAC1-205ENST00000466080 POLA1P09884 1462 aaPredicted RBP10.93□□□□□ -0.66
VDAC1-205ENST00000466080 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
VDAC1-205ENST00000466080 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
VDAC1-205ENST00000466080 RAPGEF2Q9Y4G8 1499 aa10.91□□□□□ -0.66
VDAC1-205ENST00000466080 CEP162Q5TB80 1403 aa10.91□□□□□ -0.66
VDAC1-205ENST00000466080 WDR97A6NE52 1622 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms