RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 NISCHQ9Y2I1 1504 aa45.49■■■■■ 4.87
UBXN1-216ENST00000533908 ABCC9O60706 1549 aa40.98■■■■■ 4.15
UBXN1-216ENST00000533908 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
UBXN1-216ENST00000533908 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
UBXN1-216ENST00000533908 DNAJC5BQ9UF47 199 aa38.68■■■■□ 3.78
UBXN1-216ENST00000533908 NACADO15069 1562 aa38.59■■■■□ 3.77
UBXN1-216ENST00000533908 DCAF8L2P0C7V8 631 aa38.51■■■■□ 3.76
UBXN1-216ENST00000533908 PABPN1Q86U42 306 aaKnown RBP eCLIP38.21■■■■□ 3.71
UBXN1-216ENST00000533908 UNC13AQ9UPW8 1703 aa38.03■■■■□ 3.68
UBXN1-216ENST00000533908 MYO15BQ96JP2 1530 aa38.02■■■■□ 3.68
UBXN1-216ENST00000533908 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
UBXN1-216ENST00000533908 ZCCHC6Q5VYS8 1495 aaKnown RBP37.65■■■■□ 3.62
UBXN1-216ENST00000533908 DCAF1Q9Y4B6 1507 aa37.51■■■■□ 3.6
UBXN1-216ENST00000533908 SCRIBQ14160 1630 aa37.2■■■■□ 3.55
UBXN1-216ENST00000533908 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
UBXN1-216ENST00000533908 CC2D2AQ9P2K1 1620 aa36.98■■■■□ 3.51
UBXN1-216ENST00000533908 CECR2Q9BXF3 1484 aa36.88■■■■□ 3.5
UBXN1-216ENST00000533908 EIF4G1Q04637 1599 aaKnown RBP36.87■■■■□ 3.49
UBXN1-216ENST00000533908 NCAPD3P42695 1498 aa35.7■■■■□ 3.31
UBXN1-216ENST00000533908 ATAD2BQ9ULI0 1458 aa35.58■■■■□ 3.29
UBXN1-216ENST00000533908 DNAJC5Q9H3Z4 198 aa35.49■■■■□ 3.27
UBXN1-216ENST00000533908 SMARCA4P51532 1647 aa35.47■■■■□ 3.27
UBXN1-216ENST00000533908 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
UBXN1-216ENST00000533908 HMGXB3Q12766 1538 aa35.34■■■■□ 3.25
UBXN1-216ENST00000533908 ERCC6Q03468 1493 aa35.29■■■■□ 3.24
UBXN1-216ENST00000533908 CUX2O14529 1486 aa35.26■■■■□ 3.23
UBXN1-216ENST00000533908 BAZ1AQ9NRL2 1556 aaPredicted RBP35.25■■■■□ 3.23
UBXN1-216ENST00000533908 NESP48681 1621 aa35.21■■■■□ 3.23
UBXN1-216ENST00000533908 BAZ1BQ9UIG0 1483 aaKnown RBP35.17■■■■□ 3.22
UBXN1-216ENST00000533908 PEG3Q9GZU2 1588 aa35.12■■■■□ 3.21
UBXN1-216ENST00000533908 MROH2BQ7Z745 1585 aa35.09■■■■□ 3.21
UBXN1-216ENST00000533908 LAMC3Q9Y6N6 1575 aa34.83■■■■□ 3.17
UBXN1-216ENST00000533908 THOC2Q8NI27 1593 aaKnown RBP34.78■■■■□ 3.16
UBXN1-216ENST00000533908 KIF21AQ7Z4S6 1674 aa34.66■■■■□ 3.14
UBXN1-216ENST00000533908 PDS5BQ9NTI5 1447 aa34.64■■■■□ 3.14
UBXN1-216ENST00000533908 WIZO95785 1651 aa34.64■■■■□ 3.14
UBXN1-216ENST00000533908 CADPSQ9ULU8 1353 aa34.61■■■■□ 3.13
UBXN1-216ENST00000533908 MRC2Q9UBG0 1479 aa34.36■■■■□ 3.09
UBXN1-216ENST00000533908 RSF1Q96T23 1441 aaPredicted RBP34.34■■■■□ 3.09
UBXN1-216ENST00000533908 WDR62O43379 1518 aa34.28■■■■□ 3.08
UBXN1-216ENST00000533908 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.06
UBXN1-216ENST00000533908 FANCD2Q9BXW9 1451 aa34.19■■■■□ 3.06
UBXN1-216ENST00000533908 CFTRP13569 1480 aa34.18■■■■□ 3.06
UBXN1-216ENST00000533908 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
UBXN1-216ENST00000533908 URB2Q14146 1524 aaKnown RBP33.95■■■■□ 3.03
UBXN1-216ENST00000533908 TRIM41Q8WV44 630 aa33.87■■■■□ 3.01
UBXN1-216ENST00000533908 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
UBXN1-216ENST00000533908 OSCARQ8IYS5 282 aa33.72■■■□□ 2.99
UBXN1-216ENST00000533908 PRDM2Q13029 1718 aa33.7■■■□□ 2.99
UBXN1-216ENST00000533908 ZNF608Q9ULD9 1512 aaPredicted RBP33.57■■■□□ 2.96
UBXN1-216ENST00000533908 TOPBP1Q92547 1522 aa33.54■■■□□ 2.96
UBXN1-216ENST00000533908 IFT140Q96RY7 1462 aa33.52■■■□□ 2.96
UBXN1-216ENST00000533908 ABCC8Q09428 1581 aa33.39■■■□□ 2.94
UBXN1-216ENST00000533908 DNMBPQ6XZF7 1577 aa33.36■■■□□ 2.93
UBXN1-216ENST00000533908 EIF4G3O43432 1585 aaKnown RBP33.28■■■□□ 2.92
UBXN1-216ENST00000533908 AQRO60306 1485 aaKnown RBP eCLIP33.26■■■□□ 2.924e-9■■■■■ 30.4
UBXN1-216ENST00000533908 TARBP1Q13395 1621 aaKnown RBP33.26■■■□□ 2.91
UBXN1-216ENST00000533908 RIMBP3CA6NJZ7 1639 aa33.25■■■□□ 2.91
UBXN1-216ENST00000533908 RIMBP3BA6NNM3 1639 aa33.25■■■□□ 2.91
UBXN1-216ENST00000533908 RIMBP3Q9UFD9 1639 aa33.25■■■□□ 2.91
UBXN1-216ENST00000533908 POLA1P09884 1462 aaPredicted RBP33.19■■■□□ 2.9
UBXN1-216ENST00000533908 ARHGEF11O15085 1522 aa33.15■■■□□ 2.9
UBXN1-216ENST00000533908 RAD54L2Q9Y4B4 1467 aa33.13■■■□□ 2.89
UBXN1-216ENST00000533908 CHD1O14646 1710 aa33.06■■■□□ 2.88
UBXN1-216ENST00000533908 SOGA1O94964 1423 aa33.06■■■□□ 2.88
UBXN1-216ENST00000533908 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
UBXN1-216ENST00000533908 FBLN2P98095 1184 aa33.03■■■□□ 2.88
UBXN1-216ENST00000533908 CYB5RLQ6IPT4 315 aa32.99■■■□□ 2.87
UBXN1-216ENST00000533908 FGD5Q6ZNL6 1462 aa32.97■■■□□ 2.87
UBXN1-216ENST00000533908 CUX1P39880 1505 aa32.96■■■□□ 2.87
UBXN1-216ENST00000533908 SNAPC4Q5SXM2 1469 aa32.85■■■□□ 2.85
UBXN1-216ENST00000533908 ARAP1Q96P48 1450 aa32.84■■■□□ 2.85
UBXN1-216ENST00000533908 WDR97A6NE52 1622 aa32.78■■■□□ 2.84
UBXN1-216ENST00000533908 SUPT5HO00267 1087 aaKnown RBP32.78■■■□□ 2.84
UBXN1-216ENST00000533908 CHMP7Q8WUX9 453 aaPredicted RBP32.75■■■□□ 2.83
UBXN1-216ENST00000533908 GRIN2BQ13224 1484 aa32.74■■■□□ 2.83
UBXN1-216ENST00000533908 MAGI1Q96QZ7 1491 aaPredicted RBP32.72■■■□□ 2.83
UBXN1-216ENST00000533908 CLASP1Q7Z460 1538 aa32.71■■■□□ 2.83
UBXN1-216ENST00000533908 SYNJ2O15056 1496 aa32.64■■■□□ 2.82
UBXN1-216ENST00000533908 GAPVD1Q14C86 1478 aa32.63■■■□□ 2.81
UBXN1-216ENST00000533908 SYNJ1O43426 1573 aa32.61■■■□□ 2.81
UBXN1-216ENST00000533908 TRHP20396 242 aaPredicted RBP32.6■■■□□ 2.81
UBXN1-216ENST00000533908 ABCA10Q8WWZ4 1543 aa32.57■■■□□ 2.8
UBXN1-216ENST00000533908 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
UBXN1-216ENST00000533908 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.8
UBXN1-216ENST00000533908 WRNQ14191 1432 aaPredicted RBP eCLIP32.43■■■□□ 2.78
UBXN1-216ENST00000533908 TOP2BQ02880 1626 aa32.34■■■□□ 2.77
UBXN1-216ENST00000533908 BIVM-ERCC5R4GMW8 1640 aa32.33■■■□□ 2.77
UBXN1-216ENST00000533908 GRIN2AQ12879 1464 aa32.33■■■□□ 2.77
UBXN1-216ENST00000533908 ADAMTS12P58397 1594 aa32.27■■■□□ 2.76
UBXN1-216ENST00000533908 ERCC6L2Q5T890 1561 aa32.27■■■□□ 2.76
UBXN1-216ENST00000533908 NUP160Q12769 1436 aa32.24■■■□□ 2.75
UBXN1-216ENST00000533908 CEP170Q5SW79 1584 aa32.24■■■□□ 2.75
UBXN1-216ENST00000533908 FHAD1B1AJZ9 1412 aa32.2■■■□□ 2.75
UBXN1-216ENST00000533908 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
UBXN1-216ENST00000533908 SHROOM2Q13796 1616 aa32.08■■■□□ 2.73
UBXN1-216ENST00000533908 JPH4Q96JJ6 628 aa31.96■■■□□ 2.71
UBXN1-216ENST00000533908 PRG4Q92954 1404 aaPredicted RBP31.95■■■□□ 2.71
UBXN1-216ENST00000533908 IGF1RP08069 1367 aa31.82■■■□□ 2.69
UBXN1-216ENST00000533908 RUSC2Q8N2Y8 1516 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms