RNA–Protein interactions for RNA: ENST00000310053.9

HLTF-201, Transcript of helicase like transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HLTF, Length 5,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLTF-201ENST00000310053 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
HLTF-201ENST00000310053 SUPT5HO00267 1087 aaKnown RBP14.1□□□□□ -0.15
HLTF-201ENST00000310053 EHMT2Q96KQ7 1210 aa13.77□□□□□ -0.2
HLTF-201ENST00000310053 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
HLTF-201ENST00000310053 NISCHQ9Y2I1 1504 aa13.48□□□□□ -0.25
HLTF-201ENST00000310053 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
HLTF-201ENST00000310053 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
HLTF-201ENST00000310053 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
HLTF-201ENST00000310053 TTBK1Q5TCY1 1321 aaPredicted RBP13.32□□□□□ -0.28
HLTF-201ENST00000310053 APLP2Q06481 763 aa13.28□□□□□ -0.28
HLTF-201ENST00000310053 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
HLTF-201ENST00000310053 CENPBP07199 599 aaPredicted RBP13.04□□□□□ -0.32
HLTF-201ENST00000310053 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.32
HLTF-201ENST00000310053 ERICH6Q7L0X2 663 aa12.94□□□□□ -0.34
HLTF-201ENST00000310053 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
HLTF-201ENST00000310053 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
HLTF-201ENST00000310053 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.34
HLTF-201ENST00000310053 ATP1B4Q9UN42 357 aaPredicted RBP12.85□□□□□ -0.35
HLTF-201ENST00000310053 PPARGC1BQ86YN6 1023 aaKnown RBP12.84□□□□□ -0.35
HLTF-201ENST00000310053 UBTFP17480 764 aaKnown RBP12.82□□□□□ -0.36
HLTF-201ENST00000310053 NEFLP07196 543 aa12.73□□□□□ -0.37
HLTF-201ENST00000310053 HRCP23327 699 aa12.62□□□□□ -0.39
HLTF-201ENST00000310053 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
HLTF-201ENST00000310053 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
HLTF-201ENST00000310053 MYT1Q01538 1121 aa12.57□□□□□ -0.4
HLTF-201ENST00000310053 ITGAEP38570 1179 aa12.53□□□□□ -0.4
HLTF-201ENST00000310053 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
HLTF-201ENST00000310053 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
HLTF-201ENST00000310053 POLR3GLQ9BT43 218 aa12.45□□□□□ -0.42
HLTF-201ENST00000310053 CHIC1Q5VXU3 224 aa12.44□□□□□ -0.42
HLTF-201ENST00000310053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
HLTF-201ENST00000310053 DAXXQ9UER7 740 aaPredicted RBP12.35□□□□□ -0.43
HLTF-201ENST00000310053 DIEXFQ68CQ4 756 aaKnown RBP12.3□□□□□ -0.44
HLTF-201ENST00000310053 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
HLTF-201ENST00000310053 BCANQ96GW7 911 aa12.17□□□□□ -0.46
HLTF-201ENST00000310053 GTF3C3Q9Y5Q9 886 aa12.16□□□□□ -0.46
HLTF-201ENST00000310053 RTL5Q5HYW3 569 aaPredicted RBP12.14□□□□□ -0.47
HLTF-201ENST00000310053 CLSPNQ9HAW4 1339 aa12.12□□□□□ -0.47
HLTF-201ENST00000310053 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
HLTF-201ENST00000310053 FAM50AQ14320 339 aaKnown RBP12.09□□□□□ -0.47
HLTF-201ENST00000310053 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
HLTF-201ENST00000310053 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
HLTF-201ENST00000310053 TRIM52Q96A61 297 aa12.02□□□□□ -0.48
HLTF-201ENST00000310053 ZNF326Q5BKZ1 582 aaKnown RBP11.97□□□□□ -0.49
HLTF-201ENST00000310053 ANP32CO43423 234 aa11.95□□□□□ -0.5
HLTF-201ENST00000310053 CDK11AQ9UQ88 783 aaPredicted RBP11.93□□□□□ -0.5
HLTF-201ENST00000310053 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
HLTF-201ENST00000310053 BCL11AQ9H165 835 aa11.88□□□□□ -0.51
HLTF-201ENST00000310053 PABPN1Q86U42 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
HLTF-201ENST00000310053 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
HLTF-201ENST00000310053 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
HLTF-201ENST00000310053 NPM2Q86SE8 214 aaKnown RBP11.76□□□□□ -0.53
HLTF-201ENST00000310053 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
HLTF-201ENST00000310053 CANXP27824 592 aaKnown RBP11.75□□□□□ -0.53
HLTF-201ENST00000310053 FKBP8Q14318 412 aa11.75□□□□□ -0.53
HLTF-201ENST00000310053 FBLN2P98095 1184 aa11.73□□□□□ -0.53
HLTF-201ENST00000310053 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
HLTF-201ENST00000310053 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
HLTF-201ENST00000310053 SLC24A1O60721 1099 aa11.71□□□□□ -0.53
HLTF-201ENST00000310053 EIF5BO60841 1220 aaKnown RBP11.68□□□□□ -0.54
HLTF-201ENST00000310053 DDX10Q13206 875 aaKnown RBP11.68□□□□□ -0.54
HLTF-201ENST00000310053 ABCC9O60706 1549 aa11.68□□□□□ -0.54
HLTF-201ENST00000310053 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
HLTF-201ENST00000310053 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
HLTF-201ENST00000310053 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
HLTF-201ENST00000310053 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
HLTF-201ENST00000310053 NEFMP07197 916 aa11.61□□□□□ -0.55
HLTF-201ENST00000310053 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
HLTF-201ENST00000310053 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
HLTF-201ENST00000310053 NBR1Q14596 966 aa11.57□□□□□ -0.56
HLTF-201ENST00000310053 MIER1Q8N108 512 aa11.55□□□□□ -0.56
HLTF-201ENST00000310053 IRX6P78412 446 aaPredicted RBP11.55□□□□□ -0.56
HLTF-201ENST00000310053 HIRIP3Q9BW71 556 aaPredicted RBP11.55□□□□□ -0.56
HLTF-201ENST00000310053 HSP90AA1P07900 732 aaKnown RBP11.54□□□□□ -0.56
HLTF-201ENST00000310053 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
HLTF-201ENST00000310053 ARXQ96QS3 562 aa11.52□□□□□ -0.57
HLTF-201ENST00000310053 CHIC2Q9UKJ5 165 aa11.51□□□□□ -0.57
HLTF-201ENST00000310053 TMC1Q8TDI8 760 aa11.5□□□□□ -0.57
HLTF-201ENST00000310053 CHGAP10645 457 aaKnown RBP11.5□□□□□ -0.57
HLTF-201ENST00000310053 ANP32BQ92688 251 aaKnown RBP11.48□□□□□ -0.57
HLTF-201ENST00000310053 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
HLTF-201ENST00000310053 UPF2Q9HAU5 1272 aaKnown RBP11.48□□□□□ -0.57
HLTF-201ENST00000310053 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
HLTF-201ENST00000310053 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
HLTF-201ENST00000310053 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
HLTF-201ENST00000310053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.41□□□□□ -0.582e-7■■□□□ 13.6
HLTF-201ENST00000310053 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.58
HLTF-201ENST00000310053 STAG3Q9UJ98 1225 aa11.37□□□□□ -0.59
HLTF-201ENST00000310053 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
HLTF-201ENST00000310053 WDR43Q15061 677 aaKnown RBP eCLIP11.36□□□□□ -0.59
HLTF-201ENST00000310053 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.59
HLTF-201ENST00000310053 EIF4G2P78344 907 aaKnown RBP eCLIP11.32□□□□□ -0.6
HLTF-201ENST00000310053 GLIPR1L2Q4G1C9 344 aa11.32□□□□□ -0.6
HLTF-201ENST00000310053 SENP3Q9H4L4 574 aaPredicted RBP11.31□□□□□ -0.6
HLTF-201ENST00000310053 RRP7BPQ9NSQ0 103 aa11.31□□□□□ -0.6
HLTF-201ENST00000310053 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
HLTF-201ENST00000310053 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
HLTF-201ENST00000310053 SUPT16HQ9Y5B9 1047 aaKnown RBP11.3□□□□□ -0.6
HLTF-201ENST00000310053 MTUS2Q5JR59 1369 aa11.29□□□□□ -0.6
HLTF-201ENST00000310053 SCRIBQ14160 1630 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms