RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 NISCHQ9Y2I1 1504 aa34.48■■■■□ 3.11
UBXN1-209ENST00000528907 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
UBXN1-209ENST00000528907 ABCC9O60706 1549 aa29.46■■■□□ 2.31
UBXN1-209ENST00000528907 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
UBXN1-209ENST00000528907 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
UBXN1-209ENST00000528907 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
UBXN1-209ENST00000528907 NACADO15069 1562 aa28.62■■■□□ 2.17
UBXN1-209ENST00000528907 RB1CC1Q8TDY2 1594 aa28.53■■■□□ 2.16
UBXN1-209ENST00000528907 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
UBXN1-209ENST00000528907 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
UBXN1-209ENST00000528907 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
UBXN1-209ENST00000528907 SCRIBQ14160 1630 aa27.76■■■□□ 2.03
UBXN1-209ENST00000528907 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
UBXN1-209ENST00000528907 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
UBXN1-209ENST00000528907 PABPN1Q86U42 306 aaKnown RBP eCLIP27.42■■□□□ 1.98
UBXN1-209ENST00000528907 EIF4G1Q04637 1599 aaKnown RBP26.87■■□□□ 1.89
UBXN1-209ENST00000528907 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
UBXN1-209ENST00000528907 BAZ1AQ9NRL2 1556 aaPredicted RBP26.71■■□□□ 1.87
UBXN1-209ENST00000528907 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
UBXN1-209ENST00000528907 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
UBXN1-209ENST00000528907 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
UBXN1-209ENST00000528907 PEG3Q9GZU2 1588 aa26.49■■□□□ 1.83
UBXN1-209ENST00000528907 SMARCA2P51531 1590 aa26.43■■□□□ 1.82
UBXN1-209ENST00000528907 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
UBXN1-209ENST00000528907 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
UBXN1-209ENST00000528907 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
UBXN1-209ENST00000528907 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
UBXN1-209ENST00000528907 HMGXB3Q12766 1538 aa26.31■■□□□ 1.8
UBXN1-209ENST00000528907 WIZO95785 1651 aa26.28■■□□□ 1.8
UBXN1-209ENST00000528907 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
UBXN1-209ENST00000528907 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
UBXN1-209ENST00000528907 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
UBXN1-209ENST00000528907 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
UBXN1-209ENST00000528907 CUX2O14529 1486 aa25.67■■□□□ 1.7
UBXN1-209ENST00000528907 LAMC3Q9Y6N6 1575 aa25.64■■□□□ 1.69
UBXN1-209ENST00000528907 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
UBXN1-209ENST00000528907 CFTRP13569 1480 aa25.54■■□□□ 1.68
UBXN1-209ENST00000528907 NESP48681 1621 aa25.52■■□□□ 1.68
UBXN1-209ENST00000528907 ERCC6Q03468 1493 aa25.5■■□□□ 1.67
UBXN1-209ENST00000528907 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
UBXN1-209ENST00000528907 PDS5BQ9NTI5 1447 aa25.39■■□□□ 1.66
UBXN1-209ENST00000528907 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
UBXN1-209ENST00000528907 FANCD2Q9BXW9 1451 aa25.28■■□□□ 1.64
UBXN1-209ENST00000528907 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
UBXN1-209ENST00000528907 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
UBXN1-209ENST00000528907 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
UBXN1-209ENST00000528907 WDR62O43379 1518 aa25.06■■□□□ 1.6
UBXN1-209ENST00000528907 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
UBXN1-209ENST00000528907 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
UBXN1-209ENST00000528907 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
UBXN1-209ENST00000528907 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
UBXN1-209ENST00000528907 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
UBXN1-209ENST00000528907 CUX1P39880 1505 aa24.87■■□□□ 1.57
UBXN1-209ENST00000528907 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
UBXN1-209ENST00000528907 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
UBXN1-209ENST00000528907 TOP2BQ02880 1626 aa24.81■■□□□ 1.56
UBXN1-209ENST00000528907 SYNJ1O43426 1573 aa24.77■■□□□ 1.56
UBXN1-209ENST00000528907 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
UBXN1-209ENST00000528907 FGD5Q6ZNL6 1462 aa24.72■■□□□ 1.55
UBXN1-209ENST00000528907 IFT140Q96RY7 1462 aa24.7■■□□□ 1.54
UBXN1-209ENST00000528907 TARBP1Q13395 1621 aaKnown RBP24.67■■□□□ 1.54
UBXN1-209ENST00000528907 SOGA1O94964 1423 aa24.62■■□□□ 1.53
UBXN1-209ENST00000528907 WDR97A6NE52 1622 aa24.59■■□□□ 1.53
UBXN1-209ENST00000528907 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.52
UBXN1-209ENST00000528907 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
UBXN1-209ENST00000528907 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
UBXN1-209ENST00000528907 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
UBXN1-209ENST00000528907 ABCA5Q8WWZ7 1642 aa24.44■■□□□ 1.5
UBXN1-209ENST00000528907 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
UBXN1-209ENST00000528907 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
UBXN1-209ENST00000528907 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
UBXN1-209ENST00000528907 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.494e-9■■■■■ 30.4
UBXN1-209ENST00000528907 GAPVD1Q14C86 1478 aa24.36■■□□□ 1.49
UBXN1-209ENST00000528907 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
UBXN1-209ENST00000528907 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
UBXN1-209ENST00000528907 KIF27Q86VH2 1401 aa24.31■■□□□ 1.48
UBXN1-209ENST00000528907 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
UBXN1-209ENST00000528907 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
UBXN1-209ENST00000528907 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
UBXN1-209ENST00000528907 EEA1Q15075 1411 aa24.16■■□□□ 1.46
UBXN1-209ENST00000528907 IGF1RP08069 1367 aa24.16■■□□□ 1.46
UBXN1-209ENST00000528907 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
UBXN1-209ENST00000528907 ADAMTS12P58397 1594 aa24.15■■□□□ 1.46
UBXN1-209ENST00000528907 CUL7Q14999 1698 aa24.15■■□□□ 1.46
UBXN1-209ENST00000528907 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
UBXN1-209ENST00000528907 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
UBXN1-209ENST00000528907 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
UBXN1-209ENST00000528907 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
UBXN1-209ENST00000528907 FHAD1B1AJZ9 1412 aa24.11■■□□□ 1.45
UBXN1-209ENST00000528907 CHD1O14646 1710 aa24.08■■□□□ 1.45
UBXN1-209ENST00000528907 GRIN2AQ12879 1464 aa24■■□□□ 1.43
UBXN1-209ENST00000528907 ARHGEF11O15085 1522 aa24■■□□□ 1.43
UBXN1-209ENST00000528907 CARMIL1Q5VZK9 1371 aa24■■□□□ 1.43
UBXN1-209ENST00000528907 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
UBXN1-209ENST00000528907 CSRNP3Q8WYN3 585 aa23.97■■□□□ 1.43
UBXN1-209ENST00000528907 PRXQ9BXM0 1461 aa23.97■■□□□ 1.43
UBXN1-209ENST00000528907 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
UBXN1-209ENST00000528907 FBLN2P98095 1184 aa23.92■■□□□ 1.42
UBXN1-209ENST00000528907 NUP160Q12769 1436 aa23.91■■□□□ 1.42
UBXN1-209ENST00000528907 KIF21BO75037 1637 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms