RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
SNRNP27-201ENST00000244227 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
SNRNP27-201ENST00000244227 ZCCHC6Q5VYS8 1495 aaKnown RBP25.99■■□□□ 1.75
SNRNP27-201ENST00000244227 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
SNRNP27-201ENST00000244227 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
SNRNP27-201ENST00000244227 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
SNRNP27-201ENST00000244227 ABCC9O60706 1549 aa25.26■■□□□ 1.63
SNRNP27-201ENST00000244227 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
SNRNP27-201ENST00000244227 NACADO15069 1562 aa24.94■■□□□ 1.58
SNRNP27-201ENST00000244227 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
SNRNP27-201ENST00000244227 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
SNRNP27-201ENST00000244227 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
SNRNP27-201ENST00000244227 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.47
SNRNP27-201ENST00000244227 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
SNRNP27-201ENST00000244227 CECR2Q9BXF3 1484 aa24.05■■□□□ 1.44
SNRNP27-201ENST00000244227 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
SNRNP27-201ENST00000244227 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
SNRNP27-201ENST00000244227 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.42
SNRNP27-201ENST00000244227 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
SNRNP27-201ENST00000244227 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
SNRNP27-201ENST00000244227 WIZO95785 1651 aa23.7■■□□□ 1.38
SNRNP27-201ENST00000244227 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
SNRNP27-201ENST00000244227 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
SNRNP27-201ENST00000244227 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
SNRNP27-201ENST00000244227 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
SNRNP27-201ENST00000244227 SMARCA2P51531 1590 aa23.24■■□□□ 1.31
SNRNP27-201ENST00000244227 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
SNRNP27-201ENST00000244227 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
SNRNP27-201ENST00000244227 BAZ1BQ9UIG0 1483 aaKnown RBP23.14■■□□□ 1.29
SNRNP27-201ENST00000244227 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
SNRNP27-201ENST00000244227 HMGXB3Q12766 1538 aa23■■□□□ 1.27
SNRNP27-201ENST00000244227 TRIM41Q8WV44 630 aa22.98■■□□□ 1.27
SNRNP27-201ENST00000244227 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
SNRNP27-201ENST00000244227 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
SNRNP27-201ENST00000244227 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
SNRNP27-201ENST00000244227 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.21
SNRNP27-201ENST00000244227 CFTRP13569 1480 aa22.6■■□□□ 1.21
SNRNP27-201ENST00000244227 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
SNRNP27-201ENST00000244227 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
SNRNP27-201ENST00000244227 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
SNRNP27-201ENST00000244227 SOGA1O94964 1423 aa22.44■■□□□ 1.18
SNRNP27-201ENST00000244227 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
SNRNP27-201ENST00000244227 TOP2BQ02880 1626 aa22.39■■□□□ 1.18
SNRNP27-201ENST00000244227 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
SNRNP27-201ENST00000244227 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
SNRNP27-201ENST00000244227 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
SNRNP27-201ENST00000244227 EEA1Q15075 1411 aa22.34■■□□□ 1.17
SNRNP27-201ENST00000244227 CUX1P39880 1505 aa22.33■■□□□ 1.17
SNRNP27-201ENST00000244227 EHMT2Q96KQ7 1210 aa22.27■■□□□ 1.16
SNRNP27-201ENST00000244227 CSRNP3Q8WYN3 585 aa22.27■■□□□ 1.15
SNRNP27-201ENST00000244227 NESP48681 1621 aa22.26■■□□□ 1.15
SNRNP27-201ENST00000244227 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
SNRNP27-201ENST00000244227 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
SNRNP27-201ENST00000244227 GOLGA3Q08378 1498 aa22.05■■□□□ 1.12
SNRNP27-201ENST00000244227 KIF21BO75037 1637 aa22.05■■□□□ 1.12
SNRNP27-201ENST00000244227 TNIKQ9UKE5 1360 aa22.05■■□□□ 1.12
SNRNP27-201ENST00000244227 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
SNRNP27-201ENST00000244227 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
SNRNP27-201ENST00000244227 DNMBPQ6XZF7 1577 aa22.03■■□□□ 1.12
SNRNP27-201ENST00000244227 PDS5BQ9NTI5 1447 aa22.03■■□□□ 1.12
SNRNP27-201ENST00000244227 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
SNRNP27-201ENST00000244227 KIF27Q86VH2 1401 aa22■■□□□ 1.11
SNRNP27-201ENST00000244227 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
SNRNP27-201ENST00000244227 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
SNRNP27-201ENST00000244227 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
SNRNP27-201ENST00000244227 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
SNRNP27-201ENST00000244227 CEP162Q5TB80 1403 aa21.94■■□□□ 1.1
SNRNP27-201ENST00000244227 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
SNRNP27-201ENST00000244227 CUX2O14529 1486 aa21.93■■□□□ 1.1
SNRNP27-201ENST00000244227 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
SNRNP27-201ENST00000244227 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
SNRNP27-201ENST00000244227 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
SNRNP27-201ENST00000244227 IGF1RP08069 1367 aa21.86■■□□□ 1.09
SNRNP27-201ENST00000244227 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
SNRNP27-201ENST00000244227 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
SNRNP27-201ENST00000244227 MRC2Q9UBG0 1479 aa21.75■■□□□ 1.07
SNRNP27-201ENST00000244227 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
SNRNP27-201ENST00000244227 CLIP1P30622 1438 aa21.72■■□□□ 1.07
SNRNP27-201ENST00000244227 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
SNRNP27-201ENST00000244227 TRIM26Q12899 539 aaPredicted RBP21.71■■□□□ 1.07
SNRNP27-201ENST00000244227 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
SNRNP27-201ENST00000244227 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
SNRNP27-201ENST00000244227 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.06
SNRNP27-201ENST00000244227 WDR62O43379 1518 aa21.64■■□□□ 1.05
SNRNP27-201ENST00000244227 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
SNRNP27-201ENST00000244227 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
SNRNP27-201ENST00000244227 ERCC6Q03468 1493 aa21.58■■□□□ 1.05
SNRNP27-201ENST00000244227 RANGAP1P46060 587 aaPredicted RBP21.58■■□□□ 1.05
SNRNP27-201ENST00000244227 CUL7Q14999 1698 aa21.57■■□□□ 1.04
SNRNP27-201ENST00000244227 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
SNRNP27-201ENST00000244227 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
SNRNP27-201ENST00000244227 ARAP1Q96P48 1450 aa21.52■■□□□ 1.04
SNRNP27-201ENST00000244227 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
SNRNP27-201ENST00000244227 ARHGAP35Q9NRY4 1499 aa21.49■■□□□ 1.03
SNRNP27-201ENST00000244227 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.038e-9■□□□□ 8.7
SNRNP27-201ENST00000244227 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
SNRNP27-201ENST00000244227 PBRM1Q86U86 1689 aa21.42■■□□□ 1.02
SNRNP27-201ENST00000244227 GRIN2BQ13224 1484 aa21.39■■□□□ 1.01
SNRNP27-201ENST00000244227 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
SNRNP27-201ENST00000244227 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms