RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 NISCHQ9Y2I1 1504 aa36.08■■■■□ 3.37
SNRNP27-202ENST00000409116 CCDC180Q9P1Z9 1646 aa31.87■■■□□ 2.69
SNRNP27-202ENST00000409116 ABCC9O60706 1549 aa30.9■■■□□ 2.54
SNRNP27-202ENST00000409116 ZCCHC6Q5VYS8 1495 aaKnown RBP30.14■■■□□ 2.42
SNRNP27-202ENST00000409116 DCAF8L2P0C7V8 631 aa30.04■■■□□ 2.4
SNRNP27-202ENST00000409116 NACADO15069 1562 aa29.87■■■□□ 2.37
SNRNP27-202ENST00000409116 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
SNRNP27-202ENST00000409116 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
SNRNP27-202ENST00000409116 MYO15BQ96JP2 1530 aa29.78■■■□□ 2.36
SNRNP27-202ENST00000409116 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
SNRNP27-202ENST00000409116 UNC13AQ9UPW8 1703 aa29.18■■■□□ 2.26
SNRNP27-202ENST00000409116 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.23
SNRNP27-202ENST00000409116 BICRAQ9NZM4 1560 aa28.95■■■□□ 2.23
SNRNP27-202ENST00000409116 SHROOM4Q9ULL8 1493 aa28.85■■■□□ 2.21
SNRNP27-202ENST00000409116 EIF4G1Q04637 1599 aaKnown RBP28.14■■■□□ 2.1
SNRNP27-202ENST00000409116 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
SNRNP27-202ENST00000409116 DNAJC5BQ9UF47 199 aa28.01■■■□□ 2.07
SNRNP27-202ENST00000409116 CC2D2AQ9P2K1 1620 aa27.94■■■□□ 2.06
SNRNP27-202ENST00000409116 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
SNRNP27-202ENST00000409116 BAZ1AQ9NRL2 1556 aaPredicted RBP27.93■■■□□ 2.06
SNRNP27-202ENST00000409116 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
SNRNP27-202ENST00000409116 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
SNRNP27-202ENST00000409116 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
SNRNP27-202ENST00000409116 SMARCA2P51531 1590 aa27.64■■■□□ 2.01
SNRNP27-202ENST00000409116 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
SNRNP27-202ENST00000409116 NCAPD3P42695 1498 aa27.57■■■□□ 2
SNRNP27-202ENST00000409116 WIZO95785 1651 aa27.56■■■□□ 2
SNRNP27-202ENST00000409116 HMGXB3Q12766 1538 aa27.47■■□□□ 1.99
SNRNP27-202ENST00000409116 BAZ1BQ9UIG0 1483 aaKnown RBP27.47■■□□□ 1.99
SNRNP27-202ENST00000409116 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
SNRNP27-202ENST00000409116 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
SNRNP27-202ENST00000409116 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
SNRNP27-202ENST00000409116 NESP48681 1621 aa26.86■■□□□ 1.89
SNRNP27-202ENST00000409116 AEBP2Q6ZN18 517 aaPredicted RBP26.86■■□□□ 1.89
SNRNP27-202ENST00000409116 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
SNRNP27-202ENST00000409116 LAMC3Q9Y6N6 1575 aa26.78■■□□□ 1.88
SNRNP27-202ENST00000409116 CFTRP13569 1480 aa26.73■■□□□ 1.87
SNRNP27-202ENST00000409116 PDS5BQ9NTI5 1447 aa26.6■■□□□ 1.85
SNRNP27-202ENST00000409116 ERCC6Q03468 1493 aa26.58■■□□□ 1.85
SNRNP27-202ENST00000409116 KIF21AQ7Z4S6 1674 aa26.53■■□□□ 1.84
SNRNP27-202ENST00000409116 PRDM2Q13029 1718 aa26.52■■□□□ 1.84
SNRNP27-202ENST00000409116 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
SNRNP27-202ENST00000409116 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
SNRNP27-202ENST00000409116 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
SNRNP27-202ENST00000409116 MRC2Q9UBG0 1479 aa26.32■■□□□ 1.8
SNRNP27-202ENST00000409116 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
SNRNP27-202ENST00000409116 WDR62O43379 1518 aa26.21■■□□□ 1.79
SNRNP27-202ENST00000409116 ABCC8Q09428 1581 aa26.14■■□□□ 1.78
SNRNP27-202ENST00000409116 TOPBP1Q92547 1522 aa26.14■■□□□ 1.77
SNRNP27-202ENST00000409116 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
SNRNP27-202ENST00000409116 CUX1P39880 1505 aa26.11■■□□□ 1.77
SNRNP27-202ENST00000409116 CUX2O14529 1486 aa26.11■■□□□ 1.77
SNRNP27-202ENST00000409116 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
SNRNP27-202ENST00000409116 SYNJ1O43426 1573 aa26■■□□□ 1.75
SNRNP27-202ENST00000409116 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
SNRNP27-202ENST00000409116 POLA1P09884 1462 aaPredicted RBP25.94■■□□□ 1.74
SNRNP27-202ENST00000409116 FGD5Q6ZNL6 1462 aa25.94■■□□□ 1.74
SNRNP27-202ENST00000409116 BIVM-ERCC5R4GMW8 1640 aa25.94■■□□□ 1.74
SNRNP27-202ENST00000409116 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
SNRNP27-202ENST00000409116 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
SNRNP27-202ENST00000409116 SOGA1O94964 1423 aa25.84■■□□□ 1.73
SNRNP27-202ENST00000409116 TARBP1Q13395 1621 aaKnown RBP25.82■■□□□ 1.72
SNRNP27-202ENST00000409116 ZNF608Q9ULD9 1512 aaPredicted RBP25.76■■□□□ 1.71
SNRNP27-202ENST00000409116 TRIM41Q8WV44 630 aa25.72■■□□□ 1.71
SNRNP27-202ENST00000409116 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
SNRNP27-202ENST00000409116 ABCA10Q8WWZ4 1543 aa25.69■■□□□ 1.7
SNRNP27-202ENST00000409116 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
SNRNP27-202ENST00000409116 TDRD9Q8NDG6 1382 aaKnown RBP25.67■■□□□ 1.7
SNRNP27-202ENST00000409116 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.78e-9■□□□□ 8.7
SNRNP27-202ENST00000409116 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
SNRNP27-202ENST00000409116 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
SNRNP27-202ENST00000409116 GAPVD1Q14C86 1478 aa25.55■■□□□ 1.68
SNRNP27-202ENST00000409116 GRIN2BQ13224 1484 aa25.49■■□□□ 1.67
SNRNP27-202ENST00000409116 KIF27Q86VH2 1401 aa25.48■■□□□ 1.67
SNRNP27-202ENST00000409116 PBRM1Q86U86 1689 aa25.47■■□□□ 1.67
SNRNP27-202ENST00000409116 SNAPC4Q5SXM2 1469 aa25.43■■□□□ 1.66
SNRNP27-202ENST00000409116 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
SNRNP27-202ENST00000409116 ERICH3Q5RHP9 1530 aa25.37■■□□□ 1.65
SNRNP27-202ENST00000409116 MAGI1Q96QZ7 1491 aaPredicted RBP25.36■■□□□ 1.65
SNRNP27-202ENST00000409116 IGF1RP08069 1367 aa25.33■■□□□ 1.65
SNRNP27-202ENST00000409116 ADAMTS12P58397 1594 aa25.3■■□□□ 1.64
SNRNP27-202ENST00000409116 FBLN2P98095 1184 aa25.28■■□□□ 1.64
SNRNP27-202ENST00000409116 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
SNRNP27-202ENST00000409116 FHAD1B1AJZ9 1412 aa25.25■■□□□ 1.63
SNRNP27-202ENST00000409116 CHD1O14646 1710 aa25.25■■□□□ 1.63
SNRNP27-202ENST00000409116 FAM9AQ8IZU1 332 aaPredicted RBP25.24■■□□□ 1.63
SNRNP27-202ENST00000409116 CHMP7Q8WUX9 453 aaPredicted RBP25.23■■□□□ 1.63
SNRNP27-202ENST00000409116 CUL7Q14999 1698 aa25.22■■□□□ 1.63
SNRNP27-202ENST00000409116 EEA1Q15075 1411 aa25.22■■□□□ 1.63
SNRNP27-202ENST00000409116 CARMIL1Q5VZK9 1371 aa25.19■■□□□ 1.62
SNRNP27-202ENST00000409116 GRIN2AQ12879 1464 aa25.16■■□□□ 1.62
SNRNP27-202ENST00000409116 CSRNP3Q8WYN3 585 aa25.15■■□□□ 1.62
SNRNP27-202ENST00000409116 OSCARQ8IYS5 282 aa25.11■■□□□ 1.61
SNRNP27-202ENST00000409116 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
SNRNP27-202ENST00000409116 RAPGEF2Q9Y4G8 1499 aa25.07■■□□□ 1.6
SNRNP27-202ENST00000409116 CEP170Q5SW79 1584 aa25.04■■□□□ 1.6
SNRNP27-202ENST00000409116 NUP160Q12769 1436 aa25.03■■□□□ 1.6
SNRNP27-202ENST00000409116 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
SNRNP27-202ENST00000409116 KIF21BO75037 1637 aa24.95■■□□□ 1.59
SNRNP27-202ENST00000409116 EHMT2Q96KQ7 1210 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms