RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 NISCHQ9Y2I1 1504 aa13.48□□□□□ -0.25
NCBP3-201ENST00000389005 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
NCBP3-201ENST00000389005 SUPT5HO00267 1087 aaKnown RBP13.21□□□□□ -0.29
NCBP3-201ENST00000389005 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
NCBP3-201ENST00000389005 PCGF6Q9BYE7 350 aa12.64□□□□□ -0.39
NCBP3-201ENST00000389005 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
NCBP3-201ENST00000389005 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
NCBP3-201ENST00000389005 FAM9AQ8IZU1 332 aaPredicted RBP12.41□□□□□ -0.42
NCBP3-201ENST00000389005 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
NCBP3-201ENST00000389005 APLP2Q06481 763 aa12.34□□□□□ -0.43
NCBP3-201ENST00000389005 CENPBP07199 599 aaPredicted RBP12.31□□□□□ -0.44
NCBP3-201ENST00000389005 TTBK1Q5TCY1 1321 aaPredicted RBP12.27□□□□□ -0.45
NCBP3-201ENST00000389005 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
NCBP3-201ENST00000389005 HRCP23327 699 aa12.23□□□□□ -0.45
NCBP3-201ENST00000389005 CCER1Q8TC90 406 aaPredicted RBP12.21□□□□□ -0.45
NCBP3-201ENST00000389005 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
NCBP3-201ENST00000389005 MYT1Q01538 1121 aa12.09□□□□□ -0.47
NCBP3-201ENST00000389005 CHIC1Q5VXU3 224 aa12.03□□□□□ -0.48
NCBP3-201ENST00000389005 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
NCBP3-201ENST00000389005 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
NCBP3-201ENST00000389005 RANGAP1P46060 587 aaPredicted RBP11.99□□□□□ -0.49
NCBP3-201ENST00000389005 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
NCBP3-201ENST00000389005 PPARGC1BQ86YN6 1023 aaKnown RBP11.96□□□□□ -0.49
NCBP3-201ENST00000389005 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
NCBP3-201ENST00000389005 NEFLP07196 543 aa11.89□□□□□ -0.51
NCBP3-201ENST00000389005 ATP1B4Q9UN42 357 aaPredicted RBP11.77□□□□□ -0.52
NCBP3-201ENST00000389005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
NCBP3-201ENST00000389005 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
NCBP3-201ENST00000389005 HNRNPUL2Q1KMD3 747 aaKnown RBP11.67□□□□□ -0.54
NCBP3-201ENST00000389005 ITGAEP38570 1179 aa11.6□□□□□ -0.55
NCBP3-201ENST00000389005 GTF3C3Q9Y5Q9 886 aa11.56□□□□□ -0.56
NCBP3-201ENST00000389005 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
NCBP3-201ENST00000389005 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
NCBP3-201ENST00000389005 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
NCBP3-201ENST00000389005 DCAF1Q9Y4B6 1507 aa11.41□□□□□ -0.58
NCBP3-201ENST00000389005 POLR3GLQ9BT43 218 aa11.41□□□□□ -0.58
NCBP3-201ENST00000389005 BCANQ96GW7 911 aa11.36□□□□□ -0.59
NCBP3-201ENST00000389005 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
NCBP3-201ENST00000389005 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
NCBP3-201ENST00000389005 FAM50AQ14320 339 aaKnown RBP11.3□□□□□ -0.6
NCBP3-201ENST00000389005 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
NCBP3-201ENST00000389005 ANP32CO43423 234 aa11.27□□□□□ -0.6
NCBP3-201ENST00000389005 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
NCBP3-201ENST00000389005 ZCCHC6Q5VYS8 1495 aaKnown RBP11.23□□□□□ -0.61
NCBP3-201ENST00000389005 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
NCBP3-201ENST00000389005 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
NCBP3-201ENST00000389005 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.62
NCBP3-201ENST00000389005 ABCC9O60706 1549 aa11.19□□□□□ -0.62
NCBP3-201ENST00000389005 MYO15BQ96JP2 1530 aa11.19□□□□□ -0.62
NCBP3-201ENST00000389005 TRIM52Q96A61 297 aa11.18□□□□□ -0.62
NCBP3-201ENST00000389005 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
NCBP3-201ENST00000389005 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
NCBP3-201ENST00000389005 FKBP8Q14318 412 aa11.07□□□□□ -0.64
NCBP3-201ENST00000389005 ZNF326Q5BKZ1 582 aaKnown RBP11.07□□□□□ -0.64
NCBP3-201ENST00000389005 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
NCBP3-201ENST00000389005 CCDC180Q9P1Z9 1646 aa11.05□□□□□ -0.64
NCBP3-201ENST00000389005 MIER1Q8N108 512 aa11.05□□□□□ -0.64
NCBP3-201ENST00000389005 ANP32AP39687 249 aaKnown RBP11.03□□□□□ -0.64
NCBP3-201ENST00000389005 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
NCBP3-201ENST00000389005 DDX10Q13206 875 aaKnown RBP11.01□□□□□ -0.65
NCBP3-201ENST00000389005 P3H3Q8IVL6 736 aa11□□□□□ -0.65
NCBP3-201ENST00000389005 TONSLQ96HA7 1378 aa10.98□□□□□ -0.65
NCBP3-201ENST00000389005 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
NCBP3-201ENST00000389005 NPM2Q86SE8 214 aaKnown RBP10.93□□□□□ -0.66
NCBP3-201ENST00000389005 CLIP1P30622 1438 aa10.92□□□□□ -0.66
NCBP3-201ENST00000389005 CEP162Q5TB80 1403 aa10.9□□□□□ -0.66
NCBP3-201ENST00000389005 RSF1Q96T23 1441 aaPredicted RBP10.9□□□□□ -0.67
NCBP3-201ENST00000389005 CANXP27824 592 aaKnown RBP10.89□□□□□ -0.67
NCBP3-201ENST00000389005 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
NCBP3-201ENST00000389005 FAM9BQ8IZU0 186 aa10.88□□□□□ -0.67
NCBP3-201ENST00000389005 EEA1Q15075 1411 aa10.86□□□□□ -0.67
NCBP3-201ENST00000389005 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
NCBP3-201ENST00000389005 GOLGA3Q08378 1498 aa10.83□□□□□ -0.68
NCBP3-201ENST00000389005 NBR1Q14596 966 aa10.83□□□□□ -0.68
NCBP3-201ENST00000389005 MRS2Q9HD23 443 aa10.83□□□□□ -0.68
NCBP3-201ENST00000389005 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
NCBP3-201ENST00000389005 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
NCBP3-201ENST00000389005 ANP32EQ9BTT0 268 aa10.81□□□□□ -0.68
NCBP3-201ENST00000389005 HIRIP3Q9BW71 556 aaPredicted RBP10.81□□□□□ -0.68
NCBP3-201ENST00000389005 ZNF777Q9ULD5 760 aaPredicted RBP10.81□□□□□ -0.68
NCBP3-201ENST00000389005 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
NCBP3-201ENST00000389005 EIF5BO60841 1220 aaKnown RBP10.8□□□□□ -0.68
NCBP3-201ENST00000389005 FBLN2P98095 1184 aa10.78□□□□□ -0.68
NCBP3-201ENST00000389005 TMC1Q8TDI8 760 aa10.77□□□□□ -0.69
NCBP3-201ENST00000389005 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
NCBP3-201ENST00000389005 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
NCBP3-201ENST00000389005 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
NCBP3-201ENST00000389005 MTUS2Q5JR59 1369 aa10.73□□□□□ -0.69
NCBP3-201ENST00000389005 BCL11AQ9H165 835 aa10.73□□□□□ -0.69
NCBP3-201ENST00000389005 NEFMP07197 916 aa10.72□□□□□ -0.69
NCBP3-201ENST00000389005 EIF4G2P78344 907 aaKnown RBP eCLIP10.72□□□□□ -0.698e-7■■■■■ 28.7
NCBP3-201ENST00000389005 RB1CC1Q8TDY2 1594 aa10.72□□□□□ -0.69
NCBP3-201ENST00000389005 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
NCBP3-201ENST00000389005 UPF2Q9HAU5 1272 aaKnown RBP10.72□□□□□ -0.69
NCBP3-201ENST00000389005 CEP164Q9UPV0 1460 aa10.71□□□□□ -0.69
NCBP3-201ENST00000389005 HSP90AA1P07900 732 aaKnown RBP10.69□□□□□ -0.7
NCBP3-201ENST00000389005 ANP32BQ92688 251 aaKnown RBP10.68□□□□□ -0.7
NCBP3-201ENST00000389005 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.68□□□□□ -0.7
NCBP3-201ENST00000389005 RRP7BPQ9NSQ0 103 aa10.67□□□□□ -0.7
NCBP3-201ENST00000389005 KDM2AQ9Y2K7 1162 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms