Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CASQ2O14958 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 AC010336.1-201ENST00000539278 4739 ntBASIC14.06□□□□□ -0.16
CASQ2O14958 AP3S2-216ENST00000617003 1561 ntBASIC14.06□□□□□ -0.16
CASQ2O14958 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CASQ2O14958 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 RNPS1P1-201ENST00000507437 918 ntBASIC14.06□□□□□ -0.16
CASQ2O14958 SLED1-202ENST00000512051 380 ntBASIC14.06□□□□□ -0.16
CASQ2O14958 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.06□□□□□ -0.16
CASQ2O14958 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 AC027307.2-201ENST00000591252 911 ntBASIC14.06□□□□□ -0.16
CASQ2O14958 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.06□□□□□ -0.16
CASQ2O14958 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CASQ2O14958 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.06□□□□□ -0.16
CASQ2O14958 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CASQ2O14958 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CASQ2O14958 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CASQ2O14958 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CASQ2O14958 POM121L14P-201ENST00000406100 1558 ntBASIC14.05□□□□□ -0.16
CASQ2O14958 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 HSPA8P5-201ENST00000456928 2069 ntBASIC14.05□□□□□ -0.16
CASQ2O14958 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CASQ2O14958 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.05□□□□□ -0.16
CASQ2O14958 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CASQ2O14958 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.05□□□□□ -0.16
CASQ2O14958 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.05□□□□□ -0.16
CASQ2O14958 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.05□□□□□ -0.16
CASQ2O14958 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CASQ2O14958 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
CASQ2O14958 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CASQ2O14958 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CASQ2O14958 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.05□□□□□ -0.16
CASQ2O14958 RARRES2P8-201ENST00000566335 367 ntBASIC14.05□□□□□ -0.16
CASQ2O14958 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.05□□□□□ -0.16
CASQ2O14958 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.05□□□□□ -0.16
CASQ2O14958 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.05□□□□□ -0.16
CASQ2O14958 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.05□□□□□ -0.16
CASQ2O14958 AP000550.4-202ENST00000639755 178 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms