RNA–Protein interactions for RNA: ENST00000341656.4

SPDYE2-201, Transcript of speedy/RINGO cell cycle regulator family member E2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPDYE2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2-201ENST00000341656 NISCHQ9Y2I1 1504 aa50.97■■■■■ 5.75
SPDYE2-201ENST00000341656 ABCC9O60706 1549 aa46.65■■■■■ 5.06
SPDYE2-201ENST00000341656 CCDC180Q9P1Z9 1646 aa46.1■■■■■ 4.97
SPDYE2-201ENST00000341656 DNAJC5BQ9UF47 199 aa44.28■■■■■ 4.68
SPDYE2-201ENST00000341656 RB1CC1Q8TDY2 1594 aa44.1■■■■■ 4.65
SPDYE2-201ENST00000341656 NACADO15069 1562 aa43.63■■■■■ 4.58
SPDYE2-201ENST00000341656 UNC13AQ9UPW8 1703 aa43.3■■■■■ 4.52
SPDYE2-201ENST00000341656 PABPN1Q86U42 306 aaKnown RBP eCLIP43.24■■■■■ 4.51
SPDYE2-201ENST00000341656 DCAF8L2P0C7V8 631 aa43.06■■■■■ 4.48
SPDYE2-201ENST00000341656 BICRAQ9NZM4 1560 aa42.96■■■■■ 4.47
SPDYE2-201ENST00000341656 MYO15BQ96JP2 1530 aa42.81■■■■■ 4.44
SPDYE2-201ENST00000341656 SHROOM4Q9ULL8 1493 aa42.2■■■■■ 4.35
SPDYE2-201ENST00000341656 ZCCHC6Q5VYS8 1495 aaKnown RBP42.17■■■■■ 4.34
SPDYE2-201ENST00000341656 CC2D2AQ9P2K1 1620 aa42.16■■■■■ 4.34
SPDYE2-201ENST00000341656 CECR2Q9BXF3 1484 aa42.06■■■■■ 4.32
SPDYE2-201ENST00000341656 DCAF1Q9Y4B6 1507 aa42.05■■■■■ 4.32
SPDYE2-201ENST00000341656 SCRIBQ14160 1630 aa41.98■■■■■ 4.31
SPDYE2-201ENST00000341656 EIF4G1Q04637 1599 aaKnown RBP41.91■■■■■ 4.3
SPDYE2-201ENST00000341656 DNAJC5Q9H3Z4 198 aa41.03■■■■■ 4.16
SPDYE2-201ENST00000341656 CUX2O14529 1486 aa40.44■■■■■ 4.06
SPDYE2-201ENST00000341656 NCAPD3P42695 1498 aa40.26■■■■■ 4.04
SPDYE2-201ENST00000341656 ERCC6Q03468 1493 aa40.26■■■■■ 4.04
SPDYE2-201ENST00000341656 ATAD2BQ9ULI0 1458 aa40.09■■■■■ 4.01
SPDYE2-201ENST00000341656 HMGXB3Q12766 1538 aa39.99■■■■□ 3.99
SPDYE2-201ENST00000341656 SMARCA4P51532 1647 aa39.97■■■■□ 3.99
SPDYE2-201ENST00000341656 NESP48681 1621 aa39.94■■■■□ 3.98
SPDYE2-201ENST00000341656 SMARCA2P51531 1590 aa39.93■■■■□ 3.98
SPDYE2-201ENST00000341656 THOC2Q8NI27 1593 aaKnown RBP39.75■■■■□ 3.95
SPDYE2-201ENST00000341656 BAZ1BQ9UIG0 1483 aaKnown RBP39.66■■■■□ 3.94
SPDYE2-201ENST00000341656 BAZ1AQ9NRL2 1556 aaPredicted RBP39.6■■■■□ 3.93
SPDYE2-201ENST00000341656 PEG3Q9GZU2 1588 aa39.56■■■■□ 3.92
SPDYE2-201ENST00000341656 LAMC3Q9Y6N6 1575 aa39.51■■■■□ 3.92
SPDYE2-201ENST00000341656 KIF21AQ7Z4S6 1674 aa39.48■■■■□ 3.91
SPDYE2-201ENST00000341656 MROH2BQ7Z745 1585 aa39.32■■■■□ 3.88
SPDYE2-201ENST00000341656 PDS5BQ9NTI5 1447 aa39.2■■■■□ 3.87
SPDYE2-201ENST00000341656 MRC2Q9UBG0 1479 aa39■■■■□ 3.83
SPDYE2-201ENST00000341656 WDR62O43379 1518 aa38.99■■■■□ 3.83
SPDYE2-201ENST00000341656 TRIM41Q8WV44 630 aa38.98■■■■□ 3.83
SPDYE2-201ENST00000341656 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
SPDYE2-201ENST00000341656 WIZO95785 1651 aa38.84■■■■□ 3.81
SPDYE2-201ENST00000341656 CEP164Q9UPV0 1460 aa38.71■■■■□ 3.79
SPDYE2-201ENST00000341656 FANCD2Q9BXW9 1451 aa38.6■■■■□ 3.77
SPDYE2-201ENST00000341656 CFTRP13569 1480 aa38.46■■■■□ 3.75
SPDYE2-201ENST00000341656 URB2Q14146 1524 aaKnown RBP38.39■■■■□ 3.74
SPDYE2-201ENST00000341656 OSCARQ8IYS5 282 aa38.32■■■■□ 3.72
SPDYE2-201ENST00000341656 TOP2AP11388 1531 aaKnown RBP38.28■■■■□ 3.72
SPDYE2-201ENST00000341656 RSF1Q96T23 1441 aaPredicted RBP38.2■■■■□ 3.71
SPDYE2-201ENST00000341656 PRDM2Q13029 1718 aa38.18■■■■□ 3.7
SPDYE2-201ENST00000341656 RIMBP3CA6NJZ7 1639 aa38.15■■■■□ 3.7
SPDYE2-201ENST00000341656 RIMBP3BA6NNM3 1639 aa38.15■■■■□ 3.7
SPDYE2-201ENST00000341656 RIMBP3Q9UFD9 1639 aa38.15■■■■□ 3.7
SPDYE2-201ENST00000341656 ZNF608Q9ULD9 1512 aaPredicted RBP38.02■■■■□ 3.68
SPDYE2-201ENST00000341656 IFT140Q96RY7 1462 aa37.93■■■■□ 3.66
SPDYE2-201ENST00000341656 ARHGEF11O15085 1522 aa37.92■■■■□ 3.66
SPDYE2-201ENST00000341656 TOPBP1Q92547 1522 aa37.83■■■■□ 3.65
SPDYE2-201ENST00000341656 EIF4G3O43432 1585 aaKnown RBP37.83■■■■□ 3.65
SPDYE2-201ENST00000341656 CCDC88BA6NC98 1476 aa37.78■■■■□ 3.64
SPDYE2-201ENST00000341656 CHD1O14646 1710 aa37.69■■■■□ 3.62
SPDYE2-201ENST00000341656 DNMBPQ6XZF7 1577 aa37.65■■■■□ 3.62
SPDYE2-201ENST00000341656 TARBP1Q13395 1621 aaKnown RBP37.61■■■■□ 3.61
SPDYE2-201ENST00000341656 ABCC8Q09428 1581 aa37.57■■■■□ 3.6
SPDYE2-201ENST00000341656 ARAP1Q96P48 1450 aa37.54■■■■□ 3.6
SPDYE2-201ENST00000341656 AQRO60306 1485 aaKnown RBP eCLIP37.52■■■■□ 3.6
SPDYE2-201ENST00000341656 CYB5RLQ6IPT4 315 aa37.5■■■■□ 3.59
SPDYE2-201ENST00000341656 POLA1P09884 1462 aaPredicted RBP37.41■■■■□ 3.58
SPDYE2-201ENST00000341656 RAD54L2Q9Y4B4 1467 aa37.27■■■■□ 3.56
SPDYE2-201ENST00000341656 TRHP20396 242 aaPredicted RBP37.26■■■■□ 3.56
SPDYE2-201ENST00000341656 FBLN2P98095 1184 aa37.26■■■■□ 3.56
SPDYE2-201ENST00000341656 CLASP1Q7Z460 1538 aa37.2■■■■□ 3.55
SPDYE2-201ENST00000341656 SNAPC4Q5SXM2 1469 aa37.18■■■■□ 3.54
SPDYE2-201ENST00000341656 TDRD9Q8NDG6 1382 aaKnown RBP37.16■■■■□ 3.54
SPDYE2-201ENST00000341656 SOGA1O94964 1423 aa37.11■■■■□ 3.53
SPDYE2-201ENST00000341656 WDR97A6NE52 1622 aa37.11■■■■□ 3.53
SPDYE2-201ENST00000341656 FGD5Q6ZNL6 1462 aa37.08■■■■□ 3.53
SPDYE2-201ENST00000341656 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
SPDYE2-201ENST00000341656 MAGI1Q96QZ7 1491 aaPredicted RBP37.01■■■■□ 3.51
SPDYE2-201ENST00000341656 CUX1P39880 1505 aa36.99■■■■□ 3.51
SPDYE2-201ENST00000341656 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
SPDYE2-201ENST00000341656 SYNJ2O15056 1496 aa36.88■■■■□ 3.5
SPDYE2-201ENST00000341656 PBRM1Q86U86 1689 aa36.88■■■■□ 3.49
SPDYE2-201ENST00000341656 CHMP7Q8WUX9 453 aaPredicted RBP36.87■■■■□ 3.49
SPDYE2-201ENST00000341656 GAPVD1Q14C86 1478 aa36.75■■■■□ 3.47
SPDYE2-201ENST00000341656 ABCA5Q8WWZ7 1642 aa36.7■■■■□ 3.47
SPDYE2-201ENST00000341656 ERCC6L2Q5T890 1561 aa36.61■■■■□ 3.45
SPDYE2-201ENST00000341656 ABCA10Q8WWZ4 1543 aa36.6■■■■□ 3.45
SPDYE2-201ENST00000341656 AEBP2Q6ZN18 517 aaPredicted RBP36.6■■■■□ 3.45
SPDYE2-201ENST00000341656 GRIN2AQ12879 1464 aa36.49■■■■□ 3.43
SPDYE2-201ENST00000341656 ADAMTS12P58397 1594 aa36.48■■■■□ 3.43
SPDYE2-201ENST00000341656 CEP170Q5SW79 1584 aa36.47■■■■□ 3.43
SPDYE2-201ENST00000341656 NUP160Q12769 1436 aa36.39■■■■□ 3.42
SPDYE2-201ENST00000341656 SHROOM2Q13796 1616 aa36.37■■■■□ 3.41
SPDYE2-201ENST00000341656 KIF13AQ9H1H9 1805 aa36.28■■■■□ 3.4
SPDYE2-201ENST00000341656 BIVM-ERCC5R4GMW8 1640 aa36.25■■■■□ 3.39
SPDYE2-201ENST00000341656 WRNQ14191 1432 aaPredicted RBP eCLIP36.25■■■■□ 3.39
SPDYE2-201ENST00000341656 TOP2BQ02880 1626 aa36.2■■■■□ 3.39
SPDYE2-201ENST00000341656 FHAD1B1AJZ9 1412 aa36.19■■■■□ 3.38
SPDYE2-201ENST00000341656 ERICH3Q5RHP9 1530 aa36.12■■■■□ 3.37
SPDYE2-201ENST00000341656 PRG4Q92954 1404 aaPredicted RBP36.03■■■■□ 3.36
SPDYE2-201ENST00000341656 RUSC2Q8N2Y8 1516 aa36■■■■□ 3.35
SPDYE2-201ENST00000341656 SUPT5HO00267 1087 aaKnown RBP35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms