RNA–Protein interactions for RNA: ENST00000265431.7

CALB1-201, Transcript of calbindin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALB1, Length 2,533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALB1-201ENST00000265431 NISCHQ9Y2I1 1504 aa28.75■■■□□ 2.19
CALB1-201ENST00000265431 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
CALB1-201ENST00000265431 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
CALB1-201ENST00000265431 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
CALB1-201ENST00000265431 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
CALB1-201ENST00000265431 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
CALB1-201ENST00000265431 DCAF8L2P0C7V8 631 aa23.63■■□□□ 1.37
CALB1-201ENST00000265431 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
CALB1-201ENST00000265431 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
CALB1-201ENST00000265431 ABCC9O60706 1549 aa22.93■■□□□ 1.26
CALB1-201ENST00000265431 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
CALB1-201ENST00000265431 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
CALB1-201ENST00000265431 NACADO15069 1562 aa22.66■■□□□ 1.22
CALB1-201ENST00000265431 HRCP23327 699 aa22.62■■□□□ 1.21
CALB1-201ENST00000265431 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
CALB1-201ENST00000265431 PCGF6Q9BYE7 350 aa22.52■■□□□ 1.2
CALB1-201ENST00000265431 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.19
CALB1-201ENST00000265431 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
CALB1-201ENST00000265431 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.17
CALB1-201ENST00000265431 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
CALB1-201ENST00000265431 TRIM26Q12899 539 aaPredicted RBP22.23■■□□□ 1.15
CALB1-201ENST00000265431 WIZO95785 1651 aa22.13■■□□□ 1.13
CALB1-201ENST00000265431 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
CALB1-201ENST00000265431 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
CALB1-201ENST00000265431 PPARGC1BQ86YN6 1023 aaKnown RBP21.97■■□□□ 1.11
CALB1-201ENST00000265431 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
CALB1-201ENST00000265431 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
CALB1-201ENST00000265431 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
CALB1-201ENST00000265431 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.09
CALB1-201ENST00000265431 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
CALB1-201ENST00000265431 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
CALB1-201ENST00000265431 SMARCA2P51531 1590 aa21.73■■□□□ 1.07
CALB1-201ENST00000265431 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
CALB1-201ENST00000265431 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
CALB1-201ENST00000265431 BICRAQ9NZM4 1560 aa21.58■■□□□ 1.05
CALB1-201ENST00000265431 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
CALB1-201ENST00000265431 EEA1Q15075 1411 aa21.52■■□□□ 1.04
CALB1-201ENST00000265431 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
CALB1-201ENST00000265431 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
CALB1-201ENST00000265431 SOGA1O94964 1423 aa21.45■■□□□ 1.02
CALB1-201ENST00000265431 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
CALB1-201ENST00000265431 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
CALB1-201ENST00000265431 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
CALB1-201ENST00000265431 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
CALB1-201ENST00000265431 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
CALB1-201ENST00000265431 GOLGA3Q08378 1498 aa21.28■■□□□ 1
CALB1-201ENST00000265431 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
CALB1-201ENST00000265431 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
CALB1-201ENST00000265431 CCER1Q8TC90 406 aaPredicted RBP21.21■□□□□ 0.99
CALB1-201ENST00000265431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.98
CALB1-201ENST00000265431 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
CALB1-201ENST00000265431 CEP164Q9UPV0 1460 aa21.18■□□□□ 0.98
CALB1-201ENST00000265431 KIF21BO75037 1637 aa21.15■□□□□ 0.98
CALB1-201ENST00000265431 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
CALB1-201ENST00000265431 CLIP1P30622 1438 aa21.01■□□□□ 0.95
CALB1-201ENST00000265431 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
CALB1-201ENST00000265431 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
CALB1-201ENST00000265431 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
CALB1-201ENST00000265431 VPS8Q8N3P4 1428 aa20.95■□□□□ 0.94
CALB1-201ENST00000265431 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
CALB1-201ENST00000265431 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
CALB1-201ENST00000265431 ERICH3Q5RHP9 1530 aa20.85■□□□□ 0.93
CALB1-201ENST00000265431 APLP2Q06481 763 aa20.84■□□□□ 0.93
CALB1-201ENST00000265431 PRXQ9BXM0 1461 aa20.82■□□□□ 0.92
CALB1-201ENST00000265431 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
CALB1-201ENST00000265431 CFTRP13569 1480 aa20.78■□□□□ 0.92
CALB1-201ENST00000265431 CUX1P39880 1505 aa20.76■□□□□ 0.91
CALB1-201ENST00000265431 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
CALB1-201ENST00000265431 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
CALB1-201ENST00000265431 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
CALB1-201ENST00000265431 ZNF316A6NFI3 1004 aaPredicted RBP20.7■□□□□ 0.9
CALB1-201ENST00000265431 RANGAP1P46060 587 aaPredicted RBP20.65■□□□□ 0.9
CALB1-201ENST00000265431 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
CALB1-201ENST00000265431 ARAP1Q96P48 1450 aa20.65■□□□□ 0.9
CALB1-201ENST00000265431 CENPBP07199 599 aaPredicted RBP20.59■□□□□ 0.89
CALB1-201ENST00000265431 PRDM2Q13029 1718 aa20.58■□□□□ 0.88
CALB1-201ENST00000265431 CLSPNQ9HAW4 1339 aa20.56■□□□□ 0.88
CALB1-201ENST00000265431 NEUROD1Q13562 356 aa20.55■□□□□ 0.88
CALB1-201ENST00000265431 CADPSQ9ULU8 1353 aa20.53■□□□□ 0.88
CALB1-201ENST00000265431 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
CALB1-201ENST00000265431 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
CALB1-201ENST00000265431 RRBP1Q9P2E9 1410 aaKnown RBP20.49■□□□□ 0.87
CALB1-201ENST00000265431 IGF1RP08069 1367 aa20.49■□□□□ 0.87
CALB1-201ENST00000265431 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
CALB1-201ENST00000265431 CUX2O14529 1486 aa20.46■□□□□ 0.87
CALB1-201ENST00000265431 DHX57Q6P158 1386 aaKnown RBP20.42■□□□□ 0.86
CALB1-201ENST00000265431 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
CALB1-201ENST00000265431 FGD5Q6ZNL6 1462 aa20.38■□□□□ 0.85
CALB1-201ENST00000265431 MAP3K1Q13233 1512 aa20.38■□□□□ 0.85
CALB1-201ENST00000265431 CCNB3Q8WWL7 1395 aa20.37■□□□□ 0.85
CALB1-201ENST00000265431 GTF3C3Q9Y5Q9 886 aa20.34■□□□□ 0.85
CALB1-201ENST00000265431 MIER1Q8N108 512 aa20.32■□□□□ 0.84
CALB1-201ENST00000265431 CC2D2AQ9P2K1 1620 aa20.31■□□□□ 0.84
CALB1-201ENST00000265431 FANCD2Q9BXW9 1451 aa20.29■□□□□ 0.84
CALB1-201ENST00000265431 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
CALB1-201ENST00000265431 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
CALB1-201ENST00000265431 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
CALB1-201ENST00000265431 LRRC9Q6ZRR7 1453 aa20.22■□□□□ 0.83
CALB1-201ENST00000265431 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
CALB1-201ENST00000265431 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms