RNA–Protein interactions for RNA: ENST00000300417.10

LRSAM1-201, Transcript of leucine rich repeat and sterile alpha motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRSAM1, Length 3,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRSAM1-201ENST00000300417 NISCHQ9Y2I1 1504 aa26.86■■□□□ 1.89
LRSAM1-201ENST00000300417 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
LRSAM1-201ENST00000300417 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
LRSAM1-201ENST00000300417 HRCP23327 699 aa22.86■■□□□ 1.25
LRSAM1-201ENST00000300417 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
LRSAM1-201ENST00000300417 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
LRSAM1-201ENST00000300417 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
LRSAM1-201ENST00000300417 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
LRSAM1-201ENST00000300417 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
LRSAM1-201ENST00000300417 PPARGC1BQ86YN6 1023 aaKnown RBP22.53■■□□□ 1.2
LRSAM1-201ENST00000300417 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
LRSAM1-201ENST00000300417 LOC105371045A0A1W2PR82 267 aa22.36■■□□□ 1.17
LRSAM1-201ENST00000300417 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
LRSAM1-201ENST00000300417 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
LRSAM1-201ENST00000300417 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
LRSAM1-201ENST00000300417 EHMT2Q96KQ7 1210 aa21.75■■□□□ 1.07
LRSAM1-201ENST00000300417 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
LRSAM1-201ENST00000300417 ZEB1P37275 1124 aaPredicted RBP21.69■■□□□ 1.06
LRSAM1-201ENST00000300417 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
LRSAM1-201ENST00000300417 ABCC9O60706 1549 aa21.51■■□□□ 1.03
LRSAM1-201ENST00000300417 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
LRSAM1-201ENST00000300417 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
LRSAM1-201ENST00000300417 RB1CC1Q8TDY2 1594 aa21.35■■□□□ 1.01
LRSAM1-201ENST00000300417 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
LRSAM1-201ENST00000300417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
LRSAM1-201ENST00000300417 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
LRSAM1-201ENST00000300417 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
LRSAM1-201ENST00000300417 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
LRSAM1-201ENST00000300417 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
LRSAM1-201ENST00000300417 NEUROD1Q13562 356 aa21.02■□□□□ 0.96
LRSAM1-201ENST00000300417 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
LRSAM1-201ENST00000300417 DIEXFQ68CQ4 756 aaKnown RBP20.97■□□□□ 0.95
LRSAM1-201ENST00000300417 WIZO95785 1651 aa20.9■□□□□ 0.94
LRSAM1-201ENST00000300417 GTF3C3Q9Y5Q9 886 aa20.9■□□□□ 0.94
LRSAM1-201ENST00000300417 CENPBP07199 599 aaPredicted RBP20.88■□□□□ 0.93
LRSAM1-201ENST00000300417 NACADO15069 1562 aa20.74■□□□□ 0.91
LRSAM1-201ENST00000300417 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
LRSAM1-201ENST00000300417 YTHDC1Q96MU7 727 aaKnown RBP20.69■□□□□ 0.9
LRSAM1-201ENST00000300417 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
LRSAM1-201ENST00000300417 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
LRSAM1-201ENST00000300417 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
LRSAM1-201ENST00000300417 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
LRSAM1-201ENST00000300417 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.89
LRSAM1-201ENST00000300417 SOGA1O94964 1423 aa20.61■□□□□ 0.89
LRSAM1-201ENST00000300417 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
LRSAM1-201ENST00000300417 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
LRSAM1-201ENST00000300417 EIF4G1Q04637 1599 aaKnown RBP20.56■□□□□ 0.88
LRSAM1-201ENST00000300417 HNRNPUL2Q1KMD3 747 aaKnown RBP20.56■□□□□ 0.88
LRSAM1-201ENST00000300417 TNIKQ9UKE5 1360 aa20.55■□□□□ 0.88
LRSAM1-201ENST00000300417 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
LRSAM1-201ENST00000300417 MIER1Q8N108 512 aa20.47■□□□□ 0.87
LRSAM1-201ENST00000300417 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
LRSAM1-201ENST00000300417 MYT1Q01538 1121 aa20.43■□□□□ 0.86
LRSAM1-201ENST00000300417 RANGAP1P46060 587 aaPredicted RBP20.41■□□□□ 0.86
LRSAM1-201ENST00000300417 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
LRSAM1-201ENST00000300417 EEA1Q15075 1411 aa20.36■□□□□ 0.85
LRSAM1-201ENST00000300417 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
LRSAM1-201ENST00000300417 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
LRSAM1-201ENST00000300417 APLP2Q06481 763 aa20.33■□□□□ 0.85
LRSAM1-201ENST00000300417 PABPN1Q86U42 306 aaKnown RBP eCLIP20.23■□□□□ 0.833e-6■■■□□ 15.4
LRSAM1-201ENST00000300417 CLIP1P30622 1438 aa20.22■□□□□ 0.83
LRSAM1-201ENST00000300417 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
LRSAM1-201ENST00000300417 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
LRSAM1-201ENST00000300417 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
LRSAM1-201ENST00000300417 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
LRSAM1-201ENST00000300417 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
LRSAM1-201ENST00000300417 KIF21BO75037 1637 aa20.01■□□□□ 0.79
LRSAM1-201ENST00000300417 SUPT16HQ9Y5B9 1047 aaKnown RBP19.94■□□□□ 0.78
LRSAM1-201ENST00000300417 DHX57Q6P158 1386 aaKnown RBP19.94■□□□□ 0.78
LRSAM1-201ENST00000300417 ITGAEP38570 1179 aa19.93■□□□□ 0.78
LRSAM1-201ENST00000300417 KANK4Q5T7N3 995 aaPredicted RBP19.93■□□□□ 0.78
LRSAM1-201ENST00000300417 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
LRSAM1-201ENST00000300417 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.78
LRSAM1-201ENST00000300417 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
LRSAM1-201ENST00000300417 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
LRSAM1-201ENST00000300417 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
LRSAM1-201ENST00000300417 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
LRSAM1-201ENST00000300417 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
LRSAM1-201ENST00000300417 BCANQ96GW7 911 aa19.73■□□□□ 0.75
LRSAM1-201ENST00000300417 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
LRSAM1-201ENST00000300417 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
LRSAM1-201ENST00000300417 CCNB3Q8WWL7 1395 aa19.68■□□□□ 0.74
LRSAM1-201ENST00000300417 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
LRSAM1-201ENST00000300417 RRBP1Q9P2E9 1410 aaKnown RBP19.65■□□□□ 0.74
LRSAM1-201ENST00000300417 DDX10Q13206 875 aaKnown RBP19.65■□□□□ 0.74
LRSAM1-201ENST00000300417 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
LRSAM1-201ENST00000300417 FKBP8Q14318 412 aa19.6■□□□□ 0.73
LRSAM1-201ENST00000300417 RAB3GAP2Q9H2M9 1393 aa19.6■□□□□ 0.73
LRSAM1-201ENST00000300417 SIN3AQ96ST3 1273 aa19.58■□□□□ 0.72
LRSAM1-201ENST00000300417 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
LRSAM1-201ENST00000300417 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
LRSAM1-201ENST00000300417 FAM50AQ14320 339 aaKnown RBP19.56■□□□□ 0.72
LRSAM1-201ENST00000300417 ATP1B4Q9UN42 357 aaPredicted RBP19.55■□□□□ 0.72
LRSAM1-201ENST00000300417 ANP32EQ9BTT0 268 aa19.55■□□□□ 0.72
LRSAM1-201ENST00000300417 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
LRSAM1-201ENST00000300417 ARHGAP35Q9NRY4 1499 aa19.52■□□□□ 0.72
LRSAM1-201ENST00000300417 CUX2O14529 1486 aa19.5■□□□□ 0.71
LRSAM1-201ENST00000300417 TRIM52Q96A61 297 aa19.49■□□□□ 0.71
LRSAM1-201ENST00000300417 CUX1P39880 1505 aa19.48■□□□□ 0.71
LRSAM1-201ENST00000300417 NEFLP07196 543 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms