RNA–Protein interactions for RNA: ENST00000254035.8

CKMT2-201, Transcript of creatine kinase, mitochondrial 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKMT2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKMT2-201ENST00000254035 NISCHQ9Y2I1 1504 aa36.78■■■■□ 3.48
CKMT2-201ENST00000254035 CCDC180Q9P1Z9 1646 aa32.75■■■□□ 2.83
CKMT2-201ENST00000254035 ABCC9O60706 1549 aa32.18■■■□□ 2.74
CKMT2-201ENST00000254035 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
CKMT2-201ENST00000254035 NACADO15069 1562 aa30.81■■■□□ 2.52
CKMT2-201ENST00000254035 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
CKMT2-201ENST00000254035 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
CKMT2-201ENST00000254035 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
CKMT2-201ENST00000254035 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
CKMT2-201ENST00000254035 UNC13AQ9UPW8 1703 aa30.2■■■□□ 2.43
CKMT2-201ENST00000254035 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.4
CKMT2-201ENST00000254035 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
CKMT2-201ENST00000254035 SCRIBQ14160 1630 aa29.9■■■□□ 2.38
CKMT2-201ENST00000254035 DNAJC5BQ9UF47 199 aa29.63■■■□□ 2.33
CKMT2-201ENST00000254035 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
CKMT2-201ENST00000254035 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
CKMT2-201ENST00000254035 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
CKMT2-201ENST00000254035 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
CKMT2-201ENST00000254035 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
CKMT2-201ENST00000254035 BAZ1AQ9NRL2 1556 aaPredicted RBP28.51■■■□□ 2.16
CKMT2-201ENST00000254035 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
CKMT2-201ENST00000254035 NCAPD3P42695 1498 aa28.42■■■□□ 2.14
CKMT2-201ENST00000254035 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
CKMT2-201ENST00000254035 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
CKMT2-201ENST00000254035 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
CKMT2-201ENST00000254035 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
CKMT2-201ENST00000254035 BAZ1BQ9UIG0 1483 aaKnown RBP28.2■■■□□ 2.1
CKMT2-201ENST00000254035 WIZO95785 1651 aa28.05■■■□□ 2.08
CKMT2-201ENST00000254035 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
CKMT2-201ENST00000254035 NESP48681 1621 aa27.81■■■□□ 2.04
CKMT2-201ENST00000254035 ERCC6Q03468 1493 aa27.74■■■□□ 2.03
CKMT2-201ENST00000254035 TOP2AP11388 1531 aaKnown RBP27.74■■■□□ 2.03
CKMT2-201ENST00000254035 LAMC3Q9Y6N6 1575 aa27.71■■■□□ 2.03
CKMT2-201ENST00000254035 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
CKMT2-201ENST00000254035 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
CKMT2-201ENST00000254035 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
CKMT2-201ENST00000254035 CUX2O14529 1486 aa27.47■■□□□ 1.99
CKMT2-201ENST00000254035 CCDC88BA6NC98 1476 aa27.41■■□□□ 1.98
CKMT2-201ENST00000254035 CFTRP13569 1480 aa27.41■■□□□ 1.98
CKMT2-201ENST00000254035 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
CKMT2-201ENST00000254035 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
CKMT2-201ENST00000254035 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
CKMT2-201ENST00000254035 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
CKMT2-201ENST00000254035 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
CKMT2-201ENST00000254035 PRDM2Q13029 1718 aa27.2■■□□□ 1.95
CKMT2-201ENST00000254035 WDR62O43379 1518 aa27.17■■□□□ 1.94
CKMT2-201ENST00000254035 URB2Q14146 1524 aaKnown RBP27.04■■□□□ 1.92
CKMT2-201ENST00000254035 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
CKMT2-201ENST00000254035 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
CKMT2-201ENST00000254035 DNMBPQ6XZF7 1577 aa26.81■■□□□ 1.88
CKMT2-201ENST00000254035 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
CKMT2-201ENST00000254035 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
CKMT2-201ENST00000254035 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
CKMT2-201ENST00000254035 CUX1P39880 1505 aa26.61■■□□□ 1.85
CKMT2-201ENST00000254035 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
CKMT2-201ENST00000254035 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
CKMT2-201ENST00000254035 FGD5Q6ZNL6 1462 aa26.54■■□□□ 1.84
CKMT2-201ENST00000254035 RAD54L2Q9Y4B4 1467 aa26.51■■□□□ 1.83
CKMT2-201ENST00000254035 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
CKMT2-201ENST00000254035 SOGA1O94964 1423 aa26.5■■□□□ 1.83
CKMT2-201ENST00000254035 AQRO60306 1485 aaKnown RBP eCLIP26.44■■□□□ 1.82
CKMT2-201ENST00000254035 WRNQ14191 1432 aaPredicted RBP eCLIP26.38■■□□□ 1.81
CKMT2-201ENST00000254035 TDRD9Q8NDG6 1382 aaKnown RBP26.37■■□□□ 1.81
CKMT2-201ENST00000254035 BIVM-ERCC5R4GMW8 1640 aa26.34■■□□□ 1.81
CKMT2-201ENST00000254035 SYNJ1O43426 1573 aa26.34■■□□□ 1.81
CKMT2-201ENST00000254035 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
CKMT2-201ENST00000254035 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
CKMT2-201ENST00000254035 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
CKMT2-201ENST00000254035 ABCA10Q8WWZ4 1543 aa26.26■■□□□ 1.79
CKMT2-201ENST00000254035 GRIN2BQ13224 1484 aa26.21■■□□□ 1.79
CKMT2-201ENST00000254035 SNAPC4Q5SXM2 1469 aa26.21■■□□□ 1.79
CKMT2-201ENST00000254035 GAPVD1Q14C86 1478 aa26.2■■□□□ 1.78
CKMT2-201ENST00000254035 CHD1O14646 1710 aa26.19■■□□□ 1.78
CKMT2-201ENST00000254035 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
CKMT2-201ENST00000254035 PBRM1Q86U86 1689 aa26.16■■□□□ 1.78
CKMT2-201ENST00000254035 FBLN2P98095 1184 aa26.15■■□□□ 1.78
CKMT2-201ENST00000254035 MAGI1Q96QZ7 1491 aaPredicted RBP26.14■■□□□ 1.78
CKMT2-201ENST00000254035 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
CKMT2-201ENST00000254035 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
CKMT2-201ENST00000254035 ERICH3Q5RHP9 1530 aa25.95■■□□□ 1.74
CKMT2-201ENST00000254035 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
CKMT2-201ENST00000254035 RIMBP3CA6NJZ7 1639 aa25.93■■□□□ 1.74
CKMT2-201ENST00000254035 RIMBP3BA6NNM3 1639 aa25.93■■□□□ 1.74
CKMT2-201ENST00000254035 RIMBP3Q9UFD9 1639 aa25.93■■□□□ 1.74
CKMT2-201ENST00000254035 ARHGEF11O15085 1522 aa25.91■■□□□ 1.74
CKMT2-201ENST00000254035 CLASP1Q7Z460 1538 aa25.89■■□□□ 1.74
CKMT2-201ENST00000254035 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
CKMT2-201ENST00000254035 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
CKMT2-201ENST00000254035 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
CKMT2-201ENST00000254035 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
CKMT2-201ENST00000254035 NUP160Q12769 1436 aa25.76■■□□□ 1.71
CKMT2-201ENST00000254035 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
CKMT2-201ENST00000254035 IGF1RP08069 1367 aa25.75■■□□□ 1.71
CKMT2-201ENST00000254035 ARAP1Q96P48 1450 aa25.69■■□□□ 1.7
CKMT2-201ENST00000254035 CUL7Q14999 1698 aa25.69■■□□□ 1.7
CKMT2-201ENST00000254035 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
CKMT2-201ENST00000254035 CARMIL1Q5VZK9 1371 aa25.6■■□□□ 1.69
CKMT2-201ENST00000254035 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
CKMT2-201ENST00000254035 SHROOM2Q13796 1616 aa25.57■■□□□ 1.68
CKMT2-201ENST00000254035 ERCC6L2Q5T890 1561 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms