RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
SRGAP3-202ENST00000383836 DCAF8L2P0C7V8 631 aa19.96■□□□□ 0.79
SRGAP3-202ENST00000383836 MYT1Q01538 1121 aa19.9■□□□□ 0.78
SRGAP3-202ENST00000383836 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
SRGAP3-202ENST00000383836 ERICH6Q7L0X2 663 aa19.47■□□□□ 0.71
SRGAP3-202ENST00000383836 CENPBP07199 599 aaPredicted RBP19.41■□□□□ 0.7
SRGAP3-202ENST00000383836 CCER1Q8TC90 406 aaPredicted RBP19.36■□□□□ 0.69
SRGAP3-202ENST00000383836 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
SRGAP3-202ENST00000383836 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
SRGAP3-202ENST00000383836 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
SRGAP3-202ENST00000383836 EHMT2Q96KQ7 1210 aa19.07■□□□□ 0.64
SRGAP3-202ENST00000383836 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
SRGAP3-202ENST00000383836 APLP2Q06481 763 aa18.98■□□□□ 0.63
SRGAP3-202ENST00000383836 NEFLP07196 543 aa18.83■□□□□ 0.6
SRGAP3-202ENST00000383836 YTHDC1Q96MU7 727 aaKnown RBP18.68■□□□□ 0.58
SRGAP3-202ENST00000383836 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
SRGAP3-202ENST00000383836 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.56
SRGAP3-202ENST00000383836 HRCP23327 699 aa18.41■□□□□ 0.54
SRGAP3-202ENST00000383836 DAXXQ9UER7 740 aaPredicted RBP18.4■□□□□ 0.54
SRGAP3-202ENST00000383836 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
SRGAP3-202ENST00000383836 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.5
SRGAP3-202ENST00000383836 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
SRGAP3-202ENST00000383836 RANGAP1P46060 587 aaPredicted RBP18.05■□□□□ 0.48
SRGAP3-202ENST00000383836 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
SRGAP3-202ENST00000383836 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
SRGAP3-202ENST00000383836 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
SRGAP3-202ENST00000383836 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
SRGAP3-202ENST00000383836 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
SRGAP3-202ENST00000383836 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
SRGAP3-202ENST00000383836 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
SRGAP3-202ENST00000383836 CDK11AQ9UQ88 783 aaPredicted RBP17.67■□□□□ 0.42
SRGAP3-202ENST00000383836 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
SRGAP3-202ENST00000383836 GLIPR1L2Q4G1C9 344 aa17.59■□□□□ 0.41
SRGAP3-202ENST00000383836 BCANQ96GW7 911 aa17.57■□□□□ 0.4
SRGAP3-202ENST00000383836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
SRGAP3-202ENST00000383836 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
SRGAP3-202ENST00000383836 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
SRGAP3-202ENST00000383836 HNRNPUL2Q1KMD3 747 aaKnown RBP17.52■□□□□ 0.39
SRGAP3-202ENST00000383836 ITGAEP38570 1179 aa17.51■□□□□ 0.39
SRGAP3-202ENST00000383836 LOC105371045A0A1W2PR82 267 aa17.5■□□□□ 0.39
SRGAP3-202ENST00000383836 MYT1LQ9UL68 1186 aa17.46■□□□□ 0.38
SRGAP3-202ENST00000383836 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
SRGAP3-202ENST00000383836 ANP32AP39687 249 aaKnown RBP17.44■□□□□ 0.38
SRGAP3-202ENST00000383836 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
SRGAP3-202ENST00000383836 ANP32CO43423 234 aa17.33■□□□□ 0.37
SRGAP3-202ENST00000383836 ANP32BQ92688 251 aaKnown RBP17.24■□□□□ 0.35
SRGAP3-202ENST00000383836 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
SRGAP3-202ENST00000383836 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
SRGAP3-202ENST00000383836 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
SRGAP3-202ENST00000383836 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
SRGAP3-202ENST00000383836 FKBP8Q14318 412 aa17.07■□□□□ 0.32
SRGAP3-202ENST00000383836 NBR1Q14596 966 aa17.07■□□□□ 0.32
SRGAP3-202ENST00000383836 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
SRGAP3-202ENST00000383836 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
SRGAP3-202ENST00000383836 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.32
SRGAP3-202ENST00000383836 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
SRGAP3-202ENST00000383836 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
SRGAP3-202ENST00000383836 UPF2Q9HAU5 1272 aaKnown RBP16.94■□□□□ 0.3
SRGAP3-202ENST00000383836 TRIM52Q96A61 297 aa16.94■□□□□ 0.3
SRGAP3-202ENST00000383836 ANP32EQ9BTT0 268 aa16.9■□□□□ 0.3
SRGAP3-202ENST00000383836 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
SRGAP3-202ENST00000383836 BCL11AQ9H165 835 aa16.83■□□□□ 0.28
SRGAP3-202ENST00000383836 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
SRGAP3-202ENST00000383836 ARXQ96QS3 562 aa16.79■□□□□ 0.28
SRGAP3-202ENST00000383836 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
SRGAP3-202ENST00000383836 HNRNPUQ00839 825 aaKnown RBP eCLIP16.78■□□□□ 0.28
SRGAP3-202ENST00000383836 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
SRGAP3-202ENST00000383836 NEFMP07197 916 aa16.73■□□□□ 0.27
SRGAP3-202ENST00000383836 TRIM44Q96DX7 344 aaPredicted RBP16.73■□□□□ 0.27
SRGAP3-202ENST00000383836 DDRGK1Q96HY6 314 aa16.69■□□□□ 0.26
SRGAP3-202ENST00000383836 ERICH6BQ5W0A0 696 aa16.67■□□□□ 0.26
SRGAP3-202ENST00000383836 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
SRGAP3-202ENST00000383836 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
SRGAP3-202ENST00000383836 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.61■□□□□ 0.25
SRGAP3-202ENST00000383836 BECN1Q14457 450 aa16.6■□□□□ 0.25
SRGAP3-202ENST00000383836 DDX10Q13206 875 aaKnown RBP16.59■□□□□ 0.25
SRGAP3-202ENST00000383836 NAP1L5Q96NT1 182 aaPredicted RBP16.58■□□□□ 0.24
SRGAP3-202ENST00000383836 TONSLQ96HA7 1378 aa16.57■□□□□ 0.24
SRGAP3-202ENST00000383836 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
SRGAP3-202ENST00000383836 MIER1Q8N108 512 aa16.55■□□□□ 0.24
SRGAP3-202ENST00000383836 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
SRGAP3-202ENST00000383836 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.23
SRGAP3-202ENST00000383836 IRX6P78412 446 aaPredicted RBP16.51■□□□□ 0.23
SRGAP3-202ENST00000383836 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
SRGAP3-202ENST00000383836 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
SRGAP3-202ENST00000383836 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
SRGAP3-202ENST00000383836 DNTTIP2Q5QJE6 756 aaKnown RBP16.46■□□□□ 0.23
SRGAP3-202ENST00000383836 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
SRGAP3-202ENST00000383836 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
SRGAP3-202ENST00000383836 PTMAP06454 111 aaKnown RBP16.43■□□□□ 0.22
SRGAP3-202ENST00000383836 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
SRGAP3-202ENST00000383836 DEKP35659 375 aaKnown RBP16.4■□□□□ 0.22
SRGAP3-202ENST00000383836 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
SRGAP3-202ENST00000383836 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
SRGAP3-202ENST00000383836 MYH16Q9H6N6 1097 aa16.34■□□□□ 0.21
SRGAP3-202ENST00000383836 SUPT16HQ9Y5B9 1047 aaKnown RBP16.31■□□□□ 0.2
SRGAP3-202ENST00000383836 L1TD1Q5T7N2 865 aaKnown RBP16.27■□□□□ 0.2
SRGAP3-202ENST00000383836 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
SRGAP3-202ENST00000383836 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
SRGAP3-202ENST00000383836 CHAF1AQ13111 956 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms