RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.9
AP3S2-216ENST00000617003 CCDC180Q9P1Z9 1646 aa34.89■■■■□ 3.18
AP3S2-216ENST00000617003 ABCC9O60706 1549 aa34.12■■■■□ 3.05
AP3S2-216ENST00000617003 DCAF8L2P0C7V8 631 aa33■■■□□ 2.87
AP3S2-216ENST00000617003 RB1CC1Q8TDY2 1594 aa32.82■■■□□ 2.84
AP3S2-216ENST00000617003 NACADO15069 1562 aa32.81■■■□□ 2.84
AP3S2-216ENST00000617003 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
AP3S2-216ENST00000617003 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
AP3S2-216ENST00000617003 DCAF1Q9Y4B6 1507 aa32.55■■■□□ 2.8
AP3S2-216ENST00000617003 UNC13AQ9UPW8 1703 aa32.13■■■□□ 2.73
AP3S2-216ENST00000617003 PABPN1Q86U42 306 aaKnown RBP eCLIP31.98■■■□□ 2.71
AP3S2-216ENST00000617003 SCRIBQ14160 1630 aa31.91■■■□□ 2.7
AP3S2-216ENST00000617003 BICRAQ9NZM4 1560 aa31.85■■■□□ 2.69
AP3S2-216ENST00000617003 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
AP3S2-216ENST00000617003 DNAJC5BQ9UF47 199 aa31.28■■■□□ 2.6
AP3S2-216ENST00000617003 EIF4G1Q04637 1599 aaKnown RBP30.98■■■□□ 2.55
AP3S2-216ENST00000617003 CC2D2AQ9P2K1 1620 aa30.85■■■□□ 2.53
AP3S2-216ENST00000617003 CECR2Q9BXF3 1484 aa30.71■■■□□ 2.51
AP3S2-216ENST00000617003 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
AP3S2-216ENST00000617003 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
AP3S2-216ENST00000617003 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
AP3S2-216ENST00000617003 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
AP3S2-216ENST00000617003 NCAPD3P42695 1498 aa30.29■■■□□ 2.44
AP3S2-216ENST00000617003 SMARCA2P51531 1590 aa30.27■■■□□ 2.44
AP3S2-216ENST00000617003 PEG3Q9GZU2 1588 aa30.19■■■□□ 2.42
AP3S2-216ENST00000617003 HMGXB3Q12766 1538 aa30.11■■■□□ 2.41
AP3S2-216ENST00000617003 RSF1Q96T23 1441 aaPredicted RBP30.08■■■□□ 2.41
AP3S2-216ENST00000617003 BAZ1BQ9UIG0 1483 aaKnown RBP30.08■■■□□ 2.41
AP3S2-216ENST00000617003 WIZO95785 1651 aa30.07■■■□□ 2.4
AP3S2-216ENST00000617003 TOP2AP11388 1531 aaKnown RBP29.7■■■□□ 2.34
AP3S2-216ENST00000617003 NESP48681 1621 aa29.57■■■□□ 2.32
AP3S2-216ENST00000617003 SUPT5HO00267 1087 aaKnown RBP29.51■■■□□ 2.31
AP3S2-216ENST00000617003 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.31
AP3S2-216ENST00000617003 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
AP3S2-216ENST00000617003 CCDC88BA6NC98 1476 aa29.41■■■□□ 2.3
AP3S2-216ENST00000617003 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
AP3S2-216ENST00000617003 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
AP3S2-216ENST00000617003 CFTRP13569 1480 aa29.27■■■□□ 2.28
AP3S2-216ENST00000617003 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.27
AP3S2-216ENST00000617003 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
AP3S2-216ENST00000617003 PRDM2Q13029 1718 aa29.04■■■□□ 2.24
AP3S2-216ENST00000617003 THOC2Q8NI27 1593 aaKnown RBP29.02■■■□□ 2.24
AP3S2-216ENST00000617003 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
AP3S2-216ENST00000617003 CUX2O14529 1486 aa28.98■■■□□ 2.23
AP3S2-216ENST00000617003 MRC2Q9UBG0 1479 aa28.95■■■□□ 2.22
AP3S2-216ENST00000617003 WDR62O43379 1518 aa28.83■■■□□ 2.21
AP3S2-216ENST00000617003 URB2Q14146 1524 aaKnown RBP28.8■■■□□ 2.2
AP3S2-216ENST00000617003 TOPBP1Q92547 1522 aa28.64■■■□□ 2.17
AP3S2-216ENST00000617003 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
AP3S2-216ENST00000617003 DNMBPQ6XZF7 1577 aa28.59■■■□□ 2.17
AP3S2-216ENST00000617003 CUX1P39880 1505 aa28.47■■■□□ 2.15
AP3S2-216ENST00000617003 IFT140Q96RY7 1462 aa28.41■■■□□ 2.14
AP3S2-216ENST00000617003 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
AP3S2-216ENST00000617003 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
AP3S2-216ENST00000617003 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.13
AP3S2-216ENST00000617003 SOGA1O94964 1423 aa28.32■■■□□ 2.12
AP3S2-216ENST00000617003 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
AP3S2-216ENST00000617003 ZNF608Q9ULD9 1512 aaPredicted RBP28.31■■■□□ 2.12
AP3S2-216ENST00000617003 TARBP1Q13395 1621 aaKnown RBP28.31■■■□□ 2.12
AP3S2-216ENST00000617003 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
AP3S2-216ENST00000617003 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
AP3S2-216ENST00000617003 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
AP3S2-216ENST00000617003 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.1
AP3S2-216ENST00000617003 TDRD9Q8NDG6 1382 aaKnown RBP28.16■■■□□ 2.1
AP3S2-216ENST00000617003 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
AP3S2-216ENST00000617003 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
AP3S2-216ENST00000617003 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
AP3S2-216ENST00000617003 DNAJC5Q9H3Z4 198 aa28.03■■■□□ 2.08
AP3S2-216ENST00000617003 GAPVD1Q14C86 1478 aa27.98■■■□□ 2.07
AP3S2-216ENST00000617003 GRIN2BQ13224 1484 aa27.93■■■□□ 2.06
AP3S2-216ENST00000617003 ABCA5Q8WWZ7 1642 aa27.93■■■□□ 2.06
AP3S2-216ENST00000617003 OSCARQ8IYS5 282 aa27.9■■■□□ 2.06
AP3S2-216ENST00000617003 PBRM1Q86U86 1689 aa27.89■■■□□ 2.06
AP3S2-216ENST00000617003 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.05
AP3S2-216ENST00000617003 FBLN2P98095 1184 aa27.87■■■□□ 2.05
AP3S2-216ENST00000617003 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
AP3S2-216ENST00000617003 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
AP3S2-216ENST00000617003 CHD1O14646 1710 aa27.81■■■□□ 2.04
AP3S2-216ENST00000617003 CHMP7Q8WUX9 453 aaPredicted RBP27.79■■■□□ 2.04
AP3S2-216ENST00000617003 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
AP3S2-216ENST00000617003 SYNJ2O15056 1496 aa27.73■■■□□ 2.03
AP3S2-216ENST00000617003 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
AP3S2-216ENST00000617003 IGF1RP08069 1367 aa27.65■■■□□ 2.02
AP3S2-216ENST00000617003 ADAMTS12P58397 1594 aa27.65■■■□□ 2.02
AP3S2-216ENST00000617003 FHAD1B1AJZ9 1412 aa27.65■■■□□ 2.02
AP3S2-216ENST00000617003 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
AP3S2-216ENST00000617003 RUSC2Q8N2Y8 1516 aa27.59■■■□□ 2.01
AP3S2-216ENST00000617003 GRIN2AQ12879 1464 aa27.57■■■□□ 2
AP3S2-216ENST00000617003 CUL7Q14999 1698 aa27.49■■□□□ 1.99
AP3S2-216ENST00000617003 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
AP3S2-216ENST00000617003 CLASP1Q7Z460 1538 aa27.48■■□□□ 1.99
AP3S2-216ENST00000617003 NUP160Q12769 1436 aa27.44■■□□□ 1.98
AP3S2-216ENST00000617003 CEP170Q5SW79 1584 aa27.44■■□□□ 1.98
AP3S2-216ENST00000617003 ARHGEF11O15085 1522 aa27.38■■□□□ 1.97
AP3S2-216ENST00000617003 RIMBP3CA6NJZ7 1639 aa27.38■■□□□ 1.97
AP3S2-216ENST00000617003 RIMBP3BA6NNM3 1639 aa27.38■■□□□ 1.97
AP3S2-216ENST00000617003 RIMBP3Q9UFD9 1639 aa27.38■■□□□ 1.97
AP3S2-216ENST00000617003 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
AP3S2-216ENST00000617003 RAPGEF2Q9Y4G8 1499 aa27.3■■□□□ 1.96
AP3S2-216ENST00000617003 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms