RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 NISCHQ9Y2I1 1504 aa39.66■■■■□ 3.94
TPM2-201ENST00000329305 CCDC180Q9P1Z9 1646 aa35.2■■■■□ 3.23
TPM2-201ENST00000329305 ABCC9O60706 1549 aa34.35■■■■□ 3.09
TPM2-201ENST00000329305 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
TPM2-201ENST00000329305 RB1CC1Q8TDY2 1594 aa33.11■■■□□ 2.89
TPM2-201ENST00000329305 NACADO15069 1562 aa33.09■■■□□ 2.89
TPM2-201ENST00000329305 ZCCHC6Q5VYS8 1495 aaKnown RBP33.08■■■□□ 2.89
TPM2-201ENST00000329305 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
TPM2-201ENST00000329305 DCAF1Q9Y4B6 1507 aa32.83■■■□□ 2.85
TPM2-201ENST00000329305 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
TPM2-201ENST00000329305 SCRIBQ14160 1630 aa32.14■■■□□ 2.74
TPM2-201ENST00000329305 PABPN1Q86U42 306 aaKnown RBP eCLIP32.12■■■□□ 2.734e-7■■■□□ 16.3
TPM2-201ENST00000329305 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
TPM2-201ENST00000329305 SHROOM4Q9ULL8 1493 aa31.8■■■□□ 2.68
TPM2-201ENST00000329305 DNAJC5BQ9UF47 199 aa31.34■■■□□ 2.61
TPM2-201ENST00000329305 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
TPM2-201ENST00000329305 CC2D2AQ9P2K1 1620 aa31.05■■■□□ 2.56
TPM2-201ENST00000329305 CECR2Q9BXF3 1484 aa30.87■■■□□ 2.53
TPM2-201ENST00000329305 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
TPM2-201ENST00000329305 SMARCA4P51532 1647 aa30.74■■■□□ 2.51
TPM2-201ENST00000329305 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
TPM2-201ENST00000329305 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
TPM2-201ENST00000329305 MROH2BQ7Z745 1585 aa30.55■■■□□ 2.48
TPM2-201ENST00000329305 NCAPD3P42695 1498 aa30.53■■■□□ 2.48
TPM2-201ENST00000329305 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
TPM2-201ENST00000329305 HMGXB3Q12766 1538 aa30.4■■■□□ 2.46
TPM2-201ENST00000329305 BAZ1BQ9UIG0 1483 aaKnown RBP30.35■■■□□ 2.45
TPM2-201ENST00000329305 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
TPM2-201ENST00000329305 WIZO95785 1651 aa30.21■■■□□ 2.43
TPM2-201ENST00000329305 TOP2AP11388 1531 aaKnown RBP29.95■■■□□ 2.38
TPM2-201ENST00000329305 NESP48681 1621 aa29.72■■■□□ 2.35
TPM2-201ENST00000329305 LAMC3Q9Y6N6 1575 aa29.71■■■□□ 2.35
TPM2-201ENST00000329305 CADPSQ9ULU8 1353 aa29.66■■■□□ 2.34
TPM2-201ENST00000329305 SUPT5HO00267 1087 aaKnown RBP29.66■■■□□ 2.34
TPM2-201ENST00000329305 ERCC6Q03468 1493 aa29.66■■■□□ 2.34
TPM2-201ENST00000329305 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
TPM2-201ENST00000329305 PDS5BQ9NTI5 1447 aa29.55■■■□□ 2.32
TPM2-201ENST00000329305 CFTRP13569 1480 aa29.5■■■□□ 2.31
TPM2-201ENST00000329305 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
TPM2-201ENST00000329305 FANCD2Q9BXW9 1451 aa29.33■■■□□ 2.29
TPM2-201ENST00000329305 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
TPM2-201ENST00000329305 CUX2O14529 1486 aa29.27■■■□□ 2.28
TPM2-201ENST00000329305 THOC2Q8NI27 1593 aaKnown RBP29.25■■■□□ 2.27
TPM2-201ENST00000329305 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
TPM2-201ENST00000329305 MRC2Q9UBG0 1479 aa29.22■■■□□ 2.27
TPM2-201ENST00000329305 WDR62O43379 1518 aa29.09■■■□□ 2.25
TPM2-201ENST00000329305 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
TPM2-201ENST00000329305 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
TPM2-201ENST00000329305 TOPBP1Q92547 1522 aa28.85■■■□□ 2.21
TPM2-201ENST00000329305 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
TPM2-201ENST00000329305 IFT140Q96RY7 1462 aa28.67■■■□□ 2.18
TPM2-201ENST00000329305 CUX1P39880 1505 aa28.66■■■□□ 2.18
TPM2-201ENST00000329305 POLA1P09884 1462 aaPredicted RBP28.62■■■□□ 2.17
TPM2-201ENST00000329305 WRNQ14191 1432 aaPredicted RBP eCLIP28.59■■■□□ 2.17
TPM2-201ENST00000329305 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
TPM2-201ENST00000329305 SOGA1O94964 1423 aa28.53■■■□□ 2.16
TPM2-201ENST00000329305 RAD54L2Q9Y4B4 1467 aa28.48■■■□□ 2.15
TPM2-201ENST00000329305 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
TPM2-201ENST00000329305 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
TPM2-201ENST00000329305 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
TPM2-201ENST00000329305 BIVM-ERCC5R4GMW8 1640 aa28.44■■■□□ 2.14
TPM2-201ENST00000329305 SYNJ1O43426 1573 aa28.44■■■□□ 2.14
TPM2-201ENST00000329305 EIF4G3O43432 1585 aaKnown RBP28.38■■■□□ 2.13
TPM2-201ENST00000329305 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.13
TPM2-201ENST00000329305 TDRD9Q8NDG6 1382 aaKnown RBP28.34■■■□□ 2.13
TPM2-201ENST00000329305 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
TPM2-201ENST00000329305 ABCA10Q8WWZ4 1543 aa28.31■■■□□ 2.12
TPM2-201ENST00000329305 GAPVD1Q14C86 1478 aa28.2■■■□□ 2.1
TPM2-201ENST00000329305 DNAJC5Q9H3Z4 198 aa28.19■■■□□ 2.1
TPM2-201ENST00000329305 GRIN2BQ13224 1484 aa28.19■■■□□ 2.1
TPM2-201ENST00000329305 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
TPM2-201ENST00000329305 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
TPM2-201ENST00000329305 MAGI1Q96QZ7 1491 aaPredicted RBP28.1■■■□□ 2.09
TPM2-201ENST00000329305 OSCARQ8IYS5 282 aa28.1■■■□□ 2.09
TPM2-201ENST00000329305 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
TPM2-201ENST00000329305 FBLN2P98095 1184 aa28.06■■■□□ 2.08
TPM2-201ENST00000329305 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
TPM2-201ENST00000329305 CHMP7Q8WUX9 453 aaPredicted RBP28.01■■■□□ 2.07
TPM2-201ENST00000329305 SYNJ2O15056 1496 aa27.99■■■□□ 2.07
TPM2-201ENST00000329305 KIF27Q86VH2 1401 aa27.99■■■□□ 2.07
TPM2-201ENST00000329305 ERICH3Q5RHP9 1530 aa27.98■■■□□ 2.07
TPM2-201ENST00000329305 CHD1O14646 1710 aa27.96■■■□□ 2.07
TPM2-201ENST00000329305 FHAD1B1AJZ9 1412 aa27.89■■■□□ 2.06
TPM2-201ENST00000329305 ADAMTS12P58397 1594 aa27.89■■■□□ 2.05
TPM2-201ENST00000329305 IGF1RP08069 1367 aa27.82■■■□□ 2.04
TPM2-201ENST00000329305 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
TPM2-201ENST00000329305 CUL7Q14999 1698 aa27.75■■■□□ 2.03
TPM2-201ENST00000329305 CHIC1Q5VXU3 224 aa27.71■■■□□ 2.03
TPM2-201ENST00000329305 CLASP1Q7Z460 1538 aa27.69■■■□□ 2.02
TPM2-201ENST00000329305 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
TPM2-201ENST00000329305 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
TPM2-201ENST00000329305 NUP160Q12769 1436 aa27.67■■■□□ 2.02
TPM2-201ENST00000329305 CEP170Q5SW79 1584 aa27.63■■■□□ 2.01
TPM2-201ENST00000329305 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
TPM2-201ENST00000329305 EEA1Q15075 1411 aa27.56■■■□□ 2
TPM2-201ENST00000329305 RIMBP3CA6NJZ7 1639 aa27.56■■■□□ 2
TPM2-201ENST00000329305 RIMBP3BA6NNM3 1639 aa27.56■■■□□ 2
TPM2-201ENST00000329305 RIMBP3Q9UFD9 1639 aa27.56■■■□□ 2
TPM2-201ENST00000329305 RAPGEF2Q9Y4G8 1499 aa27.54■■■□□ 2
TPM2-201ENST00000329305 CSRNP3Q8WYN3 585 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms