RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 NISCHQ9Y2I1 1504 aa27.18■■□□□ 1.94
GFAP-201ENST00000253408 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
GFAP-201ENST00000253408 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
GFAP-201ENST00000253408 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
GFAP-201ENST00000253408 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
GFAP-201ENST00000253408 PCGF6Q9BYE7 350 aa22.99■■□□□ 1.27
GFAP-201ENST00000253408 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
GFAP-201ENST00000253408 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
GFAP-201ENST00000253408 HRCP23327 699 aa22.91■■□□□ 1.26
GFAP-201ENST00000253408 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
GFAP-201ENST00000253408 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.22
GFAP-201ENST00000253408 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.22
GFAP-201ENST00000253408 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
GFAP-201ENST00000253408 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
GFAP-201ENST00000253408 DCAF1Q9Y4B6 1507 aa22.18■■□□□ 1.14
GFAP-201ENST00000253408 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
GFAP-201ENST00000253408 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
GFAP-201ENST00000253408 SCRIBQ14160 1630 aa21.83■■□□□ 1.08
GFAP-201ENST00000253408 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
GFAP-201ENST00000253408 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
GFAP-201ENST00000253408 ABCC9O60706 1549 aa21.74■■□□□ 1.07
GFAP-201ENST00000253408 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
GFAP-201ENST00000253408 TTBK1Q5TCY1 1321 aaPredicted RBP21.61■■□□□ 1.05
GFAP-201ENST00000253408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
GFAP-201ENST00000253408 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
GFAP-201ENST00000253408 SCAF1Q9H7N4 1312 aaKnown RBP21.44■■□□□ 1.02
GFAP-201ENST00000253408 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
GFAP-201ENST00000253408 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
GFAP-201ENST00000253408 WIZO95785 1651 aa21.2■□□□□ 0.98
GFAP-201ENST00000253408 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
GFAP-201ENST00000253408 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
GFAP-201ENST00000253408 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
GFAP-201ENST00000253408 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.97
GFAP-201ENST00000253408 ACIN1Q9UKV3 1341 aaKnown RBP21.07■□□□□ 0.96
GFAP-201ENST00000253408 NACADO15069 1562 aa21.01■□□□□ 0.95
GFAP-201ENST00000253408 GTF3C3Q9Y5Q9 886 aa21■□□□□ 0.95
GFAP-201ENST00000253408 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
GFAP-201ENST00000253408 CENPBP07199 599 aaPredicted RBP20.98■□□□□ 0.95
GFAP-201ENST00000253408 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
GFAP-201ENST00000253408 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
GFAP-201ENST00000253408 RANGAP1P46060 587 aaPredicted RBP20.93■□□□□ 0.94
GFAP-201ENST00000253408 CEP162Q5TB80 1403 aa20.9■□□□□ 0.94
GFAP-201ENST00000253408 SOGA1O94964 1423 aa20.89■□□□□ 0.93
GFAP-201ENST00000253408 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
GFAP-201ENST00000253408 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
GFAP-201ENST00000253408 CSRNP3Q8WYN3 585 aa20.83■□□□□ 0.93
GFAP-201ENST00000253408 PABPN1Q86U42 306 aaKnown RBP eCLIP20.77■□□□□ 0.92
GFAP-201ENST00000253408 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
GFAP-201ENST00000253408 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
GFAP-201ENST00000253408 TNIKQ9UKE5 1360 aa20.71■□□□□ 0.91
GFAP-201ENST00000253408 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
GFAP-201ENST00000253408 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
GFAP-201ENST00000253408 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
GFAP-201ENST00000253408 APLP2Q06481 763 aa20.67■□□□□ 0.9
GFAP-201ENST00000253408 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
GFAP-201ENST00000253408 MIER1Q8N108 512 aa20.62■□□□□ 0.89
GFAP-201ENST00000253408 SMARCA4P51532 1647 aa20.61■□□□□ 0.89
GFAP-201ENST00000253408 GOLGA3Q08378 1498 aa20.56■□□□□ 0.88
GFAP-201ENST00000253408 EEA1Q15075 1411 aa20.51■□□□□ 0.87
GFAP-201ENST00000253408 CLIP1P30622 1438 aa20.47■□□□□ 0.87
GFAP-201ENST00000253408 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
GFAP-201ENST00000253408 ITGAEP38570 1179 aa20.34■□□□□ 0.85
GFAP-201ENST00000253408 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
GFAP-201ENST00000253408 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
GFAP-201ENST00000253408 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
GFAP-201ENST00000253408 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
GFAP-201ENST00000253408 KANK4Q5T7N3 995 aaPredicted RBP20.18■□□□□ 0.82
GFAP-201ENST00000253408 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
GFAP-201ENST00000253408 KIF21BO75037 1637 aa20.16■□□□□ 0.82
GFAP-201ENST00000253408 MYT1Q01538 1121 aa20.13■□□□□ 0.81
GFAP-201ENST00000253408 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
GFAP-201ENST00000253408 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
GFAP-201ENST00000253408 DHX57Q6P158 1386 aaKnown RBP20.09■□□□□ 0.81
GFAP-201ENST00000253408 ATP1B4Q9UN42 357 aaPredicted RBP20.03■□□□□ 0.8
GFAP-201ENST00000253408 SUPT16HQ9Y5B9 1047 aaKnown RBP20.01■□□□□ 0.79
GFAP-201ENST00000253408 BCANQ96GW7 911 aa19.99■□□□□ 0.79
GFAP-201ENST00000253408 KCNH8Q96L42 1107 aa19.97■□□□□ 0.79
GFAP-201ENST00000253408 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
GFAP-201ENST00000253408 PEG3Q9GZU2 1588 aa19.94■□□□□ 0.78
GFAP-201ENST00000253408 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
GFAP-201ENST00000253408 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
GFAP-201ENST00000253408 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
GFAP-201ENST00000253408 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
GFAP-201ENST00000253408 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
GFAP-201ENST00000253408 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
GFAP-201ENST00000253408 DDX10Q13206 875 aaKnown RBP19.87■□□□□ 0.77
GFAP-201ENST00000253408 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
GFAP-201ENST00000253408 PRXQ9BXM0 1461 aa19.84■□□□□ 0.77
GFAP-201ENST00000253408 SIN3AQ96ST3 1273 aa19.84■□□□□ 0.77
GFAP-201ENST00000253408 RAB3GAP2Q9H2M9 1393 aa19.81■□□□□ 0.76
GFAP-201ENST00000253408 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.76
GFAP-201ENST00000253408 RRBP1Q9P2E9 1410 aaKnown RBP19.77■□□□□ 0.76
GFAP-201ENST00000253408 FKBP8Q14318 412 aa19.76■□□□□ 0.75
GFAP-201ENST00000253408 TSHZ2Q9NRE2 1034 aa19.76■□□□□ 0.75
GFAP-201ENST00000253408 CUX1P39880 1505 aa19.75■□□□□ 0.75
GFAP-201ENST00000253408 ARHGAP35Q9NRY4 1499 aa19.74■□□□□ 0.75
GFAP-201ENST00000253408 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
GFAP-201ENST00000253408 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
GFAP-201ENST00000253408 CUX2O14529 1486 aa19.68■□□□□ 0.74
GFAP-201ENST00000253408 NEFLP07196 543 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms