RNA–Protein interactions for RNA: ENST00000495313.5

SWI5-205, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SWI5, Length 466 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-205ENST00000495313 NISCHQ9Y2I1 1504 aa41.44■■■■■ 4.22
SWI5-205ENST00000495313 ABCC9O60706 1549 aa37.58■■■■□ 3.61
SWI5-205ENST00000495313 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
SWI5-205ENST00000495313 RB1CC1Q8TDY2 1594 aa35.67■■■■□ 3.3
SWI5-205ENST00000495313 DNAJC5BQ9UF47 199 aa35.6■■■■□ 3.29
SWI5-205ENST00000495313 NACADO15069 1562 aa35.37■■■■□ 3.25
SWI5-205ENST00000495313 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
SWI5-205ENST00000495313 PABPN1Q86U42 306 aaKnown RBP eCLIP34.97■■■■□ 3.19
SWI5-205ENST00000495313 MYO15BQ96JP2 1530 aa34.83■■■■□ 3.17
SWI5-205ENST00000495313 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
SWI5-205ENST00000495313 BICRAQ9NZM4 1560 aa34.62■■■■□ 3.13
SWI5-205ENST00000495313 DCAF1Q9Y4B6 1507 aa34.25■■■■□ 3.07
SWI5-205ENST00000495313 ZCCHC6Q5VYS8 1495 aaKnown RBP34.25■■■■□ 3.07
SWI5-205ENST00000495313 SHROOM4Q9ULL8 1493 aa34.2■■■■□ 3.07
SWI5-205ENST00000495313 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
SWI5-205ENST00000495313 CECR2Q9BXF3 1484 aa33.92■■■■□ 3.02
SWI5-205ENST00000495313 SCRIBQ14160 1630 aa33.9■■■■□ 3.02
SWI5-205ENST00000495313 EIF4G1Q04637 1599 aaKnown RBP33.8■■■■□ 3
SWI5-205ENST00000495313 DNAJC5Q9H3Z4 198 aa32.97■■■□□ 2.87
SWI5-205ENST00000495313 NCAPD3P42695 1498 aa32.69■■■□□ 2.82
SWI5-205ENST00000495313 CUX2O14529 1486 aa32.59■■■□□ 2.81
SWI5-205ENST00000495313 ATAD2BQ9ULI0 1458 aa32.51■■■□□ 2.79
SWI5-205ENST00000495313 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
SWI5-205ENST00000495313 SMARCA2P51531 1590 aa32.4■■■□□ 2.78
SWI5-205ENST00000495313 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
SWI5-205ENST00000495313 SMARCA4P51532 1647 aa32.34■■■□□ 2.77
SWI5-205ENST00000495313 NESP48681 1621 aa32.18■■■□□ 2.74
SWI5-205ENST00000495313 BAZ1AQ9NRL2 1556 aaPredicted RBP32.18■■■□□ 2.74
SWI5-205ENST00000495313 BAZ1BQ9UIG0 1483 aaKnown RBP32.16■■■□□ 2.74
SWI5-205ENST00000495313 PEG3Q9GZU2 1588 aa32.09■■■□□ 2.73
SWI5-205ENST00000495313 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
SWI5-205ENST00000495313 THOC2Q8NI27 1593 aaKnown RBP31.92■■■□□ 2.7
SWI5-205ENST00000495313 MROH2BQ7Z745 1585 aa31.9■■■□□ 2.7
SWI5-205ENST00000495313 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
SWI5-205ENST00000495313 KIF21AQ7Z4S6 1674 aa31.71■■■□□ 2.67
SWI5-205ENST00000495313 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
SWI5-205ENST00000495313 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
SWI5-205ENST00000495313 WDR62O43379 1518 aa31.45■■■□□ 2.63
SWI5-205ENST00000495313 WIZO95785 1651 aa31.44■■■□□ 2.62
SWI5-205ENST00000495313 CEP164Q9UPV0 1460 aa31.33■■■□□ 2.61
SWI5-205ENST00000495313 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
SWI5-205ENST00000495313 FANCD2Q9BXW9 1451 aa31.27■■■□□ 2.6
SWI5-205ENST00000495313 CFTRP13569 1480 aa31.24■■■□□ 2.59
SWI5-205ENST00000495313 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
SWI5-205ENST00000495313 OSCARQ8IYS5 282 aa31.08■■■□□ 2.57
SWI5-205ENST00000495313 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
SWI5-205ENST00000495313 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
SWI5-205ENST00000495313 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
SWI5-205ENST00000495313 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.51
SWI5-205ENST00000495313 IFT140Q96RY7 1462 aa30.74■■■□□ 2.51
SWI5-205ENST00000495313 ZNF608Q9ULD9 1512 aaPredicted RBP30.68■■■□□ 2.5
SWI5-205ENST00000495313 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
SWI5-205ENST00000495313 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
SWI5-205ENST00000495313 RIMBP3CA6NJZ7 1639 aa30.6■■■□□ 2.49
SWI5-205ENST00000495313 RIMBP3BA6NNM3 1639 aa30.6■■■□□ 2.49
SWI5-205ENST00000495313 RIMBP3Q9UFD9 1639 aa30.6■■■□□ 2.49
SWI5-205ENST00000495313 ARHGEF11O15085 1522 aa30.5■■■□□ 2.47
SWI5-205ENST00000495313 DNMBPQ6XZF7 1577 aa30.49■■■□□ 2.47
SWI5-205ENST00000495313 EIF4G3O43432 1585 aaKnown RBP30.46■■■□□ 2.47
SWI5-205ENST00000495313 TARBP1Q13395 1621 aaKnown RBP30.39■■■□□ 2.46
SWI5-205ENST00000495313 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.453e-7■■■□□ 17
SWI5-205ENST00000495313 CYB5RLQ6IPT4 315 aa30.34■■■□□ 2.45
SWI5-205ENST00000495313 POLA1P09884 1462 aaPredicted RBP30.31■■■□□ 2.44
SWI5-205ENST00000495313 CHD1O14646 1710 aa30.26■■■□□ 2.43
SWI5-205ENST00000495313 FBLN2P98095 1184 aa30.25■■■□□ 2.43
SWI5-205ENST00000495313 SOGA1O94964 1423 aa30.2■■■□□ 2.42
SWI5-205ENST00000495313 RAD54L2Q9Y4B4 1467 aa30.19■■■□□ 2.42
SWI5-205ENST00000495313 ARAP1Q96P48 1450 aa30.18■■■□□ 2.42
SWI5-205ENST00000495313 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
SWI5-205ENST00000495313 WDR97A6NE52 1622 aa30.09■■■□□ 2.41
SWI5-205ENST00000495313 TRHP20396 242 aaPredicted RBP30.08■■■□□ 2.41
SWI5-205ENST00000495313 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
SWI5-205ENST00000495313 SNAPC4Q5SXM2 1469 aa30.04■■■□□ 2.4
SWI5-205ENST00000495313 CHMP7Q8WUX9 453 aaPredicted RBP30.02■■■□□ 2.4
SWI5-205ENST00000495313 MAGI1Q96QZ7 1491 aaPredicted RBP29.99■■■□□ 2.39
SWI5-205ENST00000495313 CLASP1Q7Z460 1538 aa29.99■■■□□ 2.39
SWI5-205ENST00000495313 CUX1P39880 1505 aa29.98■■■□□ 2.39
SWI5-205ENST00000495313 GRIN2BQ13224 1484 aa29.96■■■□□ 2.39
SWI5-205ENST00000495313 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
SWI5-205ENST00000495313 SYNJ2O15056 1496 aa29.89■■■□□ 2.38
SWI5-205ENST00000495313 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
SWI5-205ENST00000495313 ABCA10Q8WWZ4 1543 aa29.74■■■□□ 2.35
SWI5-205ENST00000495313 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
SWI5-205ENST00000495313 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
SWI5-205ENST00000495313 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.325e-6■■■■■ 29.2
SWI5-205ENST00000495313 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
SWI5-205ENST00000495313 NUP160Q12769 1436 aa29.49■■■□□ 2.31
SWI5-205ENST00000495313 SUPT5HO00267 1087 aaKnown RBP29.49■■■□□ 2.31
SWI5-205ENST00000495313 AEBP2Q6ZN18 517 aaPredicted RBP29.46■■■□□ 2.31
SWI5-205ENST00000495313 ADAMTS12P58397 1594 aa29.46■■■□□ 2.31
SWI5-205ENST00000495313 ERCC6L2Q5T890 1561 aa29.46■■■□□ 2.31
SWI5-205ENST00000495313 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
SWI5-205ENST00000495313 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
SWI5-205ENST00000495313 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
SWI5-205ENST00000495313 BIVM-ERCC5R4GMW8 1640 aa29.41■■■□□ 2.3
SWI5-205ENST00000495313 SHROOM2Q13796 1616 aa29.36■■■□□ 2.29
SWI5-205ENST00000495313 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
SWI5-205ENST00000495313 JPH4Q96JJ6 628 aa29.23■■■□□ 2.27
SWI5-205ENST00000495313 PRG4Q92954 1404 aaPredicted RBP29.22■■■□□ 2.27
SWI5-205ENST00000495313 KIF13AQ9H1H9 1805 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms