RNA–Protein interactions for RNA: ENST00000639755.1

AP000550.4-202, humanhuman

BASIC

Gene AP000550.4, Length 178 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.4-202ENST00000639755 NISCHQ9Y2I1 1504 aa46.08■■■■■ 4.97
AP000550.4-202ENST00000639755 CCDC180Q9P1Z9 1646 aa41.42■■■■■ 4.22
AP000550.4-202ENST00000639755 ABCC9O60706 1549 aa41.29■■■■■ 4.2
AP000550.4-202ENST00000639755 RB1CC1Q8TDY2 1594 aa39.39■■■■□ 3.9
AP000550.4-202ENST00000639755 NACADO15069 1562 aa39.13■■■■□ 3.85
AP000550.4-202ENST00000639755 DCAF8L2P0C7V8 631 aa38.79■■■■□ 3.8
AP000550.4-202ENST00000639755 DNAJC5BQ9UF47 199 aa38.69■■■■□ 3.78
AP000550.4-202ENST00000639755 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.77
AP000550.4-202ENST00000639755 UNC13AQ9UPW8 1703 aa38.49■■■■□ 3.75
AP000550.4-202ENST00000639755 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
AP000550.4-202ENST00000639755 BICRAQ9NZM4 1560 aa38.21■■■■□ 3.71
AP000550.4-202ENST00000639755 ZCCHC6Q5VYS8 1495 aaKnown RBP38.2■■■■□ 3.71
AP000550.4-202ENST00000639755 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
AP000550.4-202ENST00000639755 SHROOM4Q9ULL8 1493 aa37.78■■■■□ 3.64
AP000550.4-202ENST00000639755 SCRIBQ14160 1630 aa37.64■■■■□ 3.62
AP000550.4-202ENST00000639755 CC2D2AQ9P2K1 1620 aa37.34■■■■□ 3.57
AP000550.4-202ENST00000639755 EIF4G1Q04637 1599 aaKnown RBP37.28■■■■□ 3.56
AP000550.4-202ENST00000639755 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
AP000550.4-202ENST00000639755 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
AP000550.4-202ENST00000639755 ATAD2BQ9ULI0 1458 aa35.97■■■■□ 3.35
AP000550.4-202ENST00000639755 SMARCA4P51532 1647 aa35.95■■■■□ 3.35
AP000550.4-202ENST00000639755 SMARCA2P51531 1590 aa35.92■■■■□ 3.34
AP000550.4-202ENST00000639755 HMGXB3Q12766 1538 aa35.86■■■■□ 3.33
AP000550.4-202ENST00000639755 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
AP000550.4-202ENST00000639755 ERCC6Q03468 1493 aa35.68■■■■□ 3.3
AP000550.4-202ENST00000639755 CUX2O14529 1486 aa35.67■■■■□ 3.3
AP000550.4-202ENST00000639755 PEG3Q9GZU2 1588 aa35.64■■■■□ 3.3
AP000550.4-202ENST00000639755 BAZ1BQ9UIG0 1483 aaKnown RBP35.63■■■■□ 3.29
AP000550.4-202ENST00000639755 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
AP000550.4-202ENST00000639755 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
AP000550.4-202ENST00000639755 NESP48681 1621 aa35.46■■■■□ 3.27
AP000550.4-202ENST00000639755 LAMC3Q9Y6N6 1575 aa35.32■■■■□ 3.24
AP000550.4-202ENST00000639755 THOC2Q8NI27 1593 aaKnown RBP35.17■■■■□ 3.22
AP000550.4-202ENST00000639755 PDS5BQ9NTI5 1447 aa35.09■■■■□ 3.21
AP000550.4-202ENST00000639755 KIF21AQ7Z4S6 1674 aa35.07■■■■□ 3.2
AP000550.4-202ENST00000639755 WIZO95785 1651 aa35.05■■■■□ 3.2
AP000550.4-202ENST00000639755 CADPSQ9ULU8 1353 aa34.99■■■■□ 3.19
AP000550.4-202ENST00000639755 MRC2Q9UBG0 1479 aa34.78■■■■□ 3.16
AP000550.4-202ENST00000639755 RSF1Q96T23 1441 aaPredicted RBP34.74■■■■□ 3.15
AP000550.4-202ENST00000639755 WDR62O43379 1518 aa34.7■■■■□ 3.14
AP000550.4-202ENST00000639755 TOP2AP11388 1531 aaKnown RBP34.65■■■■□ 3.14
AP000550.4-202ENST00000639755 CEP164Q9UPV0 1460 aa34.65■■■■□ 3.14
AP000550.4-202ENST00000639755 CFTRP13569 1480 aa34.59■■■■□ 3.13
AP000550.4-202ENST00000639755 FANCD2Q9BXW9 1451 aa34.58■■■■□ 3.13
AP000550.4-202ENST00000639755 PRDM2Q13029 1718 aa34.32■■■■□ 3.08
AP000550.4-202ENST00000639755 URB2Q14146 1524 aaKnown RBP34.29■■■■□ 3.08
AP000550.4-202ENST00000639755 CCDC88BA6NC98 1476 aa34.22■■■■□ 3.07
AP000550.4-202ENST00000639755 OSCARQ8IYS5 282 aa33.99■■■■□ 3.03
AP000550.4-202ENST00000639755 TRIM41Q8WV44 630 aa33.98■■■■□ 3.03
AP000550.4-202ENST00000639755 IFT140Q96RY7 1462 aa33.95■■■■□ 3.03
AP000550.4-202ENST00000639755 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
AP000550.4-202ENST00000639755 ABCC8Q09428 1581 aa33.92■■■■□ 3.02
AP000550.4-202ENST00000639755 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
AP000550.4-202ENST00000639755 DNMBPQ6XZF7 1577 aa33.84■■■■□ 3.01
AP000550.4-202ENST00000639755 EIF4G3O43432 1585 aaKnown RBP33.7■■■□□ 2.99
AP000550.4-202ENST00000639755 TARBP1Q13395 1621 aaKnown RBP33.65■■■□□ 2.98
AP000550.4-202ENST00000639755 POLA1P09884 1462 aaPredicted RBP33.58■■■□□ 2.97
AP000550.4-202ENST00000639755 RIMBP3CA6NJZ7 1639 aa33.57■■■□□ 2.96
AP000550.4-202ENST00000639755 RIMBP3BA6NNM3 1639 aa33.57■■■□□ 2.96
AP000550.4-202ENST00000639755 RIMBP3Q9UFD9 1639 aa33.57■■■□□ 2.96
AP000550.4-202ENST00000639755 AQRO60306 1485 aaKnown RBP eCLIP33.53■■■□□ 2.96
AP000550.4-202ENST00000639755 CHD1O14646 1710 aa33.46■■■□□ 2.95
AP000550.4-202ENST00000639755 ARHGEF11O15085 1522 aa33.46■■■□□ 2.95
AP000550.4-202ENST00000639755 SOGA1O94964 1423 aa33.43■■■□□ 2.94
AP000550.4-202ENST00000639755 RAD54L2Q9Y4B4 1467 aa33.42■■■□□ 2.94
AP000550.4-202ENST00000639755 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
AP000550.4-202ENST00000639755 FGD5Q6ZNL6 1462 aa33.37■■■□□ 2.93
AP000550.4-202ENST00000639755 CUX1P39880 1505 aa33.34■■■□□ 2.93
AP000550.4-202ENST00000639755 TDRD9Q8NDG6 1382 aaKnown RBP33.33■■■□□ 2.93
AP000550.4-202ENST00000639755 FBLN2P98095 1184 aa33.3■■■□□ 2.92
AP000550.4-202ENST00000639755 SNAPC4Q5SXM2 1469 aa33.22■■■□□ 2.91
AP000550.4-202ENST00000639755 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
AP000550.4-202ENST00000639755 CYB5RLQ6IPT4 315 aa33.16■■■□□ 2.9
AP000550.4-202ENST00000639755 GRIN2BQ13224 1484 aa33.16■■■□□ 2.9
AP000550.4-202ENST00000639755 SUPT5HO00267 1087 aaKnown RBP33.14■■■□□ 2.9
AP000550.4-202ENST00000639755 ARAP1Q96P48 1450 aa33.12■■■□□ 2.89
AP000550.4-202ENST00000639755 CHMP7Q8WUX9 453 aaPredicted RBP33.09■■■□□ 2.89
AP000550.4-202ENST00000639755 SYNJ1O43426 1573 aa33.08■■■□□ 2.89
AP000550.4-202ENST00000639755 CLASP1Q7Z460 1538 aa33.07■■■□□ 2.89
AP000550.4-202ENST00000639755 SYNJ2O15056 1496 aa33.05■■■□□ 2.88
AP000550.4-202ENST00000639755 PBRM1Q86U86 1689 aa33.04■■■□□ 2.88
AP000550.4-202ENST00000639755 GAPVD1Q14C86 1478 aa33.04■■■□□ 2.88
AP000550.4-202ENST00000639755 ABCA10Q8WWZ4 1543 aa33.02■■■□□ 2.88
AP000550.4-202ENST00000639755 ABCA5Q8WWZ7 1642 aa32.98■■■□□ 2.87
AP000550.4-202ENST00000639755 WRNQ14191 1432 aaPredicted RBP eCLIP32.88■■■□□ 2.85
AP000550.4-202ENST00000639755 BIVM-ERCC5R4GMW8 1640 aa32.86■■■□□ 2.85
AP000550.4-202ENST00000639755 TOP2BQ02880 1626 aa32.84■■■□□ 2.85
AP000550.4-202ENST00000639755 TRHP20396 242 aaPredicted RBP32.79■■■□□ 2.84
AP000550.4-202ENST00000639755 GRIN2AQ12879 1464 aa32.73■■■□□ 2.83
AP000550.4-202ENST00000639755 ADAMTS12P58397 1594 aa32.72■■■□□ 2.83
AP000550.4-202ENST00000639755 ERICH3Q5RHP9 1530 aa32.62■■■□□ 2.81
AP000550.4-202ENST00000639755 FHAD1B1AJZ9 1412 aa32.62■■■□□ 2.81
AP000550.4-202ENST00000639755 NUP160Q12769 1436 aa32.62■■■□□ 2.81
AP000550.4-202ENST00000639755 CEP170Q5SW79 1584 aa32.6■■■□□ 2.81
AP000550.4-202ENST00000639755 ERCC6L2Q5T890 1561 aa32.5■■■□□ 2.79
AP000550.4-202ENST00000639755 SHROOM2Q13796 1616 aa32.5■■■□□ 2.79
AP000550.4-202ENST00000639755 PRG4Q92954 1404 aaPredicted RBP32.27■■■□□ 2.76
AP000550.4-202ENST00000639755 JPH4Q96JJ6 628 aa32.26■■■□□ 2.75
AP000550.4-202ENST00000639755 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.75
AP000550.4-202ENST00000639755 KIF27Q86VH2 1401 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms