RNA–Protein interactions for RNA: ENST00000226317.9

CXCL6-201, Transcript of C-X-C motif chemokine ligand 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL6, Length 1,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL6-201ENST00000226317 NISCHQ9Y2I1 1504 aa38.39■■■■□ 3.74
CXCL6-201ENST00000226317 CCDC180Q9P1Z9 1646 aa33.84■■■■□ 3.01
CXCL6-201ENST00000226317 ABCC9O60706 1549 aa33.03■■■□□ 2.88
CXCL6-201ENST00000226317 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
CXCL6-201ENST00000226317 ZCCHC6Q5VYS8 1495 aaKnown RBP32.01■■■□□ 2.71
CXCL6-201ENST00000226317 NACADO15069 1562 aa31.86■■■□□ 2.69
CXCL6-201ENST00000226317 RB1CC1Q8TDY2 1594 aa31.83■■■□□ 2.69
CXCL6-201ENST00000226317 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
CXCL6-201ENST00000226317 DCAF1Q9Y4B6 1507 aa31.73■■■□□ 2.67
CXCL6-201ENST00000226317 PABPN1Q86U42 306 aaKnown RBP eCLIP31.04■■■□□ 2.56
CXCL6-201ENST00000226317 SCRIBQ14160 1630 aa31.03■■■□□ 2.56
CXCL6-201ENST00000226317 UNC13AQ9UPW8 1703 aa30.92■■■□□ 2.54
CXCL6-201ENST00000226317 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
CXCL6-201ENST00000226317 SHROOM4Q9ULL8 1493 aa30.67■■■□□ 2.5
CXCL6-201ENST00000226317 DNAJC5BQ9UF47 199 aa30.09■■■□□ 2.41
CXCL6-201ENST00000226317 EIF4G1Q04637 1599 aaKnown RBP30.01■■■□□ 2.39
CXCL6-201ENST00000226317 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
CXCL6-201ENST00000226317 CC2D2AQ9P2K1 1620 aa29.8■■■□□ 2.36
CXCL6-201ENST00000226317 BAZ1AQ9NRL2 1556 aaPredicted RBP29.73■■■□□ 2.35
CXCL6-201ENST00000226317 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
CXCL6-201ENST00000226317 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
CXCL6-201ENST00000226317 ATAD2BQ9ULI0 1458 aa29.51■■■□□ 2.31
CXCL6-201ENST00000226317 SMARCA2P51531 1590 aa29.46■■■□□ 2.31
CXCL6-201ENST00000226317 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
CXCL6-201ENST00000226317 RSF1Q96T23 1441 aaPredicted RBP29.42■■■□□ 2.3
CXCL6-201ENST00000226317 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
CXCL6-201ENST00000226317 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
CXCL6-201ENST00000226317 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
CXCL6-201ENST00000226317 WIZO95785 1651 aa29.25■■■□□ 2.27
CXCL6-201ENST00000226317 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
CXCL6-201ENST00000226317 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
CXCL6-201ENST00000226317 CCDC88BA6NC98 1476 aa28.71■■■□□ 2.19
CXCL6-201ENST00000226317 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
CXCL6-201ENST00000226317 NESP48681 1621 aa28.64■■■□□ 2.18
CXCL6-201ENST00000226317 LAMC3Q9Y6N6 1575 aa28.56■■■□□ 2.16
CXCL6-201ENST00000226317 CFTRP13569 1480 aa28.5■■■□□ 2.15
CXCL6-201ENST00000226317 PDS5BQ9NTI5 1447 aa28.48■■■□□ 2.15
CXCL6-201ENST00000226317 ERCC6Q03468 1493 aa28.48■■■□□ 2.15
CXCL6-201ENST00000226317 FANCD2Q9BXW9 1451 aa28.3■■■□□ 2.12
CXCL6-201ENST00000226317 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
CXCL6-201ENST00000226317 KIF21AQ7Z4S6 1674 aa28.18■■■□□ 2.1
CXCL6-201ENST00000226317 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
CXCL6-201ENST00000226317 PRDM2Q13029 1718 aa28.07■■■□□ 2.08
CXCL6-201ENST00000226317 THOC2Q8NI27 1593 aaKnown RBP28.01■■■□□ 2.08
CXCL6-201ENST00000226317 CUX2O14529 1486 aa27.98■■■□□ 2.07
CXCL6-201ENST00000226317 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
CXCL6-201ENST00000226317 WDR62O43379 1518 aa27.93■■■□□ 2.06
CXCL6-201ENST00000226317 ABCC8Q09428 1581 aa27.89■■■□□ 2.06
CXCL6-201ENST00000226317 TOPBP1Q92547 1522 aa27.85■■■□□ 2.05
CXCL6-201ENST00000226317 DNMBPQ6XZF7 1577 aa27.8■■■□□ 2.04
CXCL6-201ENST00000226317 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
CXCL6-201ENST00000226317 CUX1P39880 1505 aa27.73■■■□□ 2.03
CXCL6-201ENST00000226317 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.02
CXCL6-201ENST00000226317 FGD5Q6ZNL6 1462 aa27.62■■■□□ 2.01
CXCL6-201ENST00000226317 IFT140Q96RY7 1462 aa27.62■■■□□ 2.01
CXCL6-201ENST00000226317 SOGA1O94964 1423 aa27.62■■■□□ 2.01
CXCL6-201ENST00000226317 SYNJ1O43426 1573 aa27.56■■■□□ 2
CXCL6-201ENST00000226317 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
CXCL6-201ENST00000226317 TOP2BQ02880 1626 aa27.55■■■□□ 2
CXCL6-201ENST00000226317 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
CXCL6-201ENST00000226317 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
CXCL6-201ENST00000226317 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
CXCL6-201ENST00000226317 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
CXCL6-201ENST00000226317 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
CXCL6-201ENST00000226317 AQRO60306 1485 aaKnown RBP eCLIP27.41■■□□□ 1.98
CXCL6-201ENST00000226317 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
CXCL6-201ENST00000226317 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
CXCL6-201ENST00000226317 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
CXCL6-201ENST00000226317 GAPVD1Q14C86 1478 aa27.26■■□□□ 1.95
CXCL6-201ENST00000226317 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
CXCL6-201ENST00000226317 GRIN2BQ13224 1484 aa27.2■■□□□ 1.94
CXCL6-201ENST00000226317 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
CXCL6-201ENST00000226317 FBLN2P98095 1184 aa27.16■■□□□ 1.94
CXCL6-201ENST00000226317 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
CXCL6-201ENST00000226317 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
CXCL6-201ENST00000226317 SNAPC4Q5SXM2 1469 aa27.1■■□□□ 1.93
CXCL6-201ENST00000226317 MAGI1Q96QZ7 1491 aaPredicted RBP27.07■■□□□ 1.92
CXCL6-201ENST00000226317 OSCARQ8IYS5 282 aa27.05■■□□□ 1.92
CXCL6-201ENST00000226317 IGF1RP08069 1367 aa27.04■■□□□ 1.92
CXCL6-201ENST00000226317 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
CXCL6-201ENST00000226317 PBRM1Q86U86 1689 aa27■■□□□ 1.91
CXCL6-201ENST00000226317 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
CXCL6-201ENST00000226317 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
CXCL6-201ENST00000226317 FHAD1B1AJZ9 1412 aa26.96■■□□□ 1.91
CXCL6-201ENST00000226317 FAM9AQ8IZU1 332 aaPredicted RBP26.9■■□□□ 1.9
CXCL6-201ENST00000226317 CARMIL1Q5VZK9 1371 aa26.89■■□□□ 1.9
CXCL6-201ENST00000226317 DNAJC5Q9H3Z4 198 aa26.88■■□□□ 1.89
CXCL6-201ENST00000226317 CSRNP3Q8WYN3 585 aa26.87■■□□□ 1.89
CXCL6-201ENST00000226317 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
CXCL6-201ENST00000226317 EEA1Q15075 1411 aa26.83■■□□□ 1.89
CXCL6-201ENST00000226317 GRIN2AQ12879 1464 aa26.83■■□□□ 1.89
CXCL6-201ENST00000226317 CHD1O14646 1710 aa26.82■■□□□ 1.88
CXCL6-201ENST00000226317 CUL7Q14999 1698 aa26.78■■□□□ 1.88
CXCL6-201ENST00000226317 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
CXCL6-201ENST00000226317 NUP160Q12769 1436 aa26.68■■□□□ 1.86
CXCL6-201ENST00000226317 PRXQ9BXM0 1461 aa26.67■■□□□ 1.86
CXCL6-201ENST00000226317 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
CXCL6-201ENST00000226317 CLASP1Q7Z460 1538 aa26.59■■□□□ 1.85
CXCL6-201ENST00000226317 JPH4Q96JJ6 628 aa26.57■■□□□ 1.84
CXCL6-201ENST00000226317 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms