RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 NISCHQ9Y2I1 1504 aa38.97■■■■□ 3.83
PFN1-203ENST00000574872 CCDC180Q9P1Z9 1646 aa34.47■■■■□ 3.11
PFN1-203ENST00000574872 ABCC9O60706 1549 aa33.59■■■□□ 2.97
PFN1-203ENST00000574872 DCAF8L2P0C7V8 631 aa32.57■■■□□ 2.8
PFN1-203ENST00000574872 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
PFN1-203ENST00000574872 NACADO15069 1562 aa32.36■■■□□ 2.77
PFN1-203ENST00000574872 RB1CC1Q8TDY2 1594 aa32.34■■■□□ 2.77
PFN1-203ENST00000574872 MYO15BQ96JP2 1530 aa32.2■■■□□ 2.74
PFN1-203ENST00000574872 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
PFN1-203ENST00000574872 UNC13AQ9UPW8 1703 aa31.62■■■□□ 2.65
PFN1-203ENST00000574872 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
PFN1-203ENST00000574872 PABPN1Q86U42 306 aaKnown RBP eCLIP31.47■■■□□ 2.632e-20■■■■□ 21.4
PFN1-203ENST00000574872 BICRAQ9NZM4 1560 aa31.38■■■□□ 2.61
PFN1-203ENST00000574872 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
PFN1-203ENST00000574872 DNAJC5BQ9UF47 199 aa30.58■■■□□ 2.49
PFN1-203ENST00000574872 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
PFN1-203ENST00000574872 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
PFN1-203ENST00000574872 CC2D2AQ9P2K1 1620 aa30.35■■■□□ 2.45
PFN1-203ENST00000574872 SMARCA4P51532 1647 aa30.19■■■□□ 2.42
PFN1-203ENST00000574872 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
PFN1-203ENST00000574872 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
PFN1-203ENST00000574872 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
PFN1-203ENST00000574872 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
PFN1-203ENST00000574872 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
PFN1-203ENST00000574872 PEG3Q9GZU2 1588 aa29.83■■■□□ 2.37
PFN1-203ENST00000574872 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
PFN1-203ENST00000574872 WIZO95785 1651 aa29.76■■■□□ 2.36
PFN1-203ENST00000574872 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
PFN1-203ENST00000574872 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
PFN1-203ENST00000574872 TOP2AP11388 1531 aaKnown RBP29.44■■■□□ 2.3
PFN1-203ENST00000574872 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
PFN1-203ENST00000574872 NESP48681 1621 aa29.15■■■□□ 2.26
PFN1-203ENST00000574872 CCDC88BA6NC98 1476 aa29.11■■■□□ 2.25
PFN1-203ENST00000574872 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
PFN1-203ENST00000574872 LAMC3Q9Y6N6 1575 aa29.02■■■□□ 2.24
PFN1-203ENST00000574872 ERCC6Q03468 1493 aa28.92■■■□□ 2.22
PFN1-203ENST00000574872 CFTRP13569 1480 aa28.91■■■□□ 2.22
PFN1-203ENST00000574872 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
PFN1-203ENST00000574872 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
PFN1-203ENST00000574872 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
PFN1-203ENST00000574872 PRDM2Q13029 1718 aa28.68■■■□□ 2.18
PFN1-203ENST00000574872 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
PFN1-203ENST00000574872 THOC2Q8NI27 1593 aaKnown RBP28.59■■■□□ 2.17
PFN1-203ENST00000574872 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
PFN1-203ENST00000574872 CUX2O14529 1486 aa28.45■■■□□ 2.14
PFN1-203ENST00000574872 WDR62O43379 1518 aa28.43■■■□□ 2.14
PFN1-203ENST00000574872 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
PFN1-203ENST00000574872 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
PFN1-203ENST00000574872 DNMBPQ6XZF7 1577 aa28.27■■■□□ 2.12
PFN1-203ENST00000574872 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
PFN1-203ENST00000574872 CUX1P39880 1505 aa28.19■■■□□ 2.1
PFN1-203ENST00000574872 WRNQ14191 1432 aaPredicted RBP eCLIP28.11■■■□□ 2.09
PFN1-203ENST00000574872 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
PFN1-203ENST00000574872 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
PFN1-203ENST00000574872 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
PFN1-203ENST00000574872 IFT140Q96RY7 1462 aa28.03■■■□□ 2.08
PFN1-203ENST00000574872 RAD54L2Q9Y4B4 1467 aa27.99■■■□□ 2.07
PFN1-203ENST00000574872 TOP2BQ02880 1626 aa27.99■■■□□ 2.07
PFN1-203ENST00000574872 BIVM-ERCC5R4GMW8 1640 aa27.97■■■□□ 2.07
PFN1-203ENST00000574872 SOGA1O94964 1423 aa27.96■■■□□ 2.07
PFN1-203ENST00000574872 TARBP1Q13395 1621 aaKnown RBP27.94■■■□□ 2.06
PFN1-203ENST00000574872 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
PFN1-203ENST00000574872 TDRD9Q8NDG6 1382 aaKnown RBP27.81■■■□□ 2.04
PFN1-203ENST00000574872 AQRO60306 1485 aaKnown RBP eCLIP27.81■■■□□ 2.045e-12■■■■■ 46.4
PFN1-203ENST00000574872 EIF4G3O43432 1585 aaKnown RBP27.81■■■□□ 2.04
PFN1-203ENST00000574872 WDR97A6NE52 1622 aa27.78■■■□□ 2.04
PFN1-203ENST00000574872 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
PFN1-203ENST00000574872 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
PFN1-203ENST00000574872 GAPVD1Q14C86 1478 aa27.64■■■□□ 2.02
PFN1-203ENST00000574872 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.02
PFN1-203ENST00000574872 GRIN2BQ13224 1484 aa27.59■■■□□ 2.01
PFN1-203ENST00000574872 SNAPC4Q5SXM2 1469 aa27.56■■■□□ 2
PFN1-203ENST00000574872 PBRM1Q86U86 1689 aa27.56■■■□□ 2
PFN1-203ENST00000574872 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
PFN1-203ENST00000574872 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
PFN1-203ENST00000574872 MAGI1Q96QZ7 1491 aaPredicted RBP27.47■■□□□ 1.99
PFN1-203ENST00000574872 FBLN2P98095 1184 aa27.46■■□□□ 1.99
PFN1-203ENST00000574872 ERICH3Q5RHP9 1530 aa27.42■■□□□ 1.98
PFN1-203ENST00000574872 CHD1O14646 1710 aa27.4■■□□□ 1.98
PFN1-203ENST00000574872 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
PFN1-203ENST00000574872 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
PFN1-203ENST00000574872 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
PFN1-203ENST00000574872 ADAMTS12P58397 1594 aa27.37■■□□□ 1.97
PFN1-203ENST00000574872 IGF1RP08069 1367 aa27.35■■□□□ 1.97
PFN1-203ENST00000574872 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
PFN1-203ENST00000574872 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
PFN1-203ENST00000574872 DNAJC5Q9H3Z4 198 aa27.26■■□□□ 1.95
PFN1-203ENST00000574872 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
PFN1-203ENST00000574872 CUL7Q14999 1698 aa27.23■■□□□ 1.95
PFN1-203ENST00000574872 CARMIL1Q5VZK9 1371 aa27.2■■□□□ 1.94
PFN1-203ENST00000574872 FAM9AQ8IZU1 332 aaPredicted RBP27.17■■□□□ 1.94
PFN1-203ENST00000574872 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
PFN1-203ENST00000574872 EEA1Q15075 1411 aa27.1■■□□□ 1.93
PFN1-203ENST00000574872 NUP160Q12769 1436 aa27.09■■□□□ 1.93
PFN1-203ENST00000574872 CLASP1Q7Z460 1538 aa27.09■■□□□ 1.93
PFN1-203ENST00000574872 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
PFN1-203ENST00000574872 RAPGEF2Q9Y4G8 1499 aa27.06■■□□□ 1.92
PFN1-203ENST00000574872 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
PFN1-203ENST00000574872 ARHGEF11O15085 1522 aa26.92■■□□□ 1.9
PFN1-203ENST00000574872 KIAA0586Q9BVV6 1533 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms