Protein–RNA interactions for Protein: O43272

PRODH, Proline dehydrogenase 1, mitochondrial, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRODHO43272 INE2-201ENST00000630399 1874 ntBASIC13.59□□□□□ -0.23
PRODHO43272 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.59□□□□□ -0.23
PRODHO43272 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.59□□□□□ -0.23
PRODHO43272 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.59□□□□□ -0.23
PRODHO43272 CNN2P11-201ENST00000429351 262 ntBASIC13.59□□□□□ -0.23
PRODHO43272 AP006288.1-201ENST00000446065 395 ntBASIC13.59□□□□□ -0.23
PRODHO43272 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.59□□□□□ -0.23
PRODHO43272 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PRODHO43272 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.59□□□□□ -0.23
PRODHO43272 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.59□□□□□ -0.23
PRODHO43272 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.59□□□□□ -0.23
PRODHO43272 AC073592.8-201ENST00000624126 511 ntBASIC13.59□□□□□ -0.23
PRODHO43272 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.59□□□□□ -0.23
PRODHO43272 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PRODHO43272 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.59□□□□□ -0.23
PRODHO43272 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PRODHO43272 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.59□□□□□ -0.23
PRODHO43272 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRODHO43272 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PRODHO43272 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
PRODHO43272 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PRODHO43272 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRODHO43272 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRODHO43272 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.58□□□□□ -0.23
PRODHO43272 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRODHO43272 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRODHO43272 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.58□□□□□ -0.24
PRODHO43272 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.58□□□□□ -0.24
PRODHO43272 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.58□□□□□ -0.24
PRODHO43272 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 HLA-J-203ENST00000494367 1087 ntBASIC13.58□□□□□ -0.24
PRODHO43272 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
PRODHO43272 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.58□□□□□ -0.24
PRODHO43272 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.58□□□□□ -0.24
PRODHO43272 TIMM17BP1-201ENST00000545713 516 ntBASIC13.58□□□□□ -0.24
PRODHO43272 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.58□□□□□ -0.24
PRODHO43272 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.58□□□□□ -0.24
PRODHO43272 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.58□□□□□ -0.24
PRODHO43272 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PRODHO43272 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.58□□□□□ -0.24
PRODHO43272 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 AC087499.5-201ENST00000452760 1342 ntBASIC13.58□□□□□ -0.24
PRODHO43272 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PRODHO43272 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.58□□□□□ -0.24
PRODHO43272 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.58□□□□□ -0.24
PRODHO43272 KRT8P24-201ENST00000560290 1559 ntBASIC13.58□□□□□ -0.24
PRODHO43272 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRODHO43272 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms