RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
TRIM13-201ENST00000356017 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
TRIM13-201ENST00000356017 ABCC9O60706 1549 aa31.55■■■□□ 2.64
TRIM13-201ENST00000356017 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
TRIM13-201ENST00000356017 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
TRIM13-201ENST00000356017 NACADO15069 1562 aa30.61■■■□□ 2.49
TRIM13-201ENST00000356017 MYO15BQ96JP2 1530 aa30.59■■■□□ 2.49
TRIM13-201ENST00000356017 DCAF1Q9Y4B6 1507 aa30.59■■■□□ 2.49
TRIM13-201ENST00000356017 RB1CC1Q8TDY2 1594 aa30.55■■■□□ 2.48
TRIM13-201ENST00000356017 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
TRIM13-201ENST00000356017 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
TRIM13-201ENST00000356017 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.32
TRIM13-201ENST00000356017 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
TRIM13-201ENST00000356017 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
TRIM13-201ENST00000356017 EIF4G1Q04637 1599 aaKnown RBP28.77■■■□□ 2.2
TRIM13-201ENST00000356017 CECR2Q9BXF3 1484 aa28.68■■■□□ 2.18
TRIM13-201ENST00000356017 BAZ1AQ9NRL2 1556 aaPredicted RBP28.6■■■□□ 2.17
TRIM13-201ENST00000356017 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
TRIM13-201ENST00000356017 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
TRIM13-201ENST00000356017 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
TRIM13-201ENST00000356017 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
TRIM13-201ENST00000356017 SMARCA2P51531 1590 aa28.31■■■□□ 2.12
TRIM13-201ENST00000356017 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
TRIM13-201ENST00000356017 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
TRIM13-201ENST00000356017 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
TRIM13-201ENST00000356017 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
TRIM13-201ENST00000356017 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
TRIM13-201ENST00000356017 BAZ1BQ9UIG0 1483 aaKnown RBP28.11■■■□□ 2.09
TRIM13-201ENST00000356017 WIZO95785 1651 aa28.11■■■□□ 2.09
TRIM13-201ENST00000356017 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.06
TRIM13-201ENST00000356017 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
TRIM13-201ENST00000356017 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
TRIM13-201ENST00000356017 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
TRIM13-201ENST00000356017 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
TRIM13-201ENST00000356017 NESP48681 1621 aa27.39■■□□□ 1.98
TRIM13-201ENST00000356017 CFTRP13569 1480 aa27.37■■□□□ 1.97
TRIM13-201ENST00000356017 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
TRIM13-201ENST00000356017 ERCC6Q03468 1493 aa27.2■■□□□ 1.95
TRIM13-201ENST00000356017 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
TRIM13-201ENST00000356017 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
TRIM13-201ENST00000356017 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
TRIM13-201ENST00000356017 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
TRIM13-201ENST00000356017 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
TRIM13-201ENST00000356017 THOC2Q8NI27 1593 aaKnown RBP26.87■■□□□ 1.89
TRIM13-201ENST00000356017 WDR62O43379 1518 aa26.81■■□□□ 1.88
TRIM13-201ENST00000356017 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
TRIM13-201ENST00000356017 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
TRIM13-201ENST00000356017 CUX2O14529 1486 aa26.77■■□□□ 1.88
TRIM13-201ENST00000356017 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
TRIM13-201ENST00000356017 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
TRIM13-201ENST00000356017 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
TRIM13-201ENST00000356017 CUX1P39880 1505 aa26.64■■□□□ 1.86
TRIM13-201ENST00000356017 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
TRIM13-201ENST00000356017 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
TRIM13-201ENST00000356017 SYNJ1O43426 1573 aa26.52■■□□□ 1.84
TRIM13-201ENST00000356017 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
TRIM13-201ENST00000356017 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
TRIM13-201ENST00000356017 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
TRIM13-201ENST00000356017 SOGA1O94964 1423 aa26.46■■□□□ 1.83
TRIM13-201ENST00000356017 RAD54L2Q9Y4B4 1467 aa26.39■■□□□ 1.82
TRIM13-201ENST00000356017 TARBP1Q13395 1621 aaKnown RBP26.37■■□□□ 1.81
TRIM13-201ENST00000356017 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
TRIM13-201ENST00000356017 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
TRIM13-201ENST00000356017 ZNF608Q9ULD9 1512 aaPredicted RBP26.28■■□□□ 1.8
TRIM13-201ENST00000356017 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
TRIM13-201ENST00000356017 TDRD9Q8NDG6 1382 aaKnown RBP26.24■■□□□ 1.79
TRIM13-201ENST00000356017 WDR97A6NE52 1622 aa26.24■■□□□ 1.79
TRIM13-201ENST00000356017 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.796e-15■■■■■ 98.7
TRIM13-201ENST00000356017 EIF4G3O43432 1585 aaKnown RBP26.18■■□□□ 1.78
TRIM13-201ENST00000356017 GAPVD1Q14C86 1478 aa26.15■■□□□ 1.78
TRIM13-201ENST00000356017 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
TRIM13-201ENST00000356017 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
TRIM13-201ENST00000356017 GRIN2BQ13224 1484 aa26.1■■□□□ 1.77
TRIM13-201ENST00000356017 ERICH3Q5RHP9 1530 aa26■■□□□ 1.75
TRIM13-201ENST00000356017 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
TRIM13-201ENST00000356017 PBRM1Q86U86 1689 aa25.98■■□□□ 1.75
TRIM13-201ENST00000356017 SNAPC4Q5SXM2 1469 aa25.97■■□□□ 1.75
TRIM13-201ENST00000356017 IGF1RP08069 1367 aa25.94■■□□□ 1.74
TRIM13-201ENST00000356017 RUSC2Q8N2Y8 1516 aa25.91■■□□□ 1.74
TRIM13-201ENST00000356017 EEA1Q15075 1411 aa25.89■■□□□ 1.74
TRIM13-201ENST00000356017 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
TRIM13-201ENST00000356017 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
TRIM13-201ENST00000356017 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
TRIM13-201ENST00000356017 FBLN2P98095 1184 aa25.87■■□□□ 1.73
TRIM13-201ENST00000356017 ADAMTS12P58397 1594 aa25.83■■□□□ 1.72
TRIM13-201ENST00000356017 CUL7Q14999 1698 aa25.81■■□□□ 1.72
TRIM13-201ENST00000356017 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
TRIM13-201ENST00000356017 CSRNP3Q8WYN3 585 aa25.8■■□□□ 1.72
TRIM13-201ENST00000356017 OSCARQ8IYS5 282 aa25.79■■□□□ 1.72
TRIM13-201ENST00000356017 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
TRIM13-201ENST00000356017 CHD1O14646 1710 aa25.74■■□□□ 1.71
TRIM13-201ENST00000356017 GRIN2AQ12879 1464 aa25.74■■□□□ 1.71
TRIM13-201ENST00000356017 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
TRIM13-201ENST00000356017 PRXQ9BXM0 1461 aa25.68■■□□□ 1.7
TRIM13-201ENST00000356017 NUP160Q12769 1436 aa25.62■■□□□ 1.69
TRIM13-201ENST00000356017 CEP170Q5SW79 1584 aa25.55■■□□□ 1.68
TRIM13-201ENST00000356017 CLASP1Q7Z460 1538 aa25.52■■□□□ 1.68
TRIM13-201ENST00000356017 KIF21BO75037 1637 aa25.51■■□□□ 1.67
TRIM13-201ENST00000356017 DNAJC5Q9H3Z4 198 aa25.51■■□□□ 1.67
TRIM13-201ENST00000356017 KIAA0586Q9BVV6 1533 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms