RNA–Protein interactions for RNA: ENST00000329608.10

CSF1-201, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-201ENST00000329608 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
CSF1-201ENST00000329608 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
CSF1-201ENST00000329608 DCAF8L2P0C7V8 631 aa26.08■■□□□ 1.77
CSF1-201ENST00000329608 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
CSF1-201ENST00000329608 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
CSF1-201ENST00000329608 ZCCHC6Q5VYS8 1495 aaKnown RBP25.35■■□□□ 1.65
CSF1-201ENST00000329608 CHIC1Q5VXU3 224 aa24.48■■□□□ 1.51
CSF1-201ENST00000329608 ABCC9O60706 1549 aa24.46■■□□□ 1.51
CSF1-201ENST00000329608 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
CSF1-201ENST00000329608 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
CSF1-201ENST00000329608 MYO15BQ96JP2 1530 aa24.12■■□□□ 1.45
CSF1-201ENST00000329608 LOC105371045A0A1W2PR82 267 aa23.98■■□□□ 1.43
CSF1-201ENST00000329608 EHMT2Q96KQ7 1210 aa23.9■■□□□ 1.42
CSF1-201ENST00000329608 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
CSF1-201ENST00000329608 FAM9AQ8IZU1 332 aaPredicted RBP23.87■■□□□ 1.41
CSF1-201ENST00000329608 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
CSF1-201ENST00000329608 PCGF6Q9BYE7 350 aa23.79■■□□□ 1.4
CSF1-201ENST00000329608 NACADO15069 1562 aa23.76■■□□□ 1.39
CSF1-201ENST00000329608 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
CSF1-201ENST00000329608 PABPN1Q86U42 306 aaKnown RBP eCLIP23.58■■□□□ 1.36
CSF1-201ENST00000329608 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
CSF1-201ENST00000329608 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
CSF1-201ENST00000329608 WIZO95785 1651 aa23.32■■□□□ 1.32
CSF1-201ENST00000329608 HRCP23327 699 aa23.3■■□□□ 1.32
CSF1-201ENST00000329608 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
CSF1-201ENST00000329608 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
CSF1-201ENST00000329608 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.29
CSF1-201ENST00000329608 TTBK1Q5TCY1 1321 aaPredicted RBP23.02■■□□□ 1.28
CSF1-201ENST00000329608 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
CSF1-201ENST00000329608 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
CSF1-201ENST00000329608 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
CSF1-201ENST00000329608 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
CSF1-201ENST00000329608 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
CSF1-201ENST00000329608 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
CSF1-201ENST00000329608 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
CSF1-201ENST00000329608 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
CSF1-201ENST00000329608 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
CSF1-201ENST00000329608 SOGA1O94964 1423 aa22.68■■□□□ 1.22
CSF1-201ENST00000329608 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
CSF1-201ENST00000329608 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
CSF1-201ENST00000329608 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
CSF1-201ENST00000329608 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
CSF1-201ENST00000329608 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
CSF1-201ENST00000329608 EIF4G1Q04637 1599 aaKnown RBP22.53■■□□□ 1.2
CSF1-201ENST00000329608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
CSF1-201ENST00000329608 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
CSF1-201ENST00000329608 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
CSF1-201ENST00000329608 CEP162Q5TB80 1403 aa22.44■■□□□ 1.18
CSF1-201ENST00000329608 TNIKQ9UKE5 1360 aa22.33■■□□□ 1.17
CSF1-201ENST00000329608 APLP2Q06481 763 aa22.33■■□□□ 1.17
CSF1-201ENST00000329608 EEA1Q15075 1411 aa22.32■■□□□ 1.16
CSF1-201ENST00000329608 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
CSF1-201ENST00000329608 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
CSF1-201ENST00000329608 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
CSF1-201ENST00000329608 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
CSF1-201ENST00000329608 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
CSF1-201ENST00000329608 CLIP1P30622 1438 aa22.14■■□□□ 1.13
CSF1-201ENST00000329608 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
CSF1-201ENST00000329608 NCAPD3P42695 1498 aa22.08■■□□□ 1.12
CSF1-201ENST00000329608 ATP1B4Q9UN42 357 aaPredicted RBP21.93■■□□□ 1.1
CSF1-201ENST00000329608 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
CSF1-201ENST00000329608 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
CSF1-201ENST00000329608 TOP2BQ02880 1626 aa21.89■■□□□ 1.1
CSF1-201ENST00000329608 VPS8Q8N3P4 1428 aa21.87■■□□□ 1.09
CSF1-201ENST00000329608 ITGAEP38570 1179 aa21.87■■□□□ 1.09
CSF1-201ENST00000329608 CUX1P39880 1505 aa21.86■■□□□ 1.09
CSF1-201ENST00000329608 KIF21BO75037 1637 aa21.86■■□□□ 1.09
CSF1-201ENST00000329608 CFTRP13569 1480 aa21.85■■□□□ 1.09
CSF1-201ENST00000329608 P3H3Q8IVL6 736 aa21.83■■□□□ 1.09
CSF1-201ENST00000329608 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.09
CSF1-201ENST00000329608 CUX2O14529 1486 aa21.8■■□□□ 1.08
CSF1-201ENST00000329608 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
CSF1-201ENST00000329608 DIEXFQ68CQ4 756 aaKnown RBP21.74■■□□□ 1.07
CSF1-201ENST00000329608 PRXQ9BXM0 1461 aa21.71■■□□□ 1.07
CSF1-201ENST00000329608 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
CSF1-201ENST00000329608 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
CSF1-201ENST00000329608 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
CSF1-201ENST00000329608 IGF1RP08069 1367 aa21.64■■□□□ 1.05
CSF1-201ENST00000329608 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
CSF1-201ENST00000329608 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
CSF1-201ENST00000329608 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
CSF1-201ENST00000329608 NESP48681 1621 aa21.61■■□□□ 1.05
CSF1-201ENST00000329608 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
CSF1-201ENST00000329608 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.05
CSF1-201ENST00000329608 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
CSF1-201ENST00000329608 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
CSF1-201ENST00000329608 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
CSF1-201ENST00000329608 YTHDC1Q96MU7 727 aaKnown RBP21.53■■□□□ 1.04
CSF1-201ENST00000329608 ARHGAP35Q9NRY4 1499 aa21.49■■□□□ 1.03
CSF1-201ENST00000329608 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
CSF1-201ENST00000329608 CCNB3Q8WWL7 1395 aa21.39■■□□□ 1.01
CSF1-201ENST00000329608 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
CSF1-201ENST00000329608 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
CSF1-201ENST00000329608 TOPBP1Q92547 1522 aa21.36■■□□□ 1.01
CSF1-201ENST00000329608 CENPBP07199 599 aaPredicted RBP21.36■■□□□ 1.01
CSF1-201ENST00000329608 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
CSF1-201ENST00000329608 ARID3CA6NKF2 412 aa21.35■■□□□ 1.01
CSF1-201ENST00000329608 NEUROD1Q13562 356 aa21.33■■□□□ 1
CSF1-201ENST00000329608 MIER1Q8N108 512 aa21.28■■□□□ 1
CSF1-201ENST00000329608 DHX57Q6P158 1386 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms