RNA–Protein interactions for RNA: ENST00000494367.1

HLA-J-203, Transcript of major histocompatibility complex, class I, J (pseudogene), humanhuman

BASIC

Gene HLA-J, Length 1,087 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-J-203ENST00000494367 NISCHQ9Y2I1 1504 aa40.97■■■■■ 4.15
HLA-J-203ENST00000494367 ABCC9O60706 1549 aa37.92■■■■□ 3.66
HLA-J-203ENST00000494367 CCDC180Q9P1Z9 1646 aa36.75■■■■□ 3.47
HLA-J-203ENST00000494367 DNAJC5BQ9UF47 199 aa36.6■■■■□ 3.45
HLA-J-203ENST00000494367 RB1CC1Q8TDY2 1594 aa35.57■■■■□ 3.28
HLA-J-203ENST00000494367 PABPN1Q86U42 306 aaKnown RBP eCLIP35.06■■■■□ 3.2
HLA-J-203ENST00000494367 NACADO15069 1562 aa35■■■■□ 3.19
HLA-J-203ENST00000494367 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
HLA-J-203ENST00000494367 BICRAQ9NZM4 1560 aa34.55■■■■□ 3.12
HLA-J-203ENST00000494367 DNAJC5Q9H3Z4 198 aa34.55■■■■□ 3.12
HLA-J-203ENST00000494367 DCAF8L2P0C7V8 631 aa34.54■■■■□ 3.12
HLA-J-203ENST00000494367 CECR2Q9BXF3 1484 aa34.28■■■■□ 3.08
HLA-J-203ENST00000494367 MYO15BQ96JP2 1530 aa34.28■■■■□ 3.08
HLA-J-203ENST00000494367 CC2D2AQ9P2K1 1620 aa34.21■■■■□ 3.07
HLA-J-203ENST00000494367 ZCCHC6Q5VYS8 1495 aaKnown RBP33.97■■■■□ 3.03
HLA-J-203ENST00000494367 SHROOM4Q9ULL8 1493 aa33.96■■■■□ 3.03
HLA-J-203ENST00000494367 DCAF1Q9Y4B6 1507 aa33.9■■■■□ 3.02
HLA-J-203ENST00000494367 EIF4G1Q04637 1599 aaKnown RBP33.82■■■■□ 3
HLA-J-203ENST00000494367 SCRIBQ14160 1630 aa33.39■■■□□ 2.94
HLA-J-203ENST00000494367 CUX2O14529 1486 aa33.2■■■□□ 2.91
HLA-J-203ENST00000494367 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
HLA-J-203ENST00000494367 TRIM41Q8WV44 630 aa32.57■■■□□ 2.8
HLA-J-203ENST00000494367 NCAPD3P42695 1498 aa32.29■■■□□ 2.76
HLA-J-203ENST00000494367 NESP48681 1621 aa32.21■■■□□ 2.75
HLA-J-203ENST00000494367 THOC2Q8NI27 1593 aaKnown RBP32.17■■■□□ 2.74
HLA-J-203ENST00000494367 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
HLA-J-203ENST00000494367 HMGXB3Q12766 1538 aa31.98■■■□□ 2.71
HLA-J-203ENST00000494367 SMARCA2P51531 1590 aa31.91■■■□□ 2.7
HLA-J-203ENST00000494367 SMARCA4P51532 1647 aa31.86■■■□□ 2.69
HLA-J-203ENST00000494367 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
HLA-J-203ENST00000494367 LAMC3Q9Y6N6 1575 aa31.82■■■□□ 2.68
HLA-J-203ENST00000494367 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
HLA-J-203ENST00000494367 BAZ1BQ9UIG0 1483 aaKnown RBP31.68■■■□□ 2.66
HLA-J-203ENST00000494367 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
HLA-J-203ENST00000494367 PEG3Q9GZU2 1588 aa31.63■■■□□ 2.65
HLA-J-203ENST00000494367 MROH2BQ7Z745 1585 aa31.54■■■□□ 2.64
HLA-J-203ENST00000494367 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
HLA-J-203ENST00000494367 OSCARQ8IYS5 282 aa31.44■■■□□ 2.62
HLA-J-203ENST00000494367 WDR62O43379 1518 aa31.43■■■□□ 2.62
HLA-J-203ENST00000494367 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
HLA-J-203ENST00000494367 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
HLA-J-203ENST00000494367 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
HLA-J-203ENST00000494367 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
HLA-J-203ENST00000494367 WIZO95785 1651 aa31.14■■■□□ 2.58
HLA-J-203ENST00000494367 CEP164Q9UPV0 1460 aa31.09■■■□□ 2.57
HLA-J-203ENST00000494367 RSF1Q96T23 1441 aaPredicted RBP30.99■■■□□ 2.55
HLA-J-203ENST00000494367 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
HLA-J-203ENST00000494367 AEBP2Q6ZN18 517 aaPredicted RBP30.94■■■□□ 2.54
HLA-J-203ENST00000494367 FANCD2Q9BXW9 1451 aa30.93■■■□□ 2.54
HLA-J-203ENST00000494367 TRHP20396 242 aaPredicted RBP30.9■■■□□ 2.54
HLA-J-203ENST00000494367 CYB5RLQ6IPT4 315 aa30.8■■■□□ 2.52
HLA-J-203ENST00000494367 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
HLA-J-203ENST00000494367 URB2Q14146 1524 aaKnown RBP30.74■■■□□ 2.51
HLA-J-203ENST00000494367 CFTRP13569 1480 aa30.71■■■□□ 2.51
HLA-J-203ENST00000494367 ARAP1Q96P48 1450 aa30.57■■■□□ 2.48
HLA-J-203ENST00000494367 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.48
HLA-J-203ENST00000494367 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
HLA-J-203ENST00000494367 CCDC88BA6NC98 1476 aa30.46■■■□□ 2.47
HLA-J-203ENST00000494367 CHD1O14646 1710 aa30.42■■■□□ 2.46
HLA-J-203ENST00000494367 EIF4G3O43432 1585 aaKnown RBP30.39■■■□□ 2.46
HLA-J-203ENST00000494367 PRDM2Q13029 1718 aa30.35■■■□□ 2.45
HLA-J-203ENST00000494367 FBLN2P98095 1184 aa30.2■■■□□ 2.43
HLA-J-203ENST00000494367 TOPBP1Q92547 1522 aa30.2■■■□□ 2.42
HLA-J-203ENST00000494367 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.41
HLA-J-203ENST00000494367 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
HLA-J-203ENST00000494367 TARBP1Q13395 1621 aaKnown RBP30.05■■■□□ 2.4
HLA-J-203ENST00000494367 DNMBPQ6XZF7 1577 aa30■■■□□ 2.39
HLA-J-203ENST00000494367 CLASP1Q7Z460 1538 aa30■■■□□ 2.39
HLA-J-203ENST00000494367 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
HLA-J-203ENST00000494367 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
HLA-J-203ENST00000494367 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
HLA-J-203ENST00000494367 GAPVD1Q14C86 1478 aa29.77■■■□□ 2.36
HLA-J-203ENST00000494367 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
HLA-J-203ENST00000494367 ILDR1Q86SU0 546 aaPredicted RBP29.75■■■□□ 2.35
HLA-J-203ENST00000494367 TDRD9Q8NDG6 1382 aaKnown RBP29.74■■■□□ 2.35
HLA-J-203ENST00000494367 RAD54L2Q9Y4B4 1467 aa29.72■■■□□ 2.35
HLA-J-203ENST00000494367 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
HLA-J-203ENST00000494367 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
HLA-J-203ENST00000494367 SOGA1O94964 1423 aa29.67■■■□□ 2.34
HLA-J-203ENST00000494367 WDR97A6NE52 1622 aa29.67■■■□□ 2.34
HLA-J-203ENST00000494367 CUX1P39880 1505 aa29.61■■■□□ 2.33
HLA-J-203ENST00000494367 SYNJ2O15056 1496 aa29.6■■■□□ 2.33
HLA-J-203ENST00000494367 FGD5Q6ZNL6 1462 aa29.59■■■□□ 2.33
HLA-J-203ENST00000494367 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
HLA-J-203ENST00000494367 KIF13AQ9H1H9 1805 aa29.51■■■□□ 2.31
HLA-J-203ENST00000494367 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
HLA-J-203ENST00000494367 PBRM1Q86U86 1689 aa29.42■■■□□ 2.3
HLA-J-203ENST00000494367 KDM4FA0A1W2PPD8 638 aa29.33■■■□□ 2.29
HLA-J-203ENST00000494367 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
HLA-J-203ENST00000494367 CEP170Q5SW79 1584 aa29.27■■■□□ 2.28
HLA-J-203ENST00000494367 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
HLA-J-203ENST00000494367 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
HLA-J-203ENST00000494367 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
HLA-J-203ENST00000494367 BIVM-ERCC5R4GMW8 1640 aa29.19■■■□□ 2.26
HLA-J-203ENST00000494367 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
HLA-J-203ENST00000494367 KDM6BO15054 1643 aa29.15■■■□□ 2.26
HLA-J-203ENST00000494367 SHROOM2Q13796 1616 aa29.15■■■□□ 2.26
HLA-J-203ENST00000494367 FAM69CQ0P6D2 419 aa29.14■■■□□ 2.26
HLA-J-203ENST00000494367 ABCC10Q5T3U5 1492 aa29.12■■■□□ 2.25
HLA-J-203ENST00000494367 NUP160Q12769 1436 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms