RNA–Protein interactions for RNA: ENST00000440089.1

AC105339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC105339.1, Length 1,362 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.1-201ENST00000440089 NISCHQ9Y2I1 1504 aa41.23■■■■■ 4.19
AC105339.1-201ENST00000440089 CCDC180Q9P1Z9 1646 aa36.97■■■■□ 3.51
AC105339.1-201ENST00000440089 ABCC9O60706 1549 aa36.76■■■■□ 3.48
AC105339.1-201ENST00000440089 RB1CC1Q8TDY2 1594 aa35.12■■■■□ 3.21
AC105339.1-201ENST00000440089 NACADO15069 1562 aa34.93■■■■□ 3.18
AC105339.1-201ENST00000440089 DCAF8L2P0C7V8 631 aa34.63■■■■□ 3.13
AC105339.1-201ENST00000440089 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
AC105339.1-201ENST00000440089 DNAJC5BQ9UF47 199 aa34.35■■■■□ 3.09
AC105339.1-201ENST00000440089 UNC13AQ9UPW8 1703 aa34.26■■■■□ 3.08
AC105339.1-201ENST00000440089 PABPN1Q86U42 306 aaKnown RBP eCLIP34.23■■■■□ 3.07
AC105339.1-201ENST00000440089 ZCCHC6Q5VYS8 1495 aaKnown RBP34.21■■■■□ 3.07
AC105339.1-201ENST00000440089 DCAF1Q9Y4B6 1507 aa34.13■■■■□ 3.05
AC105339.1-201ENST00000440089 BICRAQ9NZM4 1560 aa34.06■■■■□ 3.04
AC105339.1-201ENST00000440089 SHROOM4Q9ULL8 1493 aa33.73■■■□□ 2.99
AC105339.1-201ENST00000440089 SCRIBQ14160 1630 aa33.62■■■□□ 2.97
AC105339.1-201ENST00000440089 CC2D2AQ9P2K1 1620 aa33.24■■■□□ 2.91
AC105339.1-201ENST00000440089 EIF4G1Q04637 1599 aaKnown RBP33.23■■■□□ 2.91
AC105339.1-201ENST00000440089 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
AC105339.1-201ENST00000440089 NCAPD3P42695 1498 aa32.25■■■□□ 2.75
AC105339.1-201ENST00000440089 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
AC105339.1-201ENST00000440089 SMARCA4P51532 1647 aa32.13■■■□□ 2.73
AC105339.1-201ENST00000440089 SMARCA2P51531 1590 aa32.08■■■□□ 2.73
AC105339.1-201ENST00000440089 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
AC105339.1-201ENST00000440089 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
AC105339.1-201ENST00000440089 PEG3Q9GZU2 1588 aa31.87■■■□□ 2.69
AC105339.1-201ENST00000440089 BAZ1BQ9UIG0 1483 aaKnown RBP31.83■■■□□ 2.69
AC105339.1-201ENST00000440089 ERCC6Q03468 1493 aa31.76■■■□□ 2.67
AC105339.1-201ENST00000440089 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
AC105339.1-201ENST00000440089 CUX2O14529 1486 aa31.71■■■□□ 2.67
AC105339.1-201ENST00000440089 NESP48681 1621 aa31.61■■■□□ 2.65
AC105339.1-201ENST00000440089 DNAJC5Q9H3Z4 198 aa31.51■■■□□ 2.63
AC105339.1-201ENST00000440089 LAMC3Q9Y6N6 1575 aa31.49■■■□□ 2.63
AC105339.1-201ENST00000440089 WIZO95785 1651 aa31.35■■■□□ 2.61
AC105339.1-201ENST00000440089 THOC2Q8NI27 1593 aaKnown RBP31.32■■■□□ 2.6
AC105339.1-201ENST00000440089 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
AC105339.1-201ENST00000440089 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
AC105339.1-201ENST00000440089 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
AC105339.1-201ENST00000440089 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
AC105339.1-201ENST00000440089 MRC2Q9UBG0 1479 aa31.01■■■□□ 2.55
AC105339.1-201ENST00000440089 TOP2AP11388 1531 aaKnown RBP31.01■■■□□ 2.55
AC105339.1-201ENST00000440089 WDR62O43379 1518 aa30.94■■■□□ 2.54
AC105339.1-201ENST00000440089 CFTRP13569 1480 aa30.93■■■□□ 2.54
AC105339.1-201ENST00000440089 CEP164Q9UPV0 1460 aa30.91■■■□□ 2.54
AC105339.1-201ENST00000440089 FANCD2Q9BXW9 1451 aa30.88■■■□□ 2.53
AC105339.1-201ENST00000440089 CCDC88BA6NC98 1476 aa30.63■■■□□ 2.49
AC105339.1-201ENST00000440089 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
AC105339.1-201ENST00000440089 URB2Q14146 1524 aaKnown RBP30.61■■■□□ 2.49
AC105339.1-201ENST00000440089 TOPBP1Q92547 1522 aa30.3■■■□□ 2.44
AC105339.1-201ENST00000440089 ABCC8Q09428 1581 aa30.3■■■□□ 2.44
AC105339.1-201ENST00000440089 IFT140Q96RY7 1462 aa30.3■■■□□ 2.44
AC105339.1-201ENST00000440089 OSCARQ8IYS5 282 aa30.25■■■□□ 2.43
AC105339.1-201ENST00000440089 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
AC105339.1-201ENST00000440089 ZNF608Q9ULD9 1512 aaPredicted RBP30.19■■■□□ 2.42
AC105339.1-201ENST00000440089 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
AC105339.1-201ENST00000440089 EIF4G3O43432 1585 aaKnown RBP30.06■■■□□ 2.4
AC105339.1-201ENST00000440089 TARBP1Q13395 1621 aaKnown RBP30.03■■■□□ 2.4
AC105339.1-201ENST00000440089 POLA1P09884 1462 aaPredicted RBP30.01■■■□□ 2.39
AC105339.1-201ENST00000440089 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.38
AC105339.1-201ENST00000440089 SOGA1O94964 1423 aa29.87■■■□□ 2.37
AC105339.1-201ENST00000440089 RAD54L2Q9Y4B4 1467 aa29.86■■■□□ 2.37
AC105339.1-201ENST00000440089 FGD5Q6ZNL6 1462 aa29.83■■■□□ 2.37
AC105339.1-201ENST00000440089 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.36
AC105339.1-201ENST00000440089 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.36
AC105339.1-201ENST00000440089 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.36
AC105339.1-201ENST00000440089 CUX1P39880 1505 aa29.82■■■□□ 2.36
AC105339.1-201ENST00000440089 WDR97A6NE52 1622 aa29.81■■■□□ 2.36
AC105339.1-201ENST00000440089 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
AC105339.1-201ENST00000440089 CHD1O14646 1710 aa29.77■■■□□ 2.36
AC105339.1-201ENST00000440089 ARHGEF11O15085 1522 aa29.76■■■□□ 2.35
AC105339.1-201ENST00000440089 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
AC105339.1-201ENST00000440089 FBLN2P98095 1184 aa29.67■■■□□ 2.34
AC105339.1-201ENST00000440089 SNAPC4Q5SXM2 1469 aa29.65■■■□□ 2.34
AC105339.1-201ENST00000440089 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
AC105339.1-201ENST00000440089 GRIN2BQ13224 1484 aa29.62■■■□□ 2.33
AC105339.1-201ENST00000440089 ABCA10Q8WWZ4 1543 aa29.53■■■□□ 2.32
AC105339.1-201ENST00000440089 CHMP7Q8WUX9 453 aaPredicted RBP29.52■■■□□ 2.32
AC105339.1-201ENST00000440089 SYNJ2O15056 1496 aa29.51■■■□□ 2.32
AC105339.1-201ENST00000440089 GAPVD1Q14C86 1478 aa29.51■■■□□ 2.32
AC105339.1-201ENST00000440089 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
AC105339.1-201ENST00000440089 CYB5RLQ6IPT4 315 aa29.49■■■□□ 2.31
AC105339.1-201ENST00000440089 SYNJ1O43426 1573 aa29.49■■■□□ 2.31
AC105339.1-201ENST00000440089 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
AC105339.1-201ENST00000440089 PBRM1Q86U86 1689 aa29.47■■■□□ 2.31
AC105339.1-201ENST00000440089 ABCA5Q8WWZ7 1642 aa29.46■■■□□ 2.31
AC105339.1-201ENST00000440089 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
AC105339.1-201ENST00000440089 TOP2BQ02880 1626 aa29.4■■■□□ 2.3
AC105339.1-201ENST00000440089 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
AC105339.1-201ENST00000440089 GRIN2AQ12879 1464 aa29.23■■■□□ 2.27
AC105339.1-201ENST00000440089 ADAMTS12P58397 1594 aa29.23■■■□□ 2.27
AC105339.1-201ENST00000440089 ERICH3Q5RHP9 1530 aa29.17■■■□□ 2.26
AC105339.1-201ENST00000440089 FHAD1B1AJZ9 1412 aa29.16■■■□□ 2.26
AC105339.1-201ENST00000440089 NUP160Q12769 1436 aa29.15■■■□□ 2.26
AC105339.1-201ENST00000440089 TRHP20396 242 aaPredicted RBP29.12■■■□□ 2.25
AC105339.1-201ENST00000440089 CEP170Q5SW79 1584 aa29.1■■■□□ 2.25
AC105339.1-201ENST00000440089 SHROOM2Q13796 1616 aa28.99■■■□□ 2.23
AC105339.1-201ENST00000440089 ERCC6L2Q5T890 1561 aa28.98■■■□□ 2.23
AC105339.1-201ENST00000440089 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
AC105339.1-201ENST00000440089 RUSC2Q8N2Y8 1516 aa28.82■■■□□ 2.2
AC105339.1-201ENST00000440089 PRG4Q92954 1404 aaPredicted RBP28.81■■■□□ 2.2
AC105339.1-201ENST00000440089 JPH4Q96JJ6 628 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms