RNA–Protein interactions for RNA: ENST00000444321.2

CHRDL1-204, Transcript of chordin like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHRDL1, Length 1,658 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1-204ENST00000444321 NISCHQ9Y2I1 1504 aa37.83■■■■□ 3.65
CHRDL1-204ENST00000444321 CCDC180Q9P1Z9 1646 aa33.43■■■□□ 2.94
CHRDL1-204ENST00000444321 ABCC9O60706 1549 aa32.56■■■□□ 2.8
CHRDL1-204ENST00000444321 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
CHRDL1-204ENST00000444321 DCAF8L2P0C7V8 631 aa31.51■■■□□ 2.63
CHRDL1-204ENST00000444321 NACADO15069 1562 aa31.44■■■□□ 2.62
CHRDL1-204ENST00000444321 RB1CC1Q8TDY2 1594 aa31.38■■■□□ 2.61
CHRDL1-204ENST00000444321 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
CHRDL1-204ENST00000444321 DCAF1Q9Y4B6 1507 aa31.32■■■□□ 2.6
CHRDL1-204ENST00000444321 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
CHRDL1-204ENST00000444321 SCRIBQ14160 1630 aa30.53■■■□□ 2.48
CHRDL1-204ENST00000444321 PABPN1Q86U42 306 aaKnown RBP eCLIP30.52■■■□□ 2.48
CHRDL1-204ENST00000444321 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
CHRDL1-204ENST00000444321 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
CHRDL1-204ENST00000444321 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
CHRDL1-204ENST00000444321 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
CHRDL1-204ENST00000444321 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
CHRDL1-204ENST00000444321 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
CHRDL1-204ENST00000444321 BAZ1AQ9NRL2 1556 aaPredicted RBP29.27■■■□□ 2.28
CHRDL1-204ENST00000444321 SMARCA4P51532 1647 aa29.25■■■□□ 2.27
CHRDL1-204ENST00000444321 MROH2BQ7Z745 1585 aa29.16■■■□□ 2.26
CHRDL1-204ENST00000444321 ATAD2BQ9ULI0 1458 aa29.1■■■□□ 2.25
CHRDL1-204ENST00000444321 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
CHRDL1-204ENST00000444321 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
CHRDL1-204ENST00000444321 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.23
CHRDL1-204ENST00000444321 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
CHRDL1-204ENST00000444321 HMGXB3Q12766 1538 aa28.88■■■□□ 2.21
CHRDL1-204ENST00000444321 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
CHRDL1-204ENST00000444321 WIZO95785 1651 aa28.8■■■□□ 2.2
CHRDL1-204ENST00000444321 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
CHRDL1-204ENST00000444321 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
CHRDL1-204ENST00000444321 NESP48681 1621 aa28.26■■■□□ 2.11
CHRDL1-204ENST00000444321 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
CHRDL1-204ENST00000444321 CADPSQ9ULU8 1353 aa28.23■■■□□ 2.11
CHRDL1-204ENST00000444321 LAMC3Q9Y6N6 1575 aa28.19■■■□□ 2.1
CHRDL1-204ENST00000444321 CFTRP13569 1480 aa28.11■■■□□ 2.09
CHRDL1-204ENST00000444321 PDS5BQ9NTI5 1447 aa28.03■■■□□ 2.08
CHRDL1-204ENST00000444321 ERCC6Q03468 1493 aa28■■■□□ 2.07
CHRDL1-204ENST00000444321 FANCD2Q9BXW9 1451 aa27.87■■■□□ 2.05
CHRDL1-204ENST00000444321 KIF21AQ7Z4S6 1674 aa27.84■■■□□ 2.05
CHRDL1-204ENST00000444321 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
CHRDL1-204ENST00000444321 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
CHRDL1-204ENST00000444321 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
CHRDL1-204ENST00000444321 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.03
CHRDL1-204ENST00000444321 CUX2O14529 1486 aa27.66■■■□□ 2.02
CHRDL1-204ENST00000444321 WDR62O43379 1518 aa27.61■■■□□ 2.01
CHRDL1-204ENST00000444321 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
CHRDL1-204ENST00000444321 ABCC8Q09428 1581 aa27.45■■□□□ 1.99
CHRDL1-204ENST00000444321 TOPBP1Q92547 1522 aa27.44■■□□□ 1.98
CHRDL1-204ENST00000444321 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
CHRDL1-204ENST00000444321 CUX1P39880 1505 aa27.33■■□□□ 1.97
CHRDL1-204ENST00000444321 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
CHRDL1-204ENST00000444321 POLA1P09884 1462 aaPredicted RBP27.24■■□□□ 1.95
CHRDL1-204ENST00000444321 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
CHRDL1-204ENST00000444321 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
CHRDL1-204ENST00000444321 SOGA1O94964 1423 aa27.14■■□□□ 1.94
CHRDL1-204ENST00000444321 SYNJ1O43426 1573 aa27.13■■□□□ 1.93
CHRDL1-204ENST00000444321 TOP2BQ02880 1626 aa27.13■■□□□ 1.93
CHRDL1-204ENST00000444321 RAD54L2Q9Y4B4 1467 aa27.12■■□□□ 1.93
CHRDL1-204ENST00000444321 TARBP1Q13395 1621 aaKnown RBP27.11■■□□□ 1.93
CHRDL1-204ENST00000444321 BIVM-ERCC5R4GMW8 1640 aa27.1■■□□□ 1.93
CHRDL1-204ENST00000444321 ZNF608Q9ULD9 1512 aaPredicted RBP27.09■■□□□ 1.93
CHRDL1-204ENST00000444321 AQRO60306 1485 aaKnown RBP eCLIP26.98■■□□□ 1.91
CHRDL1-204ENST00000444321 TDRD9Q8NDG6 1382 aaKnown RBP26.97■■□□□ 1.91
CHRDL1-204ENST00000444321 ABCA10Q8WWZ4 1543 aa26.96■■□□□ 1.91
CHRDL1-204ENST00000444321 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
CHRDL1-204ENST00000444321 WDR97A6NE52 1622 aa26.89■■□□□ 1.9
CHRDL1-204ENST00000444321 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
CHRDL1-204ENST00000444321 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
CHRDL1-204ENST00000444321 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
CHRDL1-204ENST00000444321 GRIN2BQ13224 1484 aa26.77■■□□□ 1.88
CHRDL1-204ENST00000444321 SNAPC4Q5SXM2 1469 aa26.69■■□□□ 1.86
CHRDL1-204ENST00000444321 MAGI1Q96QZ7 1491 aaPredicted RBP26.67■■□□□ 1.86
CHRDL1-204ENST00000444321 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
CHRDL1-204ENST00000444321 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
CHRDL1-204ENST00000444321 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
CHRDL1-204ENST00000444321 ERICH3Q5RHP9 1530 aa26.62■■□□□ 1.85
CHRDL1-204ENST00000444321 DNAJC5Q9H3Z4 198 aa26.62■■□□□ 1.85
CHRDL1-204ENST00000444321 OSCARQ8IYS5 282 aa26.61■■□□□ 1.85
CHRDL1-204ENST00000444321 IGF1RP08069 1367 aa26.59■■□□□ 1.85
CHRDL1-204ENST00000444321 SYNJ2O15056 1496 aa26.58■■□□□ 1.84
CHRDL1-204ENST00000444321 FBLN2P98095 1184 aa26.57■■□□□ 1.84
CHRDL1-204ENST00000444321 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
CHRDL1-204ENST00000444321 FHAD1B1AJZ9 1412 aa26.52■■□□□ 1.84
CHRDL1-204ENST00000444321 RUSC2Q8N2Y8 1516 aa26.52■■□□□ 1.84
CHRDL1-204ENST00000444321 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
CHRDL1-204ENST00000444321 CHD1O14646 1710 aa26.49■■□□□ 1.83
CHRDL1-204ENST00000444321 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
CHRDL1-204ENST00000444321 CARMIL1Q5VZK9 1371 aa26.4■■□□□ 1.82
CHRDL1-204ENST00000444321 CUL7Q14999 1698 aa26.36■■□□□ 1.81
CHRDL1-204ENST00000444321 NUP160Q12769 1436 aa26.34■■□□□ 1.81
CHRDL1-204ENST00000444321 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
CHRDL1-204ENST00000444321 EEA1Q15075 1411 aa26.3■■□□□ 1.8
CHRDL1-204ENST00000444321 CSRNP3Q8WYN3 585 aa26.28■■□□□ 1.8
CHRDL1-204ENST00000444321 CEP170Q5SW79 1584 aa26.27■■□□□ 1.8
CHRDL1-204ENST00000444321 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
CHRDL1-204ENST00000444321 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
CHRDL1-204ENST00000444321 FAM9AQ8IZU1 332 aaPredicted RBP26.19■■□□□ 1.78
CHRDL1-204ENST00000444321 ARHGEF11O15085 1522 aa26.13■■□□□ 1.77
CHRDL1-204ENST00000444321 KIAA0586Q9BVV6 1533 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms